CircRNA Information

General Information
circRNA Basic Information
CircID chr20:17227060|17227276
Strand -
CircType exon
Host Gene ENSG00000125851.8;
Algorism CIRI2;
Sequence ACAGCTCCCCACATTCGCACCCCTGCCCGCGCGCCGGGCCGCCTGACTGCACGGCTTCCCCTCCAGCCAGATGCTGGAGAACACACACTGATTCGCTGCTTTCCAAGACCCTGTTCAGTCTCTTTCTCTATACAAAGATTTTTTTAAAAACTATATATAAGAATTCTTTATTTGCACCCTCCCTCCGAGTCCCCTGCTCCGCCAGCCTGCGCGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:17227060|17227276 hsa-miR-19a-5p 0 0 1
chr20:17227060|17227276 hsa-miR-19a-3p 0 0 1
chr20:17227060|17227276 hsa-miR-149-5p 0 0 1
chr20:17227060|17227276 hsa-miR-149-3p 0 0 1
chr20:17227060|17227276 hsa-miR-186-5p 0 0 1
chr20:17227060|17227276 hsa-miR-186-3p 0 0 1
chr20:17227060|17227276 hsa-miR-432-5p 0 0 1
chr20:17227060|17227276 hsa-miR-432-3p 0 0 1
chr20:17227060|17227276 hsa-miR-503-5p 0 0 1
chr20:17227060|17227276 hsa-miR-503-3p 0 0 1
chr20:17227060|17227276 hsa-miR-568 0 0 1
chr20:17227060|17227276 hsa-miR-766-5p 0 0 1
chr20:17227060|17227276 hsa-miR-766-3p 0 0 1
chr20:17227060|17227276 hsa-miR-920 0 1 1
chr20:17227060|17227276 hsa-miR-939-5p 0 0 1
chr20:17227060|17227276 hsa-miR-939-3p 0 0 1
chr20:17227060|17227276 hsa-miR-1182 1 1 1
chr20:17227060|17227276 hsa-miR-1321 0 0 1
chr20:17227060|17227276 hsa-miR-671-5p 1 1 1
chr20:17227060|17227276 hsa-miR-491-5p 0 0 1
chr20:17227060|17227276 hsa-miR-299-3p 0 0 1
chr20:17227060|17227276 hsa-miR-193a-5p 1 1 1
chr20:17227060|17227276 hsa-miR-338-3p 0 0 1
chr20:17227060|17227276 hsa-miR-1207-5p 1 1 1
chr20:17227060|17227276 hsa-miR-342-5p 1 1 1
chr20:17227060|17227276 hsa-miR-515-5p 0 0 1
chr20:17227060|17227276 hsa-miR-548c-3p 0 0 1
chr20:17227060|17227276 hsa-miR-19b 0 0 1
chr20:17227060|17227276 hsa-miR-206 1 0 0
chr20:17227060|17227276 hsa-miR-608 1 0 0
chr20:17227060|17227276 hsa-miR-612 1 0 0
chr20:17227060|17227276 hsa-miR-637 1 0 0
chr20:17227060|17227276 hsa-miR-663a 1 0 0
chr20:17227060|17227276 hsa-miR-762 1 0 0
chr20:17227060|17227276 hsa-miR-890 1 0 0
chr20:17227060|17227276 hsa-miR-663b 1 0 0
chr20:17227060|17227276 hsa-miR-1268a 1 0 0
chr20:17227060|17227276 hsa-miR-1469 1 1 0
chr20:17227060|17227276 hsa-miR-1471 1 0 0
chr20:17227060|17227276 hsa-miR-2861 1 0 0
chr20:17227060|17227276 hsa-miR-3132 1 0 0
chr20:17227060|17227276 hsa-miR-3138 1 0 0
chr20:17227060|17227276 hsa-miR-3141 1 0 0
chr20:17227060|17227276 hsa-miR-3154 1 0 0
chr20:17227060|17227276 hsa-miR-3197 0 1 0
chr20:17227060|17227276 hsa-miR-4311 0 1 0
chr20:17227060|17227276 hsa-miR-3621 1 0 0
chr20:17227060|17227276 hsa-miR-3652 0 1 0
chr20:17227060|17227276 hsa-miR-3916 0 1 0
chr20:17227060|17227276 hsa-miR-3936 1 0 0
chr20:17227060|17227276 hsa-miR-3937 1 1 0
chr20:17227060|17227276 hsa-miR-1268b 1 0 0
chr20:17227060|17227276 hsa-miR-4427 0 1 0
chr20:17227060|17227276 hsa-miR-4430 1 1 0
chr20:17227060|17227276 hsa-miR-4450 1 1 0
chr20:17227060|17227276 hsa-miR-3135b 0 1 0
chr20:17227060|17227276 hsa-miR-4462 1 0 0
chr20:17227060|17227276 hsa-miR-4466 1 0 0
chr20:17227060|17227276 hsa-miR-4479 1 0 0
chr20:17227060|17227276 hsa-miR-4481 1 0 0
chr20:17227060|17227276 hsa-miR-4488 1 0 0
chr20:17227060|17227276 hsa-miR-4498 1 1 0
chr20:17227060|17227276 hsa-miR-4505 1 0 0
chr20:17227060|17227276 hsa-miR-4510 1 0 0
chr20:17227060|17227276 hsa-miR-4514 1 0 0
chr20:17227060|17227276 hsa-miR-4516 1 0 0
chr20:17227060|17227276 hsa-miR-1587 1 0 0
chr20:17227060|17227276 hsa-miR-3978 1 1 0
chr20:17227060|17227276 hsa-miR-4634 1 0 0
chr20:17227060|17227276 hsa-miR-4651 1 0 0
chr20:17227060|17227276 hsa-miR-4688 1 0 0
chr20:17227060|17227276 hsa-miR-4706 1 0 0
chr20:17227060|17227276 hsa-miR-4721 1 0 0
chr20:17227060|17227276 hsa-miR-4730 0 1 0
chr20:17227060|17227276 hsa-miR-4734 1 0 0
chr20:17227060|17227276 hsa-miR-4739 1 0 0
chr20:17227060|17227276 hsa-miR-4741 1 0 0
chr20:17227060|17227276 hsa-miR-5090 1 0 0
chr20:17227060|17227276 hsa-miR-5572 1 0 0
chr20:17227060|17227276 hsa-miR-5787 1 0 0
chr20:17227060|17227276 hsa-miR-6081 1 0 0
chr20:17227060|17227276 hsa-miR-6090 1 0 0
chr20:17227060|17227276 hsa-miR-6125 1 0 0
chr20:17227060|17227276 hsa-miR-6127 1 1 0
chr20:17227060|17227276 hsa-miR-6129 1 0 0
chr20:17227060|17227276 hsa-miR-6132 1 0 0
chr20:17227060|17227276 hsa-miR-6133 1 0 0
chr20:17227060|17227276 hsa-miR-6165 1 0 0
chr20:17227060|17227276 hsa-miR-6860 1 0 0
chr20:17227060|17227276 hsa-miR-7150 1 0 0
chr20:17227060|17227276 hsa-miR-8052 1 0 0
chr20:17227060|17227276 hsa-miR-8089 1 0 0
chr20:17227060|17227276 hsa-miR-12115 1 0 0
chr20:17227060|17227276 hsa-miR-26b-3p 0 1 0
chr20:17227060|17227276 hsa-miR-504-3p 1 0 0
chr20:17227060|17227276 hsa-miR-6747-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4433a-3p 1 0 0
chr20:17227060|17227276 hsa-miR-6765-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6825-5p 1 1 0
chr20:17227060|17227276 hsa-miR-4687-3p 1 0 0
chr20:17227060|17227276 hsa-miR-25-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6799-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6510-5p 1 1 0
chr20:17227060|17227276 hsa-miR-8071 1 0 0
chr20:17227060|17227276 hsa-miR-6515-5p 1 1 0
chr20:17227060|17227276 hsa-miR-6089 1 0 0
chr20:17227060|17227276 hsa-miR-6880-5p 1 0 0
chr20:17227060|17227276 hsa-miR-7847-3p 1 0 0
chr20:17227060|17227276 hsa-miR-4722-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6727-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6721-5p 1 1 0
chr20:17227060|17227276 hsa-miR-197-5p 1 0 0
chr20:17227060|17227276 hsa-miR-7845-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6732-5p 1 0 0
chr20:17227060|17227276 hsa-miR-3190-3p 1 0 0
chr20:17227060|17227276 hsa-miR-6805-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6798-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6760-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6782-5p 1 1 0
chr20:17227060|17227276 hsa-miR-1226-5p 1 0 0
chr20:17227060|17227276 hsa-miR-3944-3p 1 0 0
chr20:17227060|17227276 hsa-miR-4786-3p 1 0 0
chr20:17227060|17227276 hsa-miR-4783-3p 1 0 0
chr20:17227060|17227276 hsa-miR-4640-5p 1 0 0
chr20:17227060|17227276 hsa-miR-885-3p 1 0 0
chr20:17227060|17227276 hsa-miR-1908-5p 1 0 0
chr20:17227060|17227276 hsa-miR-1228-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6823-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4783-5p 1 0 0
chr20:17227060|17227276 hsa-miR-877-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4732-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4787-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4446-3p 1 0 0
chr20:17227060|17227276 hsa-miR-6824-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6789-5p 1 0 0
chr20:17227060|17227276 hsa-miR-7850-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6892-5p 1 0 0
chr20:17227060|17227276 hsa-miR-7112-5p 1 1 0
chr20:17227060|17227276 hsa-miR-7846-3p 1 0 0
chr20:17227060|17227276 hsa-miR-4707-5p 1 0 0
chr20:17227060|17227276 hsa-miR-1307-3p 1 0 0
chr20:17227060|17227276 hsa-miR-873-3p 1 1 0
chr20:17227060|17227276 hsa-miR-744-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6832-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4750-5p 1 0 0
chr20:17227060|17227276 hsa-miR-2277-5p 1 1 0
chr20:17227060|17227276 hsa-miR-10400-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4763-3p 1 1 0
chr20:17227060|17227276 hsa-miR-6787-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6812-5p 0 1 0
chr20:17227060|17227276 hsa-miR-6816-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6775-5p 1 1 0
chr20:17227060|17227276 hsa-miR-1343-5p 1 0 0
chr20:17227060|17227276 hsa-miR-5001-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6743-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6752-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6754-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6803-5p 1 0 0
chr20:17227060|17227276 hsa-miR-7107-5p 1 0 0
chr20:17227060|17227276 hsa-miR-7110-5p 1 0 0
chr20:17227060|17227276 hsa-miR-1249-5p 1 1 0
chr20:17227060|17227276 hsa-miR-6722-3p 1 1 0
chr20:17227060|17227276 hsa-miR-6774-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6779-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6780a-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6797-5p 1 1 0
chr20:17227060|17227276 hsa-miR-6808-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6879-5p 1 0 0
chr20:17227060|17227276 hsa-miR-3620-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4728-5p 1 0 0
chr20:17227060|17227276 hsa-miR-5196-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6780b-5p 1 1 0
chr20:17227060|17227276 hsa-miR-6836-5p 1 0 0
chr20:17227060|17227276 hsa-miR-10396a-5p 1 0 0
chr20:17227060|17227276 hsa-miR-10396b-5p 1 0 0
chr20:17227060|17227276 hsa-miR-1237-5p 1 0 0
chr20:17227060|17227276 hsa-miR-1909-3p 1 1 0
chr20:17227060|17227276 hsa-miR-328-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4649-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4725-3p 1 1 0
chr20:17227060|17227276 hsa-miR-4745-3p 1 1 0
chr20:17227060|17227276 hsa-miR-6729-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6738-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6794-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6795-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6846-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6848-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6883-5p 1 1 0
chr20:17227060|17227276 hsa-miR-6887-5p 1 0 0
chr20:17227060|17227276 hsa-miR-3187-5p 1 0 0
chr20:17227060|17227276 hsa-miR-4436b-3p 1 0 0
chr20:17227060|17227276 hsa-miR-10394-3p 1 0 0
chr20:17227060|17227276 hsa-miR-365a-5p 1 0 0
chr20:17227060|17227276 hsa-miR-365b-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6511b-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6731-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6739-5p 1 1 0
chr20:17227060|17227276 hsa-miR-7151-3p 1 0 0
chr20:17227060|17227276 hsa-miR-4646-5p 1 0 0
chr20:17227060|17227276 hsa-miR-6785-5p 1 1 0
chr20:17227060|17227276 hsa-miR-9851-5p 1 0 0
chr20:17227060|17227276 hsa-miR-7156-5p 0 1 0
chr20:17227060|17227276 hsa-miR-3136-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:17227060|17227276
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MTARLPLQPDAGEHTLIRCFPRPCSVSFSIQRFF
Nucleotide Sequence CTGACTGCACGGCTTCCCCTCCAGCCAGATGCTGGAGAACACACACTGATTCGCTGCTTTCCAAGACCCTGTTCAGTCTCTTTCTCTATACAAAGATTTTTTTAA
CircID chr20:17227060|17227276
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MLSKTLFSLFLYTKIFLKTIYKNSLFAPSLRVPCSASLRA
Nucleotide Sequence CTGCTTTCCAAGACCCTGTTCAGTCTCTTTCTCTATACAAAGATTTTTTTAAAAACTATATATAAGAATTCTTTATTTGCACCCTCCCTCCGAGTCCCCTGCTCCGCCAGCCTGCGCGCC
CircID chr20:17227060|17227276
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MAEQGTRREGANKEFLYIVFKKIFV
Nucleotide Sequence CTGGCGGAGCAGGGGACTCGGAGGGAGGGTGCAAATAAAGAATTCTTATATATAGTTTTTAAAAAAATCTTTGTATAG
CircID chr20:17227060|17227276
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MNRVLESSESVCVLQHLAGGEAVQSGGPARGQGCECGEL
Nucleotide Sequence CTGAACAGGGTCTTGGAAAGCAGCGAATCAGTGTGTGTTCTCCAGCATCTGGCTGGAGGGGAAGCCGTGCAGTCAGGCGGCCCGGCGCGCGGGCAGGGGTGCGAATGTGGGGAGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab