CircRNA Information

General Information
circRNA Basic Information
CircID chr20:19280959|19281087
Strand +
CircType exon
Host Gene ENSG00000185052.10;
Algorism CIRI2;
Sequence CTGGTTCGGTGCAGTTCTTGCTGTTCCGGAGTCCGGCATCTTCGGAAGTCAGAGTGTCGTTCACCTGCATCAGCTTCCTCGCCATCATCCACTTTCTGTCTTCCCCTACGAGGTCCATGAGGTCAAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:19280959|19281087 hsa-miR-192-5p 0 0 1
chr20:19280959|19281087 hsa-miR-192-3p 0 0 1
chr20:19280959|19281087 hsa-miR-215-5p 0 0 1
chr20:19280959|19281087 hsa-miR-215-3p 0 0 1
chr20:19280959|19281087 hsa-miR-345-5p 0 0 1
chr20:19280959|19281087 hsa-miR-345-3p 0 0 1
chr20:19280959|19281087 hsa-miR-492 0 0 1
chr20:19280959|19281087 hsa-miR-617 0 0 1
chr20:19280959|19281087 hsa-miR-657 0 0 1
chr20:19280959|19281087 hsa-miR-1255a 0 0 1
chr20:19280959|19281087 hsa-miR-125a-3p 0 0 1
chr20:19280959|19281087 hsa-miR-490-5p 1 0 1
chr20:19280959|19281087 hsa-miR-1255b 0 0 1
chr20:19280959|19281087 hsa-miR-7 0 0 1
chr20:19280959|19281087 hsa-miR-422a 0 1 0
chr20:19280959|19281087 hsa-miR-555 1 0 0
chr20:19280959|19281087 hsa-miR-663a 1 0 0
chr20:19280959|19281087 hsa-miR-765 1 0 0
chr20:19280959|19281087 hsa-miR-1275 1 0 0
chr20:19280959|19281087 hsa-miR-2861 1 0 0
chr20:19280959|19281087 hsa-miR-3125 1 0 0
chr20:19280959|19281087 hsa-miR-3131 1 0 0
chr20:19280959|19281087 hsa-miR-3138 1 0 0
chr20:19280959|19281087 hsa-miR-378c 1 0 0
chr20:19280959|19281087 hsa-miR-4271 1 0 0
chr20:19280959|19281087 hsa-miR-3911 1 0 0
chr20:19280959|19281087 hsa-miR-3916 1 0 0
chr20:19280959|19281087 hsa-miR-3929 0 1 0
chr20:19280959|19281087 hsa-miR-4510 1 0 0
chr20:19280959|19281087 hsa-miR-4535 0 1 0
chr20:19280959|19281087 hsa-miR-4688 1 0 0
chr20:19280959|19281087 hsa-miR-4706 1 0 0
chr20:19280959|19281087 hsa-miR-4710 1 0 0
chr20:19280959|19281087 hsa-miR-451b 0 1 0
chr20:19280959|19281087 hsa-miR-4737 1 0 0
chr20:19280959|19281087 hsa-miR-4739 1 0 0
chr20:19280959|19281087 hsa-miR-5090 1 0 0
chr20:19280959|19281087 hsa-miR-5698 1 0 0
chr20:19280959|19281087 hsa-miR-6125 1 0 0
chr20:19280959|19281087 hsa-miR-8075 1 0 0
chr20:19280959|19281087 hsa-miR-8085 1 0 0
chr20:19280959|19281087 hsa-miR-12115 1 0 0
chr20:19280959|19281087 hsa-miR-671-5p 1 0 0
chr20:19280959|19281087 hsa-miR-7106-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6825-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6894-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6799-5p 1 0 0
chr20:19280959|19281087 hsa-miR-766-5p 0 1 0
chr20:19280959|19281087 hsa-miR-7847-3p 1 0 0
chr20:19280959|19281087 hsa-miR-4695-5p 1 0 0
chr20:19280959|19281087 hsa-miR-7154-3p 1 0 0
chr20:19280959|19281087 hsa-miR-6741-5p 1 0 0
chr20:19280959|19281087 hsa-miR-3180-3p 1 0 0
chr20:19280959|19281087 hsa-miR-6732-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6805-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6798-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6760-5p 1 0 0
chr20:19280959|19281087 hsa-miR-3130-3p 0 1 0
chr20:19280959|19281087 hsa-miR-6782-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6835-5p 1 0 0
chr20:19280959|19281087 hsa-miR-3691-5p 1 0 0
chr20:19280959|19281087 hsa-miR-1908-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6824-5p 1 0 0
chr20:19280959|19281087 hsa-miR-5010-5p 1 0 0
chr20:19280959|19281087 hsa-miR-4776-5p 1 0 0
chr20:19280959|19281087 hsa-miR-3681-5p 1 0 0
chr20:19280959|19281087 hsa-miR-4714-5p 0 1 0
chr20:19280959|19281087 hsa-miR-1207-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6787-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6870-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6726-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6743-5p 1 0 0
chr20:19280959|19281087 hsa-miR-10401-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6879-5p 1 0 0
chr20:19280959|19281087 hsa-miR-7111-5p 1 0 0
chr20:19280959|19281087 hsa-miR-5196-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6780b-5p 1 0 0
chr20:19280959|19281087 hsa-miR-10396b-5p 1 0 0
chr20:19280959|19281087 hsa-miR-4649-5p 1 0 0
chr20:19280959|19281087 hsa-miR-4701-3p 1 0 0
chr20:19280959|19281087 hsa-miR-4725-3p 1 0 0
chr20:19280959|19281087 hsa-miR-6729-5p 1 0 0
chr20:19280959|19281087 hsa-miR-6794-5p 1 0 0
chr20:19280959|19281087 hsa-miR-4436b-3p 1 0 0
chr20:19280959|19281087 hsa-miR-4723-5p 1 0 0
chr20:19280959|19281087 hsa-miR-1910-3p 0 1 0
chr20:19280959|19281087 hsa-miR-6511a-5p 1 0 0
chr20:19280959|19281087 hsa-miR-4665-5p 1 0 0
chr20:19280959|19281087 hsa-miR-4716-3p 1 0 0
chr20:19280959|19281087 hsa-miR-6849-5p 0 1 0
chr20:19280959|19281087 hsa-miR-6884-5p 0 1 0
chr20:19280959|19281087 hsa-miR-10397-5p 1 0 0
chr20:19280959|19281087 hsa-miR-301a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:19280959|19281087
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence LVRCSSCCSGVRHLRKSECRSPASASSPSSTFCLPLRGP
Nucleotide Sequence CTGGTTCGGTGCAGTTCTTGCTGTTCCGGAGTCCGGCATCTTCGGAAGTCAGAGTGTCGTTCACCTGCATCAGCTTCCTCGCCATCATCCACTTTCTGTCTTCCCCTACGAGGTCCATGA
CircID chr20:19280959|19281087
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MLFRSPASSEVRVSFTCISFLAIIHFLSSPTRSMRSS
Nucleotide Sequence TTGCTGTTCCGGAGTCCGGCATCTTCGGAAGTCAGAGTGTCGTTCACCTGCATCAGCTTCCTCGCCATCATCCACTTTCTGTCTTCCCCTACGAGGTCCATGAGGTCAAGC
CircID chr20:19280959|19281087
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MDLVGEDRKWMMARKLMQVNDTLTSEDAGLRNSKNCTEP
Nucleotide Sequence ATGGACCTCGTAGGGGAAGACAGAAAGTGGATGATGGCGAGGAAGCTGATGCAGGTGAACGACACTCTGACTTCCGAAGATGCCGGACTCCGGAACAGCAAGAACTGCACCGAACCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab