CircRNA Information

General Information
circRNA Basic Information
CircID chr20:20495117|20591314
Strand -
CircType exon
Host Gene ENSG00000188559.13;
Algorism find_circ;CIRI2;DCC;
Sequence GTCAAAAGGCAGAAAACACACAGAATTCGAGTTCTTCAGAGCCTCAGCCTATTCAAGAGAATAAAGGACATGTGAAGAGAGAACATGAAGGAATAACA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:20495117|20591314 hsa-miR-22-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr20:20495117|20591314 FKBP4 0 1 0
chr20:20495117|20591314 HNRNPC 0 1 0
chr20:20495117|20591314 SRSF1 0 0 1
chr20:20495117|20591314 ELAVL1 1 1 0
chr20:20495117|20591314 DDX3X 2 0 0
chr20:20495117|20591314 U2AF2 2 2 0
chr20:20495117|20591314 DKC1 1 0 0
chr20:20495117|20591314 DDX54 0 0 2
chr20:20495117|20591314 FUS 2 0 0
chr20:20495117|20591314 PRPF8 0 1 0
chr20:20495117|20591314 TARDBP 1 2 0
chr20:20495117|20591314 TAF15 1 0 0
chr20:20495117|20591314 SF3A3 1 0 0
chr20:20495117|20591314 CPSF7 0 1 0
chr20:20495117|20591314 BUD13 1 0 0
chr20:20495117|20591314 PTBP1 0 9 0
chr20:20495117|20591314 IGF2BP2 0 0 2
chr20:20495117|20591314 AGO2 0 1 0
chr20:20495117|20591314 EIF4A3 1 1 2
chr20:20495117|20591314 NOP58 0 0 1