CircNet

General Information

circRNA Basic Information

CircID	chr20:20653530\|20680801
Strand	-
CircType	exon
Host Gene	ENSG00000188559.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATAATGTGGATGCAAATGATCTTAAGCAGTTTTTTGAGACCAACTATTCTCAGATATATTTCATCTTCTATGAAAATTTTATAGCACTGGAAAATAGTTTGAAATTAAAAGGGAATAATAAGTCACAAAGGGAGGAGCTGGACTCCATCCTCTTCCTTTTTGAAGTTTTTTGTTTTCTTGGTAGACAGATTGTCTATGAGTAAGGAGTGGACATACTTGCCAGTTGGTCTGCTTTCCGCCCTGAGTCAGCCTTCCAGTACATTGGGCTAATACCTCAATAATTTCAAGAAAATGACAGACCCTGCATTTGGTTCTGCCTAAAGATCAACTGTACAGCACACAGGAGGGAATTAAACTTGGGACAGTGATCTCTTTAAAACATTCAGAAAATACTGCAGTTTCTACCTGAACGAATTTTCTTTCGATGGCATTACCAGAGTATAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:20653530\|20680801
ORF Type	ORF1
Protein Length	66
Nucleotide Length	198
Protein Sequence	VDANDLKQFFETNYSQIYFIFYENFIALENSLKLKGNNKSQREELDSILFLFEVFCFLGRQIVYE*
Nucleotide Sequence	GTGGATGCAAATGATCTTAAGCAGTTTTTTGAGACCAACTATTCTCAGATATATTTCATCTTCTATGAAAATTTTATAGCACTGGAAAATAGTTTGAAATTAAAAGGGAATAATAAGTCACAAAGGGAGGAGCTGGACTCCATCCTCTTCCTTTTTGAAGTTTTTTGTTTTCTTGGTAGACAGATTGTCTATGAGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr20:20653530\|20680801	HNRNPA1	1	0	0
chr20:20653530\|20680801	FUS	0	1	0
chr20:20653530\|20680801	MSI2	0	0	1
chr20:20653530\|20680801	HNRNPC	0	1	0
chr20:20653530\|20680801	U2AF2	2	6	1
chr20:20653530\|20680801	CELF2	1	0	0
chr20:20653530\|20680801	DDX54	0	0	2
chr20:20653530\|20680801	LIN28B	1	0	0
chr20:20653530\|20680801	PRPF8	0	1	2
chr20:20653530\|20680801	TARDBP	2	1	0
chr20:20653530\|20680801	HNRNPM	1	0	0
chr20:20653530\|20680801	TAF15	0	1	0
chr20:20653530\|20680801	SF3B4	1	0	0
chr20:20653530\|20680801	CPSF7	1	0	0
chr20:20653530\|20680801	PTBP1	8	0	0
chr20:20653530\|20680801	FBL	0	2	2
chr20:20653530\|20680801	CPSF2	1	0	0
chr20:20653530\|20680801	EIF4A3	0	2	3
chr20:20653530\|20680801	AGO2	0	0	1

CircRNA Information