CircRNA Information

General Information
circRNA Basic Information
CircID chr20:23633684|23633972
Strand +
CircType exon
Host Gene ENSG00000101439.7;
Algorism CIRI2;
Sequence GCTGTGCCTTGGCAGGGCACAATGACCTTGTCGAAATCCACCTGTCAGGACGCCTAGGGGTCTGTACCGGGCTGGCCTGTGCCTATCACCTCTTATGCACACCTCCCACCCCCTGTATTCCCACCCCTGGACTGGTGGCCCCTGCCTTGGGGAAGGTCTCCCCATGTGCCTGCACCAGGAGACAGACAGAGAAGGCAGCAGGCGGCCTTTGTTGCTCAGCAAGGGGCTCTGCCCTCCCTCCTTCCTTCTTGCTTCTCATAGCCCCGGTGTGCGGTGCATACACCCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:23633684|23633972 hsa-miR-370-5p 0 0 1
chr20:23633684|23633972 hsa-miR-370-3p 0 0 1
chr20:23633684|23633972 hsa-miR-506-5p 0 0 1
chr20:23633684|23633972 hsa-miR-506-3p 0 0 1
chr20:23633684|23633972 hsa-miR-552-5p 0 0 1
chr20:23633684|23633972 hsa-miR-552-3p 0 0 1
chr20:23633684|23633972 hsa-miR-608 1 1 1
chr20:23633684|23633972 hsa-miR-616-5p 0 0 1
chr20:23633684|23633972 hsa-miR-616-3p 0 0 1
chr20:23633684|23633972 hsa-miR-624-5p 0 0 1
chr20:23633684|23633972 hsa-miR-624-3p 0 0 1
chr20:23633684|23633972 hsa-miR-874-5p 0 0 1
chr20:23633684|23633972 hsa-miR-874-3p 0 0 1
chr20:23633684|23633972 hsa-miR-939-5p 0 0 1
chr20:23633684|23633972 hsa-miR-939-3p 0 0 1
chr20:23633684|23633972 hsa-miR-940 0 1 1
chr20:23633684|23633972 hsa-miR-942-5p 0 0 1
chr20:23633684|23633972 hsa-miR-942-3p 0 0 1
chr20:23633684|23633972 hsa-miR-1290 0 0 1
chr20:23633684|23633972 hsa-miR-1253 0 0 1
chr20:23633684|23633972 hsa-miR-1252-5p 0 0 1
chr20:23633684|23633972 hsa-miR-1252-3p 0 0 1
chr20:23633684|23633972 hsa-miR-1321 0 0 1
chr20:23633684|23633972 hsa-miR-1225-3p 1 1 1
chr20:23633684|23633972 hsa-miR-769-5p 0 0 1
chr20:23633684|23633972 hsa-miR-146b-3p 0 0 1
chr20:23633684|23633972 hsa-miR-628-5p 0 0 1
chr20:23633684|23633972 hsa-miR-1207-5p 0 0 1
chr20:23633684|23633972 hsa-miR-455-3p 0 1 1
chr20:23633684|23633972 hsa-miR-502-3p 0 0 1
chr20:23633684|23633972 hsa-miR-501-3p 0 0 1
chr20:23633684|23633972 hsa-miR-876-5p 0 0 1
chr20:23633684|23633972 hsa-miR-124 0 0 1
chr20:23633684|23633972 hsa-miR-1300 0 0 1
chr20:23633684|23633972 hsa-miR-220a 0 0 1
chr20:23633684|23633972 hsa-miR-658 1 0 0
chr20:23633684|23633972 hsa-miR-762 1 0 0
chr20:23633684|23633972 hsa-miR-548q 0 1 0
chr20:23633684|23633972 hsa-miR-3154 1 0 0
chr20:23633684|23633972 hsa-miR-4269 0 1 0
chr20:23633684|23633972 hsa-miR-4281 1 0 0
chr20:23633684|23633972 hsa-miR-3660 0 1 0
chr20:23633684|23633972 hsa-miR-4466 1 0 0
chr20:23633684|23633972 hsa-miR-4476 0 1 0
chr20:23633684|23633972 hsa-miR-3689c 1 1 0
chr20:23633684|23633972 hsa-miR-4489 1 1 0
chr20:23633684|23633972 hsa-miR-4525 1 0 0
chr20:23633684|23633972 hsa-miR-4533 0 1 0
chr20:23633684|23633972 hsa-miR-3974 0 1 0
chr20:23633684|23633972 hsa-miR-4651 1 1 0
chr20:23633684|23633972 hsa-miR-4656 1 0 0
chr20:23633684|23633972 hsa-miR-4663 0 1 0
chr20:23633684|23633972 hsa-miR-4689 1 0 0
chr20:23633684|23633972 hsa-miR-4739 1 1 0
chr20:23633684|23633972 hsa-miR-4741 1 0 0
chr20:23633684|23633972 hsa-miR-5090 1 0 0
chr20:23633684|23633972 hsa-miR-6127 1 0 0
chr20:23633684|23633972 hsa-miR-6165 1 0 0
chr20:23633684|23633972 hsa-miR-8052 1 0 0
chr20:23633684|23633972 hsa-miR-12118 0 1 0
chr20:23633684|23633972 hsa-miR-150-3p 1 1 0
chr20:23633684|23633972 hsa-miR-4433b-3p 1 0 0
chr20:23633684|23633972 hsa-miR-196a-3p 0 1 0
chr20:23633684|23633972 hsa-miR-6747-5p 1 1 0
chr20:23633684|23633972 hsa-miR-3150a-3p 1 1 0
chr20:23633684|23633972 hsa-miR-6825-5p 1 1 0
chr20:23633684|23633972 hsa-miR-1972 0 1 0
chr20:23633684|23633972 hsa-miR-6799-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6089 1 0 0
chr20:23633684|23633972 hsa-miR-6873-5p 0 1 0
chr20:23633684|23633972 hsa-miR-6880-5p 1 0 0
chr20:23633684|23633972 hsa-miR-4722-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6727-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6806-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6721-5p 0 1 0
chr20:23633684|23633972 hsa-miR-4655-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6742-5p 1 0 0
chr20:23633684|23633972 hsa-miR-491-5p 0 1 0
chr20:23633684|23633972 hsa-miR-6732-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6798-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6760-5p 1 0 0
chr20:23633684|23633972 hsa-miR-3130-3p 1 1 0
chr20:23633684|23633972 hsa-miR-6782-5p 1 1 0
chr20:23633684|23633972 hsa-miR-30b-3p 0 1 0
chr20:23633684|23633972 hsa-miR-6882-3p 0 1 0
chr20:23633684|23633972 hsa-miR-3186-5p 0 1 0
chr20:23633684|23633972 hsa-miR-193b-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6784-5p 1 1 0
chr20:23633684|23633972 hsa-miR-4640-5p 1 0 0
chr20:23633684|23633972 hsa-miR-659-5p 0 1 0
chr20:23633684|23633972 hsa-miR-4743-3p 0 1 0
chr20:23633684|23633972 hsa-miR-4787-5p 1 0 0
chr20:23633684|23633972 hsa-miR-149-3p 1 1 0
chr20:23633684|23633972 hsa-miR-6830-5p 0 1 0
chr20:23633684|23633972 hsa-miR-3120-5p 0 1 0
chr20:23633684|23633972 hsa-miR-3065-5p 0 1 0
chr20:23633684|23633972 hsa-miR-744-5p 1 0 0
chr20:23633684|23633972 hsa-miR-3940-3p 0 1 0
chr20:23633684|23633972 hsa-miR-6768-3p 0 1 0
chr20:23633684|23633972 hsa-miR-5589-3p 0 1 0
chr20:23633684|23633972 hsa-miR-5195-5p 0 1 0
chr20:23633684|23633972 hsa-miR-181d-3p 0 1 0
chr20:23633684|23633972 hsa-miR-4787-3p 0 1 0
chr20:23633684|23633972 hsa-miR-675-3p 0 1 0
chr20:23633684|23633972 hsa-miR-1233-5p 1 1 0
chr20:23633684|23633972 hsa-miR-3689b-3p 1 1 0
chr20:23633684|23633972 hsa-miR-4763-3p 1 1 0
chr20:23633684|23633972 hsa-miR-6769b-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6778-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6816-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6893-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6775-5p 1 0 0
chr20:23633684|23633972 hsa-miR-1343-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6737-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6752-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6756-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6769a-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6803-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6842-5p 0 1 0
chr20:23633684|23633972 hsa-miR-6851-5p 1 1 0
chr20:23633684|23633972 hsa-miR-7110-5p 1 1 0
chr20:23633684|23633972 hsa-miR-1249-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6722-3p 1 1 0
chr20:23633684|23633972 hsa-miR-6751-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6779-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6797-5p 1 1 0
chr20:23633684|23633972 hsa-miR-6808-5p 1 0 0
chr20:23633684|23633972 hsa-miR-7111-5p 1 0 0
chr20:23633684|23633972 hsa-miR-320a-5p 0 1 0
chr20:23633684|23633972 hsa-miR-4728-5p 1 1 0
chr20:23633684|23633972 hsa-miR-5196-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6836-5p 1 0 0
chr20:23633684|23633972 hsa-miR-10396a-5p 1 0 0
chr20:23633684|23633972 hsa-miR-10396b-5p 1 0 0
chr20:23633684|23633972 hsa-miR-1909-3p 0 1 0
chr20:23633684|23633972 hsa-miR-3689a-3p 1 1 0
chr20:23633684|23633972 hsa-miR-4685-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6729-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6735-5p 0 1 0
chr20:23633684|23633972 hsa-miR-675-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6794-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6848-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6858-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6883-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6511b-5p 0 1 0
chr20:23633684|23633972 hsa-miR-1285-3p 0 1 0
chr20:23633684|23633972 hsa-miR-7843-5p 1 1 0
chr20:23633684|23633972 hsa-miR-3173-3p 0 1 0
chr20:23633684|23633972 hsa-miR-4646-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6876-5p 0 1 0
chr20:23633684|23633972 hsa-miR-6891-5p 0 1 0
chr20:23633684|23633972 hsa-miR-4472 0 1 0
chr20:23633684|23633972 hsa-miR-6766-5p 0 1 0
chr20:23633684|23633972 hsa-miR-6785-5p 1 0 0
chr20:23633684|23633972 hsa-miR-3689d 0 1 0
chr20:23633684|23633972 hsa-miR-6791-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6762-5p 1 0 0
chr20:23633684|23633972 hsa-miR-6893-3p 0 1 0
chr20:23633684|23633972 hsa-miR-4756-5p 0 1 0
chr20:23633684|23633972 hsa-miR-6811-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr20:23633684|23633972
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MDWWPLPWGRSPHVPAPGDRQRRQQAAFVAQQGALPSLLPSCFS
Nucleotide Sequence CTGGACTGGTGGCCCCTGCCTTGGGGAAGGTCTCCCCATGTGCCTGCACCAGGAGACAGACAGAGAAGGCAGCAGGCGGCCTTTGTTGCTCAGCAAGGGGCTCTGCCCTCCCTCCTTCCTTCTTGCTTCTCATAG
CircID chr20:23633684|23633972
ORF Type ORF2
Protein Length 76
Nucleotide Length 228
Protein Sequence MYRAGLCLSPLMHTSHPLYSHPWTGGPCLGEGLPMCLHQETDREGSRRPLLLSKGLCPPSFLLASHSPGVRCIHPH
Nucleotide Sequence CTGTACCGGGCTGGCCTGTGCCTATCACCTCTTATGCACACCTCCCACCCCCTGTATTCCCACCCCTGGACTGGTGGCCCCTGCCTTGGGGAAGGTCTCCCCATGTGCCTGCACCAGGAGACAGACAGAGAAGGCAGCAGGCGGCCTTTGTTGCTCAGCAAGGGGCTCTGCCCTCCCTCCTTCCTTCTTGCTTCTCATAGCCCCGGTGTGCGGTGCATACACCCCCAC
CircID chr20:23633684|23633972
ORF Type ORF3
Protein Length 93
Nucleotide Length 279
Protein Sequence MAGHNDLVEIHLSGRLGVCTGLACAYHLLCTPPTPCIPTPGLVAPALGKVSPCACTRRQTEKAAGGLCCSARGSALPPSFLLLIAPVCGAYTP
Nucleotide Sequence TTGGCAGGGCACAATGACCTTGTCGAAATCCACCTGTCAGGACGCCTAGGGGTCTGTACCGGGCTGGCCTGTGCCTATCACCTCTTATGCACACCTCCCACCCCCTGTATTCCCACCCCTGGACTGGTGGCCCCTGCCTTGGGGAAGGTCTCCCCATGTGCCTGCACCAGGAGACAGACAGAGAAGGCAGCAGGCGGCCTTTGTTGCTCAGCAAGGGGCTCTGCCCTCCCTCCTTCCTTCTTGCTTCTCATAGCCCCGGTGTGCGGTGCATACACCCCC
CircID chr20:23633684|23633972
ORF Type ORF4
Protein Length 57
Nucleotide Length 174
Protein Sequence MRSKKEGGRAEPLAEQQRPPAAFSVCLLVQAHGETFPKAGATSPGVGIQGVGGVHKR
Nucleotide Sequence ATGAGAAGCAAGAAGGAAGGAGGGAGGGCAGAGCCCCTTGCTGAGCAACAAAGGCCGCCTGCTGCCTTCTCTGTCTGTCTCCTGGTGCAGGCACATGGGGAGACCTTCCCCAAGGCAGGGGCCACCAGTCCAGGGGTGGGAATACAGGGGGTGGGAGGTGTGCATAAGAGGTGA
CircID chr20:23633684|23633972
ORF Type ORF5
Protein Length 74
Nucleotide Length 222
Protein Sequence MLSNKGRLLPSLSVSWCRHMGRPSPRQGPPVQGWEYRGWEVCIRGDRHRPARYRPLGVLTGGFRQGHCALPRHS
Nucleotide Sequence TTGCTGAGCAACAAAGGCCGCCTGCTGCCTTCTCTGTCTGTCTCCTGGTGCAGGCACATGGGGAGACCTTCCCCAAGGCAGGGGCCACCAGTCCAGGGGTGGGAATACAGGGGGTGGGAGGTGTGCATAAGAGGTGATAGGCACAGGCCAGCCCGGTACAGACCCCTAGGCGTCCTGACAGGTGGATTTCGACAAGGTCATTGTGCCCTGCCAAGGCACAGC
CircID chr20:23633684|23633972
ORF Type ORF6
Protein Length 30
Nucleotide Length 93
Protein Sequence MSPGAGTWGDLPQGRGHQSRGGNTGGGRCA
Nucleotide Sequence CTGTCTCCTGGTGCAGGCACATGGGGAGACCTTCCCCAAGGCAGGGGCCACCAGTCCAGGGGTGGGAATACAGGGGGTGGGAGGTGTGCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab