CircNet

General Information

circRNA Basic Information

CircID	chr20:23635338\|23637724
Strand	-
CircType	exon
Host Gene	ENSG00000101439.7;
Algorism	CIRI2;
Sequence	GTCCAAGAAGTAGTTCACCCCAGCTACGATCTGCTTGCGGGCGCGCACCACCTGCAGCGCGCGGCTGTGGTACATGTCGTTGCTGGCTTTGTTGTACTCGCCGACGGCAAAGTCCAGTGCACGCCGCACACCCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:23635338\|23637724	hsa-miR-422a	0	1	1
chr20:23635338\|23637724	hsa-miR-432-5p	0	0	1
chr20:23635338\|23637724	hsa-miR-432-3p	0	0	1
chr20:23635338\|23637724	hsa-miR-606	0	0	1
chr20:23635338\|23637724	hsa-miR-608	0	0	1
chr20:23635338\|23637724	hsa-miR-657	0	0	1
chr20:23635338\|23637724	hsa-miR-675-5p	0	0	1
chr20:23635338\|23637724	hsa-miR-675-3p	0	0	1
chr20:23635338\|23637724	hsa-miR-891a-5p	0	0	1
chr20:23635338\|23637724	hsa-miR-891a-3p	0	0	1
chr20:23635338\|23637724	hsa-miR-147b-5p	0	0	1
chr20:23635338\|23637724	hsa-miR-147b-3p	0	0	1
chr20:23635338\|23637724	hsa-miR-1205	0	0	1
chr20:23635338\|23637724	hsa-miR-140-3p	0	0	1
chr20:23635338\|23637724	hsa-miR-342-5p	0	0	1
chr20:23635338\|23637724	hsa-miR-378	0	0	1
chr20:23635338\|23637724	hsa-miR-1183	1	0	0
chr20:23635338\|23637724	hsa-miR-378c	0	1	0
chr20:23635338\|23637724	hsa-miR-4285	0	1	0
chr20:23635338\|23637724	hsa-miR-3665	0	1	0
chr20:23635338\|23637724	hsa-miR-378e	0	1	0
chr20:23635338\|23637724	hsa-miR-378h	0	1	0
chr20:23635338\|23637724	hsa-miR-8058	0	1	0
chr20:23635338\|23637724	hsa-miR-4665-3p	1	0	0
chr20:23635338\|23637724	hsa-miR-6804-5p	0	1	0
chr20:23635338\|23637724	hsa-miR-6869-3p	0	1	0
chr20:23635338\|23637724	hsa-miR-6737-5p	0	1	0
chr20:23635338\|23637724	hsa-miR-378a-3p	0	1	0
chr20:23635338\|23637724	hsa-miR-6724-5p	1	0	0
chr20:23635338\|23637724	hsa-miR-10394-5p	0	1	0
chr20:23635338\|23637724	hsa-miR-378d	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:23635338\|23637724
ORF Type	ORF1
Protein Length	35
Nucleotide Length	105
Protein Sequence	MLAGAHHLQRAAVVHVVAGFVVLADGKVQCTPHTL
Nucleotide Sequence	CTGCTTGCGGGCGCGCACCACCTGCAGCGCGCGGCTGTGGTACATGTCGTTGCTGGCTTTGTTGTACTCGCCGACGGCAAAGTCCAGTGCACGCCGCACACCCTC

CircID	chr20:23635338\|23637724
ORF Type	ORF2
Protein Length	33
Nucleotide Length	99
Protein Sequence	MRARTTCSARLWYMSLLALLYSPTAKSSARRTP
Nucleotide Sequence	TTGCGGGCGCGCACCACCTGCAGCGCGCGGCTGTGGTACATGTCGTTGCTGGCTTTGTTGTACTCGCCGACGGCAAAGTCCAGTGCACGCCGCACACCC

CircID	chr20:23635338\|23637724
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	MDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLD
Nucleotide Sequence	CTGGACTTTGCCGTCGGCGAGTACAACAAAGCCAGCAACGACATGTACCACAGCCGCGCGCTGCAGGTGGTGCGCGCCCGCAAGCAGATCGTAGCTGGGGTGAACTACTTCTTGGAC

CircID	chr20:23635338\|23637724
ORF Type	ORF4
Protein Length	28
Nucleotide Length	87
Protein Sequence	MPSASTTKPATTCTTAARCRWCAPASRS
Nucleotide Sequence	TTGCCGTCGGCGAGTACAACAAAGCCAGCAACGACATGTACCACAGCCGCGCGCTGCAGGTGGTGCGCGCCCGCAAGCAGATCGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information