CircNet

General Information

circRNA Basic Information

CircID	chr20:2483571\|2483763
Strand	+
CircType	exon
Host Gene	ENSG00000088876.10;
Algorism	CIRI2;
Sequence	CAGAGGATACACTCAGGGGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGAGGCTTTAGCCAGAACTCAGATCTCATCAAACACCAGAGGACACACTTGGATGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGAGGCTTTTGTGACAAGTCAACCCTCATCATACACGAGCGGACGCACTCTGGAGAGAAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr20:2483571\|2483763	hsa-miR-149-5p	0	1
chr20:2483571\|2483763	hsa-miR-149-3p	0	1
chr20:2483571\|2483763	hsa-miR-563	0	1
chr20:2483571\|2483763	hsa-miR-572	0	1
chr20:2483571\|2483763	hsa-miR-595	1	1
chr20:2483571\|2483763	hsa-miR-766-5p	0	1
chr20:2483571\|2483763	hsa-miR-766-3p	0	1
chr20:2483571\|2483763	hsa-miR-942-5p	0	1
chr20:2483571\|2483763	hsa-miR-942-3p	0	1
chr20:2483571\|2483763	hsa-miR-1272	0	1
chr20:2483571\|2483763	hsa-miR-1322	0	1
chr20:2483571\|2483763	hsa-miR-296-3p	0	1
chr20:2483571\|2483763	hsa-miR-574-5p	1	1
chr20:2483571\|2483763	hsa-miR-525-5p	0	1
chr20:2483571\|2483763	hsa-miR-331-3p	0	1
chr20:2483571\|2483763	hsa-miR-520a-5p	0	1
chr20:2483571\|2483763	hsa-miR-125a-5p	0	1
chr20:2483571\|2483763	hsa-miR-125b	0	1
chr20:2483571\|2483763	hsa-miR-3183	1	0
chr20:2483571\|2483763	hsa-miR-4682	1	0
chr20:2483571\|2483763	hsa-miR-7978	1	0
chr20:2483571\|2483763	hsa-miR-12116	1	0
chr20:2483571\|2483763	hsa-miR-6749-3p	1	0
chr20:2483571\|2483763	hsa-miR-4711-3p	1	0
chr20:2483571\|2483763	hsa-miR-508-5p	1	0
chr20:2483571\|2483763	hsa-miR-6799-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:2483571\|2483763
ORF Type	ORF1
Protein Length	32
Nucleotide Length	96
Protein Sequence	MDEKPYVCRECGRGFCDKSTLIIHERTHSGEK
Nucleotide Sequence	TTGGATGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGAGGCTTTTGTGACAAGTCAACCCTCATCATACACGAGCGGACGCACTCTGGAGAGAAG

CircID	chr20:2483571\|2483763
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MFAGSVGEALARTQISSNTRGHTWMRSLMFAGSVGEAFVTSQPSSYTSGRTLERS
Nucleotide Sequence	ATGTTTGCAGGGAGTGTGGGCGAGGCTTTAGCCAGAACTCAGATCTCATCAAACACCAGAGGACACACTTGGATGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGAGGCTTTTGTGACAAGTCAACCCTCATCATACACGAGCGGACGCACTCTGGAGAGAAGC

CircID	chr20:2483571\|2483763
ORF Type	ORF3
Protein Length	25
Nucleotide Length	78
Protein Sequence	MTCHKSLAHTPCKHKASHPSVSSGV
Nucleotide Sequence	TTGACTTGTCACAAAAGCCTCGCCCACACTCCCTGCAAACATAAGGCTTCTCATCCAAGTGTGTCCTCTGGTGTTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information