CircNet

General Information

circRNA Basic Information

CircID	chr20:25300430\|25300535
Strand	+
CircType	exon
Host Gene	ENSG00000100997.17;
Algorism	CIRI2;
Sequence	TGAGCTGGACAGGGGGAGTCCGGGCAGGGGACTCTTGGGGCTCGGGACCATGCTGAGCTTTTTGGCACCACCCACAGAGAACGTGGGGTCCAGGTTCTTTCTGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:25300430\|25300535	hsa-miR-198	0	0	1
chr20:25300430\|25300535	hsa-miR-619-5p	0	0	1
chr20:25300430\|25300535	hsa-miR-619-3p	0	0	1
chr20:25300430\|25300535	hsa-miR-662	0	0	1
chr20:25300430\|25300535	hsa-miR-298	0	0	1
chr20:25300430\|25300535	hsa-miR-1293	0	1	1
chr20:25300430\|25300535	hsa-miR-1225-3p	0	0	1
chr20:25300430\|25300535	hsa-miR-615-3p	0	1	1
chr20:25300430\|25300535	hsa-miR-339-5p	0	0	1
chr20:25300430\|25300535	hsa-miR-490-3p	0	1	1
chr20:25300430\|25300535	hsa-miR-331-3p	0	0	1
chr20:25300430\|25300535	hsa-miR-548b-3p	0	0	1
chr20:25300430\|25300535	hsa-miR-608	1	1	0
chr20:25300430\|25300535	hsa-miR-1538	0	1	0
chr20:25300430\|25300535	hsa-miR-6759-5p	0	1	0
chr20:25300430\|25300535	hsa-miR-3690	0	1	0
chr20:25300430\|25300535	hsa-miR-5000-5p	0	1	0
chr20:25300430\|25300535	hsa-miR-6793-3p	1	0	0
chr20:25300430\|25300535	hsa-miR-6752-3p	0	1	0
chr20:25300430\|25300535	hsa-miR-3085-5p	1	0	0
chr20:25300430\|25300535	hsa-miR-10396b-3p	1	0	0
chr20:25300430\|25300535	hsa-miR-6801-3p	0	1	0
chr20:25300430\|25300535	hsa-miR-6810-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:25300430\|25300535
ORF Type	ORF1
Protein Length	34
Nucleotide Length	102
Protein Sequence	MDRGSPGRGLLGLGTMLSFLAPPTENVGSRFFLH
Nucleotide Sequence	CTGGACAGGGGGAGTCCGGGCAGGGGACTCTTGGGGCTCGGGACCATGCTGAGCTTTTTGGCACCACCCACAGAGAACGTGGGGTCCAGGTTCTTTCTGCAC

CircID	chr20:25300430\|25300535
ORF Type	ORF2
Protein Length	31
Nucleotide Length	93
Protein Sequence	MDPTFSVGGAKKLSMVPSPKSPLPGLPLSSS
Nucleotide Sequence	CTGGACCCCACGTTCTCTGTGGGTGGTGCCAAAAAGCTCAGCATGGTCCCGAGCCCCAAGAGTCCCCTGCCCGGACTCCCCCTGTCCAGCTCA

CircID	chr20:25300430\|25300535
ORF Type	ORF3
Protein Length	25
Nucleotide Length	75
Protein Sequence	MWVVPKSSAWSRAPRVPCPDSPCPA
Nucleotide Sequence	CTGTGGGTGGTGCCAAAAAGCTCAGCATGGTCCCGAGCCCCAAGAGTCCCCTGCCCGGACTCCCCCTGTCCAGCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information