CircNet

General Information

circRNA Basic Information

CircID	chr20:2653285\|2653393
Strand	+
CircType	exon
Host Gene	ENSG00000101361.13;
Algorism	CIRI2;
Sequence	CTTCAGACACGGCGTTGGCATTTTCCAAGGCAACCTGGGATGAGGCAAAGGGACAAAAGGCCACCAGACGAACGATGCTGTGGAATTTGCCCAGGTTGAGCACAGACTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:2653285\|2653393	hsa-miR-187-5p	0	0	1
chr20:2653285\|2653393	hsa-miR-187-3p	0	0	1
chr20:2653285\|2653393	hsa-miR-204-5p	0	0	1
chr20:2653285\|2653393	hsa-miR-204-3p	0	0	1
chr20:2653285\|2653393	hsa-miR-211-5p	0	0	1
chr20:2653285\|2653393	hsa-miR-211-3p	0	0	1
chr20:2653285\|2653393	hsa-miR-612	0	0	1
chr20:2653285\|2653393	hsa-miR-490-3p	0	0	1
chr20:2653285\|2653393	hsa-miR-1285	0	0	1
chr20:2653285\|2653393	hsa-miR-4456	0	1	0
chr20:2653285\|2653393	hsa-miR-4726-3p	0	1	0
chr20:2653285\|2653393	hsa-miR-656-5p	0	1	0
chr20:2653285\|2653393	hsa-miR-4646-3p	1	0	0
chr20:2653285\|2653393	hsa-miR-6870-3p	0	1	0
chr20:2653285\|2653393	hsa-miR-6851-3p	1	0	0
chr20:2653285\|2653393	hsa-miR-5008-3p	0	1	0
chr20:2653285\|2653393	hsa-miR-377-5p	0	1	0
chr20:2653285\|2653393	hsa-miR-6737-3p	0	1	0
chr20:2653285\|2653393	hsa-miR-3121-5p	0	1	0
chr20:2653285\|2653393	hsa-miR-7157-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:2653285\|2653393
ORF Type	ORF1
Protein Length	31
Nucleotide Length	93
Protein Sequence	MAFSKATWDEAKGQKATRRTMLWNLPRLSTD
Nucleotide Sequence	TTGGCATTTTCCAAGGCAACCTGGGATGAGGCAAAGGGACAAAAGGCCACCAGACGAACGATGCTGTGGAATTTGCCCAGGTTGAGCACAGAC

CircID	chr20:2653285\|2653393
ORF Type	ORF2
Protein Length	31
Nucleotide Length	93
Protein Sequence	MGKFHSIVRLVAFCPFASSQVALENANAVSE
Nucleotide Sequence	CTGGGCAAATTCCACAGCATCGTTCGTCTGGTGGCCTTTTGTCCCTTTGCCTCATCCCAGGTTGCCTTGGAAAATGCCAACGCCGTGTCTGAA

CircID	chr20:2653285\|2653393
ORF Type	ORF3
Protein Length	35
Nucleotide Length	105
Protein Sequence	MCSTWANSTASFVWWPFVPLPHPRLPWKMPTPCLK
Nucleotide Sequence	CTGTGCTCAACCTGGGCAAATTCCACAGCATCGTTCGTCTGGTGGCCTTTTGTCCCTTTGCCTCATCCCAGGTTGCCTTGGAAAATGCCAACGCCGTGTCTGAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information