CircRNA Information

General Information
circRNA Basic Information
CircID chr20:2663522|2663744
Strand -
CircType exon
Host Gene ENSG00000101365.19;
Algorism CIRI2;
Sequence CTCACTCAGGTGGTGCTCCTGGAACTCCACTGGGACAGCGGCAGCCTTCAGAGACAGGTTCCCAAAACATCACAGTCAAGGCCAAGTCCTTTCCAACACACTACTGTCCTCTACTGTCTGATCCCCGAGGCCACTCACCTTGAACACCTCCTTGACGGCGTGCATCAGCTCAGGCCCCACACCGTCTCCCGGAAGCATGGTCACGGGAAAGGAGCCCTCCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:2663522|2663744 hsa-miR-29a-5p 0 0 1
chr20:2663522|2663744 hsa-miR-29a-3p 0 0 1
chr20:2663522|2663744 hsa-miR-29c-5p 0 0 1
chr20:2663522|2663744 hsa-miR-29c-3p 0 0 1
chr20:2663522|2663744 hsa-miR-383-5p 0 0 1
chr20:2663522|2663744 hsa-miR-383-3p 0 0 1
chr20:2663522|2663744 hsa-miR-558 0 0 1
chr20:2663522|2663744 hsa-miR-591 0 0 1
chr20:2663522|2663744 hsa-miR-593-5p 0 0 1
chr20:2663522|2663744 hsa-miR-593-3p 0 0 1
chr20:2663522|2663744 hsa-miR-648 0 0 1
chr20:2663522|2663744 hsa-miR-649 0 0 1
chr20:2663522|2663744 hsa-miR-877-5p 0 0 1
chr20:2663522|2663744 hsa-miR-877-3p 0 0 1
chr20:2663522|2663744 hsa-miR-665 0 0 1
chr20:2663522|2663744 hsa-miR-936 0 1 1
chr20:2663522|2663744 hsa-miR-943 0 0 1
chr20:2663522|2663744 hsa-miR-1292-5p 0 0 1
chr20:2663522|2663744 hsa-miR-1292-3p 0 0 1
chr20:2663522|2663744 hsa-miR-1324 0 0 1
chr20:2663522|2663744 hsa-miR-491-5p 0 0 1
chr20:2663522|2663744 hsa-miR-542-5p 0 1 1
chr20:2663522|2663744 hsa-miR-199b-3p 0 0 1
chr20:2663522|2663744 hsa-miR-199a-3p 0 0 1
chr20:2663522|2663744 hsa-miR-516a-3p 0 0 1
chr20:2663522|2663744 hsa-miR-142-3p 0 0 1
chr20:2663522|2663744 hsa-miR-220b 0 0 1
chr20:2663522|2663744 hsa-miR-29b 0 0 1
chr20:2663522|2663744 hsa-miR-638 1 0 0
chr20:2663522|2663744 hsa-miR-2861 1 1 0
chr20:2663522|2663744 hsa-miR-4270 1 0 0
chr20:2663522|2663744 hsa-miR-4281 1 0 0
chr20:2663522|2663744 hsa-miR-4421 0 1 0
chr20:2663522|2663744 hsa-miR-4450 1 0 0
chr20:2663522|2663744 hsa-miR-4683 1 0 0
chr20:2663522|2663744 hsa-miR-4721 1 1 0
chr20:2663522|2663744 hsa-miR-8075 0 1 0
chr20:2663522|2663744 hsa-miR-8083 0 1 0
chr20:2663522|2663744 hsa-miR-9901 1 0 0
chr20:2663522|2663744 hsa-miR-12115 0 1 0
chr20:2663522|2663744 hsa-miR-12118 1 0 0
chr20:2663522|2663744 hsa-miR-4433a-3p 1 0 0
chr20:2663522|2663744 hsa-miR-6765-5p 1 0 0
chr20:2663522|2663744 hsa-miR-125a-3p 1 0 0
chr20:2663522|2663744 hsa-miR-6799-5p 1 1 0
chr20:2663522|2663744 hsa-miR-3663-3p 0 1 0
chr20:2663522|2663744 hsa-miR-7114-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6089 1 0 0
chr20:2663522|2663744 hsa-miR-7847-3p 1 0 0
chr20:2663522|2663744 hsa-miR-6746-5p 1 1 0
chr20:2663522|2663744 hsa-miR-6762-3p 1 0 0
chr20:2663522|2663744 hsa-miR-6727-5p 1 0 0
chr20:2663522|2663744 hsa-miR-3187-3p 1 0 0
chr20:2663522|2663744 hsa-miR-6793-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6796-5p 1 1 0
chr20:2663522|2663744 hsa-miR-6732-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6827-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6798-5p 1 0 0
chr20:2663522|2663744 hsa-miR-1226-5p 1 0 0
chr20:2663522|2663744 hsa-miR-4713-3p 1 0 0
chr20:2663522|2663744 hsa-miR-6847-5p 1 1 0
chr20:2663522|2663744 hsa-miR-3648 1 0 0
chr20:2663522|2663744 hsa-miR-339-5p 1 0 0
chr20:2663522|2663744 hsa-miR-4645-3p 0 1 0
chr20:2663522|2663744 hsa-miR-29b-3p 0 1 0
chr20:2663522|2663744 hsa-miR-6769b-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6752-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6756-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6803-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6851-5p 1 1 0
chr20:2663522|2663744 hsa-miR-7110-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6751-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6780b-5p 1 0 0
chr20:2663522|2663744 hsa-miR-4632-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6777-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6794-5p 1 0 0
chr20:2663522|2663744 hsa-miR-939-5p 1 0 0
chr20:2663522|2663744 hsa-miR-6855-5p 1 0 0
chr20:2663522|2663744 hsa-miR-4700-5p 1 0 0
chr20:2663522|2663744 hsa-miR-3679-5p 1 0 0
chr20:2663522|2663744 hsa-miR-4747-5p 1 1 0
chr20:2663522|2663744 hsa-miR-6891-5p 0 1 0
chr20:2663522|2663744 hsa-miR-6849-5p 1 0 0
chr20:2663522|2663744 hsa-miR-10397-5p 0 1 0
chr20:2663522|2663744 hsa-miR-3129-5p 1 1 0
chr20:2663522|2663744 hsa-miR-5699-3p 0 1 0
chr20:2663522|2663744 hsa-miR-3922-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr20:2663522|2663744
ORF Type ORF1
Protein Length 68
Nucleotide Length 204
Protein Sequence MELHWDSGSLQRQVPKTSQSRPSPFQHTTVLYCLIPEATHLEHLLDGVHQLRPHTVSRKHGHGKGALH
Nucleotide Sequence CTGGAACTCCACTGGGACAGCGGCAGCCTTCAGAGACAGGTTCCCAAAACATCACAGTCAAGGCCAAGTCCTTTCCAACACACTACTGTCCTCTACTGTCTGATCCCCGAGGCCACTCACCTTGAACACCTCCTTGACGGCGTGCATCAGCTCAGGCCCCACACCGTCTCCCGGAAGCATGGTCACGGGAAAGGAGCCCTCCAC

CircID chr20:2663522|2663744
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MNTSLTACISSGPTPSPGSMVTGKEPST
Nucleotide Sequence TTGAACACCTCCTTGACGGCGTGCATCAGCTCAGGCCCCACACCGTCTCCCGGAAGCATGGTCACGGGAAAGGAGCCCTCCACC

CircID chr20:2663522|2663744
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MGQRQPSETGSQNITVKAKSFPTHYCPLLSDPRGHSP
Nucleotide Sequence CTGGGACAGCGGCAGCCTTCAGAGACAGGTTCCCAAAACATCACAGTCAAGGCCAAGTCCTTTCCAACACACTACTGTCCTCTACTGTCTGATCCCCGAGGCCACTCACCTTGA

CircID chr20:2663522|2663744
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MALTVMFWEPVSEGCRCPSGVPGAPPE
Nucleotide Sequence TTGGCCTTGACTGTGATGTTTTGGGAACCTGTCTCTGAAGGCTGCCGCTGTCCCAGTGGAGTTCCAGGAGCACCACCTGAGTGA

CircID chr20:2663522|2663744
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence MLPGDGVGPELMHAVKEVFKVSGLGDQTVEDSSVLERTWP
Nucleotide Sequence ATGCTTCCGGGAGACGGTGTGGGGCCTGAGCTGATGCACGCCGTCAAGGAGGTGTTCAAGGTGAGTGGCCTCGGGGATCAGACAGTAGAGGACAGTAGTGTGTTGGAAAGGACTTGGCCTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites