CircNet

General Information

circRNA Basic Information

CircID	chr20:2749009\|2749212
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CCCCAGATGAACTGACTCCCCAGGCGCTACAAAAATAAAGACCCCTGAAAAAACTGGCTCCTTAGGCAAAGAATGGCTACTGTTTTTGCATACACAGAATGCTGGGTTGTATCCACGGACCTCCAAGCCAGGAATGGGGTCTTAGGCAAGTGGAGGTGGGCAGCATCAGCCGGAGAACTCAGCAGCAGGAGCCCCTGCCCTATT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:2749009\|2749212	hsa-miR-223-5p	0	0	1
chr20:2749009\|2749212	hsa-miR-223-3p	0	0	1
chr20:2749009\|2749212	hsa-miR-370-5p	0	0	1
chr20:2749009\|2749212	hsa-miR-370-3p	0	0	1
chr20:2749009\|2749212	hsa-miR-432-5p	0	0	1
chr20:2749009\|2749212	hsa-miR-432-3p	0	0	1
chr20:2749009\|2749212	hsa-miR-575	0	0	1
chr20:2749009\|2749212	hsa-miR-637	0	0	1
chr20:2749009\|2749212	hsa-miR-661	0	0	1
chr20:2749009\|2749212	hsa-miR-939-5p	0	0	1
chr20:2749009\|2749212	hsa-miR-939-3p	0	0	1
chr20:2749009\|2749212	hsa-miR-1179	0	0	1
chr20:2749009\|2749212	hsa-miR-193a-5p	0	0	1
chr20:2749009\|2749212	hsa-miR-1224-3p	0	1	1
chr20:2749009\|2749212	hsa-miR-338-3p	0	0	1
chr20:2749009\|2749212	hsa-miR-1207-5p	0	0	1
chr20:2749009\|2749212	hsa-miR-768-5p	0	0	1
chr20:2749009\|2749212	hsa-miR-762	1	0	0
chr20:2749009\|2749212	hsa-miR-940	1	0	0
chr20:2749009\|2749212	hsa-miR-3137	1	0	0
chr20:2749009\|2749212	hsa-miR-4324	0	1	0
chr20:2749009\|2749212	hsa-miR-4329	0	1	0
chr20:2749009\|2749212	hsa-miR-4328	0	1	0
chr20:2749009\|2749212	hsa-miR-4682	0	1	0
chr20:2749009\|2749212	hsa-miR-4767	1	0	0
chr20:2749009\|2749212	hsa-miR-5698	1	0	0
chr20:2749009\|2749212	hsa-miR-5705	1	0	0
chr20:2749009\|2749212	hsa-miR-6069	1	0	0
chr20:2749009\|2749212	hsa-miR-6090	1	0	0
chr20:2749009\|2749212	hsa-miR-8089	1	1	0
chr20:2749009\|2749212	hsa-miR-12128	1	0	0
chr20:2749009\|2749212	hsa-miR-7155-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6867-5p	0	1	0
chr20:2749009\|2749212	hsa-miR-6721-5p	1	1	0
chr20:2749009\|2749212	hsa-miR-23b-5p	0	1	0
chr20:2749009\|2749212	hsa-miR-6827-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6798-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6782-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6882-3p	1	1	0
chr20:2749009\|2749212	hsa-miR-4640-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-3127-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-1228-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-4787-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6824-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-3162-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-550b-2-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-1306-5p	0	1	0
chr20:2749009\|2749212	hsa-miR-1225-5p	1	1	0
chr20:2749009\|2749212	hsa-miR-4750-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-1296-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-4645-3p	1	1	0
chr20:2749009\|2749212	hsa-miR-4763-3p	1	1	0
chr20:2749009\|2749212	hsa-miR-6787-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6743-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6752-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6813-5p	0	1	0
chr20:2749009\|2749212	hsa-miR-7110-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6722-3p	1	0	0
chr20:2749009\|2749212	hsa-miR-6763-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6879-5p	0	1	0
chr20:2749009\|2749212	hsa-miR-1909-3p	1	1	0
chr20:2749009\|2749212	hsa-miR-4726-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6729-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6735-5p	1	1	0
chr20:2749009\|2749212	hsa-miR-6777-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6889-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-7843-5p	0	1	0
chr20:2749009\|2749212	hsa-miR-1914-3p	1	0	0
chr20:2749009\|2749212	hsa-miR-6855-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-4667-5p	1	1	0
chr20:2749009\|2749212	hsa-miR-550a-3-5p	1	1	0
chr20:2749009\|2749212	hsa-miR-550a-5p	1	1	0
chr20:2749009\|2749212	hsa-miR-6762-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6822-5p	1	0	0
chr20:2749009\|2749212	hsa-miR-6893-3p	0	1	0
chr20:2749009\|2749212	hsa-miR-7157-5p	0	1	0
chr20:2749009\|2749212	hsa-miR-376b-5p	0	1	0
chr20:2749009\|2749212	hsa-miR-4774-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:2749009\|2749212
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MATVFAYTECWVVSTDLQARNGVLGKWRWAASAGELSSRSPCPI
Nucleotide Sequence	ATGGCTACTGTTTTTGCATACACAGAATGCTGGGTTGTATCCACGGACCTCCAAGCCAGGAATGGGGTCTTAGGCAAGTGGAGGTGGGCAGCATCAGCCGGAGAACTCAGCAGCAGGAGCCCCTGCCCTATT

CircID	chr20:2749009\|2749212
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MLGCIHGPPSQEWGLRQVEVGSISRRTQQQEPLPY
Nucleotide Sequence	ATGCTGGGTTGTATCCACGGACCTCCAAGCCAGGAATGGGGTCTTAGGCAAGTGGAGGTGGGCAGCATCAGCCGGAGAACTCAGCAGCAGGAGCCCCTGCCCTAT

CircID	chr20:2749009\|2749212
ORF Type	ORF3
Protein Length	42
Nucleotide Length	126
Protein Sequence	MEVRGYNPAFCVCKNSSHSLPKEPVFSGVFIFVAPGESVHLG
Nucleotide Sequence	TTGGAGGTCCGTGGATACAACCCAGCATTCTGTGTATGCAAAAACAGTAGCCATTCTTTGCCTAAGGAGCCAGTTTTTTCAGGGGTCTTTATTTTTGTAGCGCCTGGGGAGTCAGTTCATCTGGGG

CircID	chr20:2749009\|2749212
ORF Type	ORF4
Protein Length	53
Nucleotide Length	162
Protein Sequence	MLLSSPADAAHLHLPKTPFLAWRSVDTTQHSVYAKTVAILCLRSQFFQGSLFL
Nucleotide Sequence	CTGCTGCTGAGTTCTCCGGCTGATGCTGCCCACCTCCACTTGCCTAAGACCCCATTCCTGGCTTGGAGGTCCGTGGATACAACCCAGCATTCTGTGTATGCAAAAACAGTAGCCATTCTTTGCCTAAGGAGCCAGTTTTTTCAGGGGTCTTTATTTTTGTAG

CircID	chr20:2749009\|2749212
ORF Type	ORF5
Protein Length	30
Nucleotide Length	93
Protein Sequence	MMLPTSTCLRPHSWLGGPWIQPSILCMQKQ
Nucleotide Sequence	CTGATGCTGCCCACCTCCACTTGCCTAAGACCCCATTCCTGGCTTGGAGGTCCGTGGATACAACCCAGCATTCTGTGTATGCAAAAACAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information