CircRNA Information

General Information
circRNA Basic Information
CircID chr20:2865153|2865492
Strand -
CircType exon
Host Gene ENSG00000215305.8;
Algorism CIRI2;
Sequence AGAGGATCAAATGCGGCTCCTACGGCTGCAGCGGCGCCTAGAAGACGAGCTGGGGGGCCAGTTCCTAGACCTGTCTCTACATGACACAGTTACCACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGTAGGTGAGGGCCCAGGCTGCATGTGGGTCCCAGGACCACCTGCCTCTCCTGCAACACCTCCAAGCCCAGCTTTCCTGCAGGCTCTGGTGGCTGAAGCTGACTGCCCTGGCAGATTTGGAAGATTGGGAAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTGGCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:2865153|2865492 hsa-miR-224-5p 0 0 1
chr20:2865153|2865492 hsa-miR-224-3p 0 0 1
chr20:2865153|2865492 hsa-miR-320a-5p 0 0 1
chr20:2865153|2865492 hsa-miR-320a-3p 0 0 1
chr20:2865153|2865492 hsa-miR-432-5p 0 0 1
chr20:2865153|2865492 hsa-miR-432-3p 0 0 1
chr20:2865153|2865492 hsa-miR-193b-5p 0 0 1
chr20:2865153|2865492 hsa-miR-193b-3p 0 0 1
chr20:2865153|2865492 hsa-miR-578 0 0 1
chr20:2865153|2865492 hsa-miR-592 0 0 1
chr20:2865153|2865492 hsa-miR-596 0 0 1
chr20:2865153|2865492 hsa-miR-597-5p 0 0 1
chr20:2865153|2865492 hsa-miR-597-3p 0 0 1
chr20:2865153|2865492 hsa-miR-601 0 1 1
chr20:2865153|2865492 hsa-miR-640 0 0 1
chr20:2865153|2865492 hsa-miR-645 0 0 1
chr20:2865153|2865492 hsa-miR-661 1 1 1
chr20:2865153|2865492 hsa-miR-758-5p 0 0 1
chr20:2865153|2865492 hsa-miR-758-3p 0 0 1
chr20:2865153|2865492 hsa-miR-892a 0 0 1
chr20:2865153|2865492 hsa-miR-708-5p 0 0 1
chr20:2865153|2865492 hsa-miR-708-3p 0 0 1
chr20:2865153|2865492 hsa-miR-940 0 0 1
chr20:2865153|2865492 hsa-miR-942-5p 0 0 1
chr20:2865153|2865492 hsa-miR-942-3p 0 0 1
chr20:2865153|2865492 hsa-miR-1236-5p 0 0 1
chr20:2865153|2865492 hsa-miR-1236-3p 0 0 1
chr20:2865153|2865492 hsa-miR-1202 1 1 1
chr20:2865153|2865492 hsa-miR-1205 0 0 1
chr20:2865153|2865492 hsa-miR-1286 0 0 1
chr20:2865153|2865492 hsa-miR-1293 0 1 1
chr20:2865153|2865492 hsa-miR-1251-5p 0 0 1
chr20:2865153|2865492 hsa-miR-1251-3p 0 0 1
chr20:2865153|2865492 hsa-miR-1262 0 0 1
chr20:2865153|2865492 hsa-miR-1827 0 0 1
chr20:2865153|2865492 hsa-miR-296-5p 0 0 1
chr20:2865153|2865492 hsa-miR-1184 0 0 1
chr20:2865153|2865492 hsa-miR-361-3p 0 1 1
chr20:2865153|2865492 hsa-miR-28-5p 0 0 1
chr20:2865153|2865492 hsa-miR-320b 1 1 1
chr20:2865153|2865492 hsa-miR-320c 1 1 1
chr20:2865153|2865492 hsa-miR-320d 0 1 1
chr20:2865153|2865492 hsa-miR-193a-3p 0 0 1
chr20:2865153|2865492 hsa-miR-323-5p 0 0 1
chr20:2865153|2865492 hsa-miR-768-5p 0 0 1
chr20:2865153|2865492 hsa-miR-1826 0 0 1
chr20:2865153|2865492 hsa-miR-608 1 0 0
chr20:2865153|2865492 hsa-miR-639 1 0 0
chr20:2865153|2865492 hsa-miR-1231 1 0 0
chr20:2865153|2865492 hsa-miR-1913 1 0 0
chr20:2865153|2865492 hsa-miR-3137 1 1 0
chr20:2865153|2865492 hsa-miR-320e 0 1 0
chr20:2865153|2865492 hsa-miR-3909 1 0 0
chr20:2865153|2865492 hsa-miR-378g 0 1 0
chr20:2865153|2865492 hsa-miR-4429 1 1 0
chr20:2865153|2865492 hsa-miR-4506 0 1 0
chr20:2865153|2865492 hsa-miR-4515 1 1 0
chr20:2865153|2865492 hsa-miR-4518 1 0 0
chr20:2865153|2865492 hsa-miR-4525 1 0 0
chr20:2865153|2865492 hsa-miR-4538 1 0 0
chr20:2865153|2865492 hsa-miR-4651 1 0 0
chr20:2865153|2865492 hsa-miR-4657 0 1 0
chr20:2865153|2865492 hsa-miR-4736 0 1 0
chr20:2865153|2865492 hsa-miR-5787 1 0 0
chr20:2865153|2865492 hsa-miR-9899 1 0 0
chr20:2865153|2865492 hsa-miR-12128 0 1 0
chr20:2865153|2865492 hsa-miR-135a-3p 1 0 0
chr20:2865153|2865492 hsa-miR-323a-5p 0 1 0
chr20:2865153|2865492 hsa-miR-3157-5p 0 1 0
chr20:2865153|2865492 hsa-miR-6747-5p 0 1 0
chr20:2865153|2865492 hsa-miR-6720-5p 1 0 0
chr20:2865153|2865492 hsa-miR-766-3p 1 0 0
chr20:2865153|2865492 hsa-miR-6804-5p 0 1 0
chr20:2865153|2865492 hsa-miR-6757-5p 1 1 0
chr20:2865153|2865492 hsa-miR-6746-5p 1 1 0
chr20:2865153|2865492 hsa-miR-4722-5p 1 1 0
chr20:2865153|2865492 hsa-miR-7108-5p 1 0 0
chr20:2865153|2865492 hsa-miR-1292-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6748-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6732-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6782-5p 1 0 0
chr20:2865153|2865492 hsa-miR-5006-5p 1 1 0
chr20:2865153|2865492 hsa-miR-6850-5p 0 1 0
chr20:2865153|2865492 hsa-miR-1343-3p 1 1 0
chr20:2865153|2865492 hsa-miR-939-3p 0 1 0
chr20:2865153|2865492 hsa-miR-1226-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6753-5p 1 0 0
chr20:2865153|2865492 hsa-miR-4787-5p 1 0 0
chr20:2865153|2865492 hsa-miR-7156-3p 0 1 0
chr20:2865153|2865492 hsa-miR-6720-3p 1 0 0
chr20:2865153|2865492 hsa-miR-1180-5p 0 1 0
chr20:2865153|2865492 hsa-miR-328-3p 0 1 0
chr20:2865153|2865492 hsa-miR-4524a-3p 0 1 0
chr20:2865153|2865492 hsa-miR-6767-3p 0 1 0
chr20:2865153|2865492 hsa-miR-5584-3p 0 1 0
chr20:2865153|2865492 hsa-miR-4524b-3p 0 1 0
chr20:2865153|2865492 hsa-miR-99a-3p 0 1 0
chr20:2865153|2865492 hsa-miR-1207-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6893-5p 0 1 0
chr20:2865153|2865492 hsa-miR-6737-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6752-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6754-5p 0 1 0
chr20:2865153|2865492 hsa-miR-6756-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6803-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6819-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6851-5p 1 1 0
chr20:2865153|2865492 hsa-miR-7110-5p 1 1 0
chr20:2865153|2865492 hsa-miR-6722-3p 1 0 0
chr20:2865153|2865492 hsa-miR-6751-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6808-5p 0 1 0
chr20:2865153|2865492 hsa-miR-7111-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6754-3p 1 1 0
chr20:2865153|2865492 hsa-miR-4685-5p 1 1 0
chr20:2865153|2865492 hsa-miR-6735-5p 0 1 0
chr20:2865153|2865492 hsa-miR-7843-5p 0 1 0
chr20:2865153|2865492 hsa-miR-4722-3p 1 0 0
chr20:2865153|2865492 hsa-miR-6837-5p 1 1 0
chr20:2865153|2865492 hsa-miR-4756-5p 1 0 0
chr20:2865153|2865492 hsa-miR-6783-3p 0 1 0
chr20:2865153|2865492 hsa-miR-370-5p 0 1 0
chr20:2865153|2865492 hsa-miR-9983-3p 0 1 0
chr20:2865153|2865492 hsa-miR-6505-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr20:2865153|2865492
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MWVPGPPASPATPPSPAFLQALVAEADCPGRFGRLGRAREVFQEQEITHWL
Nucleotide Sequence ATGTGGGTCCCAGGACCACCTGCCTCTCCTGCAACACCTCCAAGCCCAGCTTTCCTGCAGGCTCTGGTGGCTGAAGCTGACTGCCCTGGCAGATTTGGAAGATTGGGAAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTGGCTA

CircID chr20:2865153|2865492
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKR
Nucleotide Sequence ATGCGGCTCCTACGGCTGCAGCGGCGCCTAGAAGACGAGCTGGGGGGCCAGTTCCTAGACCTGTCTCTACATGACACAGTTACCACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGTAG

CircID chr20:2865153|2865492
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MPLLQHLQAQLSCRLWWLKLTALADLEDWEELEKFSKSKKSPIGY
Nucleotide Sequence CTGCCTCTCCTGCAACACCTCCAAGCCCAGCTTTCCTGCAGGCTCTGGTGGCTGAAGCTGACTGCCCTGGCAGATTTGGAAGATTGGGAAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTGGCTAC

CircID chr20:2865153|2865492
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MTQLPPSFLAVTTSVQSSWHVTSASLTRGR
Nucleotide Sequence ATGACACAGTTACCACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGTAGGTGA

CircID chr20:2865153|2865492
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MHVGPRTTCLSCNTSKPSFPAGSGG
Nucleotide Sequence CTGCATGTGGGTCCCAGGACCACCTGCCTCTCCTGCAACACCTCCAAGCCCAGCTTTCCTGCAGGCTCTGGTGGCTGA

CircID chr20:2865153|2865492
ORF Type ORF6
Protein Length 52
Nucleotide Length 159
Protein Sequence MGLEVLQERQVVLGPTCSLGPHLPLVRDAEVTCQLLCTLVVTAKNEGGNCVM
Nucleotide Sequence CTGGGCTTGGAGGTGTTGCAGGAGAGGCAGGTGGTCCTGGGACCCACATGCAGCCTGGGCCCTCACCTACCTCTTGTCAGGGATGCGGAAGTCACGTGCCAGCTGCTCTGCACGCTTGTTGTGACCGCCAAGAATGAGGGTGGTAACTGTGTCATGTAG

CircID chr20:2865153|2865492
ORF Type ORF7
Protein Length 73
Nucleotide Length 222
Protein Sequence MGDFLLLENFSSSSQSSKSARAVSFSHQSLQESWAWRCCRRGRWSWDPHAAWALTYLLSGMRKSRASCSARLL
Nucleotide Sequence ATGGGTGATTTCTTGCTCTTGGAAAACTTCTCTAGCTCTTCCCAATCTTCCAAATCTGCCAGGGCAGTCAGCTTCAGCCACCAGAGCCTGCAGGAAAGCTGGGCTTGGAGGTGTTGCAGGAGAGGCAGGTGGTCCTGGGACCCACATGCAGCCTGGGCCCTCACCTACCTCTTGTCAGGGATGCGGAAGTCACGTGCCAGCTGCTCTGCACGCTTGTTGTGA

CircID chr20:2865153|2865492
ORF Type ORF8
Protein Length 31
Nucleotide Length 96
Protein Sequence MRVVTVSCRDRSRNWPPSSSSRRRCSRRSRI
Nucleotide Sequence ATGAGGGTGGTAACTGTGTCATGTAGAGACAGGTCTAGGAACTGGCCCCCCAGCTCGTCTTCTAGGCGCCGCTGCAGCCGTAGGAGCCGCATTTGA

CircID chr20:2865153|2865492
ORF Type ORF9
Protein Length 59
Nucleotide Length 180
Protein Sequence MPGQSASATRACRKAGLGGVAGEAGGPGTHMQPGPSPTSCQGCGSHVPAALHACCDRQE
Nucleotide Sequence CTGCCAGGGCAGTCAGCTTCAGCCACCAGAGCCTGCAGGAAAGCTGGGCTTGGAGGTGTTGCAGGAGAGGCAGGTGGTCCTGGGACCCACATGCAGCCTGGGCCCTCACCTACCTCTTGTCAGGGATGCGGAAGTCACGTGCCAGCTGCTCTGCACGCTTGTTGTGACCGCCAAGAATGA

CircID chr20:2865153|2865492
ORF Type ORF10
Protein Length 29
Nucleotide Length 87
Protein Sequence MCHVETGLGTGPPARLLGAAAAVGAAFDP
Nucleotide Sequence CTGTGTCATGTAGAGACAGGTCTAGGAACTGGCCCCCCAGCTCGTCTTCTAGGCGCCGCTGCAGCCGTAGGAGCCGCATTTGATCCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites