CircRNA Information

General Information
circRNA Basic Information
CircID chr20:31665620|31665838
Strand +
CircType exon
Host Gene ENSG00000171552.11;
Algorism CIRI2;
Sequence CTGCCCATCACAGGGTTGGGCCCAGATCTGGTCCCTTGCAGCTAGTTTTCTAGAATTTATCACACTTCTGTGAGACCCCCACACCTCAGTTCCCTTGGCCTCAGAATTCACAAAATTTCCACAAAATCTGTCCAAAGGAGGCTGGCAGGTATGGAAGGGTTTGTGGCTGGGGGCAGGAGGGCCCTACCTGATTGGTGCAACCCTTACCCCTTAGCCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:31665620|31665838 hsa-miR-22-5p 0 0 1
chr20:31665620|31665838 hsa-miR-22-3p 0 0 1
chr20:31665620|31665838 hsa-miR-10a-5p 0 0 1
chr20:31665620|31665838 hsa-miR-10a-3p 0 0 1
chr20:31665620|31665838 hsa-miR-10b-5p 0 0 1
chr20:31665620|31665838 hsa-miR-10b-3p 0 0 1
chr20:31665620|31665838 hsa-miR-555 0 0 1
chr20:31665620|31665838 hsa-miR-587 0 0 1
chr20:31665620|31665838 hsa-miR-595 0 0 1
chr20:31665620|31665838 hsa-miR-612 0 0 1
chr20:31665620|31665838 hsa-miR-758-5p 0 0 1
chr20:31665620|31665838 hsa-miR-758-3p 0 0 1
chr20:31665620|31665838 hsa-miR-1296-5p 0 0 1
chr20:31665620|31665838 hsa-miR-1296-3p 0 0 1
chr20:31665620|31665838 hsa-miR-1202 0 1 1
chr20:31665620|31665838 hsa-miR-1257 0 0 1
chr20:31665620|31665838 hsa-miR-296-5p 0 0 1
chr20:31665620|31665838 hsa-miR-491-5p 0 0 1
chr20:31665620|31665838 hsa-miR-296-3p 1 0 1
chr20:31665620|31665838 hsa-miR-767-5p 0 0 1
chr20:31665620|31665838 hsa-miR-361-3p 0 1 1
chr20:31665620|31665838 hsa-miR-324-3p 0 0 1
chr20:31665620|31665838 hsa-miR-518d-5p 0 0 1
chr20:31665620|31665838 hsa-miR-519b-5p 0 0 1
chr20:31665620|31665838 hsa-miR-519c-5p 0 0 1
chr20:31665620|31665838 hsa-miR-520c-5p 0 0 1
chr20:31665620|31665838 hsa-miR-342-3p 0 0 1
chr20:31665620|31665838 hsa-miR-1285 0 0 1
chr20:31665620|31665838 hsa-miR-526a 0 0 1
chr20:31665620|31665838 hsa-miR-940 1 0 0
chr20:31665620|31665838 hsa-miR-1299 1 0 0
chr20:31665620|31665838 hsa-miR-1976 0 1 0
chr20:31665620|31665838 hsa-miR-3138 1 0 0
chr20:31665620|31665838 hsa-miR-3147 1 0 0
chr20:31665620|31665838 hsa-miR-4290 0 1 0
chr20:31665620|31665838 hsa-miR-4471 0 1 0
chr20:31665620|31665838 hsa-miR-4475 0 1 0
chr20:31665620|31665838 hsa-miR-3972 0 1 0
chr20:31665620|31665838 hsa-miR-4657 1 0 0
chr20:31665620|31665838 hsa-miR-6069 1 0 0
chr20:31665620|31665838 hsa-miR-6860 1 0 0
chr20:31665620|31665838 hsa-miR-8059 0 1 0
chr20:31665620|31665838 hsa-miR-8089 1 0 0
chr20:31665620|31665838 hsa-miR-12119 0 1 0
chr20:31665620|31665838 hsa-miR-6765-5p 1 0 0
chr20:31665620|31665838 hsa-miR-766-3p 0 1 0
chr20:31665620|31665838 hsa-miR-6089 1 0 0
chr20:31665620|31665838 hsa-miR-593-5p 0 1 0
chr20:31665620|31665838 hsa-miR-6840-5p 0 1 0
chr20:31665620|31665838 hsa-miR-6796-5p 1 1 0
chr20:31665620|31665838 hsa-miR-6881-5p 1 1 0
chr20:31665620|31665838 hsa-miR-6782-5p 1 1 0
chr20:31665620|31665838 hsa-miR-6835-5p 1 0 0
chr20:31665620|31665838 hsa-miR-4691-3p 0 1 0
chr20:31665620|31665838 hsa-miR-4667-3p 0 1 0
chr20:31665620|31665838 hsa-miR-2276-3p 0 1 0
chr20:31665620|31665838 hsa-miR-7850-5p 0 1 0
chr20:31665620|31665838 hsa-miR-7160-3p 0 1 0
chr20:31665620|31665838 hsa-miR-664b-5p 0 1 0
chr20:31665620|31665838 hsa-miR-4687-5p 0 1 0
chr20:31665620|31665838 hsa-miR-7158-3p 1 0 0
chr20:31665620|31665838 hsa-miR-6886-3p 0 1 0
chr20:31665620|31665838 hsa-miR-4749-3p 1 1 0
chr20:31665620|31665838 hsa-miR-328-3p 1 0 0
chr20:31665620|31665838 hsa-miR-449b-3p 0 1 0
chr20:31665620|31665838 hsa-miR-4727-5p 0 1 0
chr20:31665620|31665838 hsa-miR-1298-3p 0 1 0
chr20:31665620|31665838 hsa-miR-4763-3p 1 0 0
chr20:31665620|31665838 hsa-miR-6726-5p 0 1 0
chr20:31665620|31665838 hsa-miR-6752-5p 1 0 0
chr20:31665620|31665838 hsa-miR-6803-5p 1 0 0
chr20:31665620|31665838 hsa-miR-10401-5p 1 0 0
chr20:31665620|31665838 hsa-miR-6722-3p 1 0 0
chr20:31665620|31665838 hsa-miR-6751-5p 1 0 0
chr20:31665620|31665838 hsa-miR-6779-5p 1 0 0
chr20:31665620|31665838 hsa-miR-1909-3p 1 0 0
chr20:31665620|31665838 hsa-miR-4649-5p 1 0 0
chr20:31665620|31665838 hsa-miR-6729-5p 1 0 0
chr20:31665620|31665838 hsa-miR-6735-5p 1 0 0
chr20:31665620|31665838 hsa-miR-3187-5p 1 0 0
chr20:31665620|31665838 hsa-miR-939-5p 0 1 0
chr20:31665620|31665838 hsa-miR-6791-3p 0 1 0
chr20:31665620|31665838 hsa-miR-6750-5p 0 1 0
chr20:31665620|31665838 hsa-miR-5591-5p 0 1 0
chr20:31665620|31665838 hsa-miR-6822-5p 0 1 0
chr20:31665620|31665838 hsa-miR-4722-3p 0 1 0
chr20:31665620|31665838 hsa-miR-6727-3p 0 1 0
chr20:31665620|31665838 hsa-miR-6893-3p 1 0 0
chr20:31665620|31665838 hsa-miR-3144-3p 0 1 0
chr20:31665620|31665838 hsa-miR-4661-5p 0 1 0
chr20:31665620|31665838 hsa-miR-3136-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr20:31665620|31665838
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MAGMEGFVAGGRRALPDWCNPYPLAS
Nucleotide Sequence CTGGCAGGTATGGAAGGGTTTGTGGCTGGGGGCAGGAGGGCCCTACCTGATTGGTGCAACCCTTACCCCTTAGCCTCC

CircID chr20:31665620|31665838
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MASEFTKFPQNLSKGGWQVWKGLWLGAGGPYLIGATLTP
Nucleotide Sequence TTGGCCTCAGAATTCACAAAATTTCCACAAAATCTGTCCAAAGGAGGCTGGCAGGTATGGAAGGGTTTGTGGCTGGGGGCAGGAGGGCCCTACCTGATTGGTGCAACCCTTACCCCTTAG

CircID chr20:31665620|31665838
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MDRFCGNFVNSEAKGTEVWGSHRSVINSRKLAARDQIWAQPCDGQ
Nucleotide Sequence TTGGACAGATTTTGTGGAAATTTTGTGAATTCTGAGGCCAAGGGAACTGAGGTGTGGGGGTCTCACAGAAGTGTGATAAATTCTAGAAAACTAGCTGCAAGGGACCAGATCTGGGCCCAACCCTGTGATGGGCAG

CircID chr20:31665620|31665838
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MHQSGRALLPPATNPSIPASLLWTDFVEIL
Nucleotide Sequence TTGCACCAATCAGGTAGGGCCCTCCTGCCCCCAGCCACAAACCCTTCCATACCTGCCAGCCTCCTTTGGACAGATTTTGTGGAAATTTTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites