CircNet

General Information

circRNA Basic Information

CircID	chr20:31898473\|31909922
Strand	+
CircType	exon
Host Gene	ENSG00000131044.16;
Algorism	find_circ;CIRI2;CIRC
Sequence	AGAGCAGAGAGCATCGATCCGGTTCAAGACCACCCTCATGAACACACTCATGGACGTCCTTCGCCACAGGCCAGGATGGGTGGAAGTGAAGGAATACTTACCTGGCAGGGGAAATGCCATGAGTGGAAGGAGGTTTTCTCAGGGCAAGGCTCATGTATTGCTCTCCCGATGTGCTGACCCCTGCGATTTTCTCCAATGTGGGAAACTCGATTGTGTAATTTATGATGGTCGGAGACTGGGAAGGTGGAAAGAACCTGAATCTCCACCGAAGGGGAGTGGGATTTCTACTGGTGTGACGTCAGCTGGCTCCGGGAGAACTTCGACCACACCTACATGGATGAACATGTGCGGATCAGTCACTTCCGGAACCACTATGAGCTGACCCGGAAGAACTACATGGTGAAGAACCTGAAGCGGTTCCGGAAGCAGCTGGAGCGTGAGGCAGGAAAGCTGGAGGCAGCCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCCTTGCGAGTACCACCTGTTTGTAGAGGAGTTTCGCAAAAACCCAGGAATCACCTGGATCATGAAGCCT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr20:31898473\|31909922	hsa-miR-22-5p	1	1
chr20:31898473\|31909922	hsa-miR-125a-3p	1	1
chr20:31898473\|31909922	hsa-miR-224-5p	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:31898473\|31909922
ORF Type	ORF1
Protein Length	115
Nucleotide Length	345
Protein Sequence	MNTLMDVLRHRPGWVEVKEYLPGRGNAMSGRRFSQGKAHVLLSRCADPCDFLQCGKLDCVIYDGRRLGRWKEPESPPKGSGISTGVTSAGSGRTSTTPTWMNMCGSVTSGTTMS*
Nucleotide Sequence	ATGAACACACTCATGGACGTCCTTCGCCACAGGCCAGGATGGGTGGAAGTGAAGGAATACTTACCTGGCAGGGGAAATGCCATGAGTGGAAGGAGGTTTTCTCAGGGCAAGGCTCATGTATTGCTCTCCCGATGTGCTGACCCCTGCGATTTTCTCCAATGTGGGAAACTCGATTGTGTAATTTATGATGGTCGGAGACTGGGAAGGTGGAAAGAACCTGAATCTCCACCGAAGGGGAGTGGGATTTCTACTGGTGTGACGTCAGCTGGCTCCGGGAGAACTTCGACCACACCTACATGGATGAACATGTGCGGATCAGTCACTTCCGGAACCACTATGAGCTGA

CircID	chr20:31898473\|31909922
ORF Type	ORF2
Protein Length	77
Nucleotide Length	231
Protein Sequence	MDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPKTFEMPCEYHLFVEEFRKNPGITWIMKP
Nucleotide Sequence	ATGGATGAACATGTGCGGATCAGTCACTTCCGGAACCACTATGAGCTGACCCGGAAGAACTACATGGTGAAGAACCTGAAGCGGTTCCGGAAGCAGCTGGAGCGTGAGGCAGGAAAGCTGGAGGCAGCCAAGTGTGACTTCTTCCCCAAAACCTTTGAGATGCCTTGCGAGTACCACCTGTTTGTAGAGGAGTTTCGCAAAAACCCAGGAATCACCTGGATCATGAAGCCT

CircID	chr20:31898473\|31909922
ORF Type	ORF3
Protein Length	55
Nucleotide Length	165
Protein Sequence	MIQVIPGFLRNSSTNRWYSQGISKVLGKKSHLAASSFPASRSSCFRNRFRFFTM*
Nucleotide Sequence	ATGATCCAGGTGATTCCTGGGTTTTTGCGAAACTCCTCTACAAACAGGTGGTACTCGCAAGGCATCTCAAAGGTTTTGGGGAAGAAGTCACACTTGGCTGCCTCCAGCTTTCCTGCCTCACGCTCCAGCTGCTTCCGGAACCGCTTCAGGTTCTTCACCATGTAG

CircID	chr20:31898473\|31909922
ORF Type	ORF4
Protein Length	97
Nucleotide Length	291
Protein Sequence	VVLARHLKGFGEEVTLGCLQLSCLTLQLLPEPLQVLHHVVLPGQLIVVPEVTDPHMFIHVGVVEVLPEPADVTPVEIPLPFGGDSGSFHLPSLRPS*
Nucleotide Sequence	GTGGTACTCGCAAGGCATCTCAAAGGTTTTGGGGAAGAAGTCACACTTGGCTGCCTCCAGCTTTCCTGCCTCACGCTCCAGCTGCTTCCGGAACCGCTTCAGGTTCTTCACCATGTAGTTCTTCCGGGTCAGCTCATAGTGGTTCCGGAAGTGACTGATCCGCACATGTTCATCCATGTAGGTGTGGTCGAAGTTCTCCCGGAGCCAGCTGACGTCACACCAGTAGAAATCCCACTCCCCTTCGGTGGAGATTCAGGTTCTTTCCACCTTCCCAGTCTCCGACCATCATAA

CircID	chr20:31898473\|31909922
ORF Type	ORF5
Protein Length	40
Nucleotide Length	120
Protein Sequence	MAFPLPGKYSFTSTHPGLWRRTSMSVFMRVVLNRIDALCS
Nucleotide Sequence	ATGGCATTTCCCCTGCCAGGTAAGTATTCCTTCACTTCCACCCATCCTGGCCTGTGGCGAAGGACGTCCATGAGTGTGTTCATGAGGGTGGTCTTGAACCGGATCGATGCTCTCTGCTCT

CircID	chr20:31898473\|31909922
ORF Type	ORF6
Protein Length	34
Nucleotide Length	102
Protein Sequence	MGGSEGILTWQGKCHEWKEVFSGQGSCIALPMC*
Nucleotide Sequence	ATGGGTGGAAGTGAAGGAATACTTACCTGGCAGGGGAAATGCCATGAGTGGAAGGAGGTTTTCTCAGGGCAAGGCTCATGTATTGCTCTCCCGATGTGCTGA

CircID	chr20:31898473\|31909922
ORF Type	ORF7
Protein Length	73
Nucleotide Length	219
Protein Sequence	VEIQVLSTFPVSDHHKLHNRVSHIGENRRGQHIGRAIHEPCPEKTSFHSWHFPCQVSIPSLPPILACGEGRP*
Nucleotide Sequence	GTGGAGATTCAGGTTCTTTCCACCTTCCCAGTCTCCGACCATCATAAATTACACAATCGAGTTTCCCACATTGGAGAAAATCGCAGGGGTCAGCACATCGGGAGAGCAATACATGAGCCTTGCCCTGAGAAAACCTCCTTCCACTCATGGCATTTCCCCTGCCAGGTAAGTATTCCTTCACTTCCACCCATCCTGGCCTGTGGCGAAGGACGTCCATGA

CircID	chr20:31898473\|31909922
ORF Type	ORF8
Protein Length	64
Nucleotide Length	192
Protein Sequence	FLGFCETPLQTGGTRKASQRFWGRSHTWLPPAFLPHAPAASGTASGSSPCSSSGSAHSGSGSD*
Nucleotide Sequence	TTCCTGGGTTTTTGCGAAACTCCTCTACAAACAGGTGGTACTCGCAAGGCATCTCAAAGGTTTTGGGGAAGAAGTCACACTTGGCTGCCTCCAGCTTTCCTGCCTCACGCTCCAGCTGCTTCCGGAACCGCTTCAGGTTCTTCACCATGTAGTTCTTCCGGGTCAGCTCATAGTGGTTCCGGAAGTGACTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Downstream Sites	Number of Circ Exons Sites
chr20:31898473\|31909922	FAM120A	0	1
chr20:31898473\|31909922	UPF1	1	0
chr20:31898473\|31909922	SRSF10	0	1
chr20:31898473\|31909922	TAF15	0	2
chr20:31898473\|31909922	TROVE2	0	9
chr20:31898473\|31909922	SRSF7	0	3
chr20:31898473\|31909922	SRSF1	0	1
chr20:31898473\|31909922	ADAR	0	2
chr20:31898473\|31909922	U2AF2	0	1
chr20:31898473\|31909922	SRSF9	0	1
chr20:31898473\|31909922	MBNL1	0	7
chr20:31898473\|31909922	METTL14	0	19
chr20:31898473\|31909922	ZNF184	0	1
chr20:31898473\|31909922	WTAP	0	11
chr20:31898473\|31909922	DDX3X	0	9
chr20:31898473\|31909922	IGF2BP2	0	1
chr20:31898473\|31909922	FTO	0	7
chr20:31898473\|31909922	METTL3	0	21
chr20:31898473\|31909922	TARBP2	0	2
chr20:31898473\|31909922	DKC1	0	1
chr20:31898473\|31909922	AIFM1	0	1
chr20:31898473\|31909922	AGO1	1	0

CircRNA Information