CircRNA Information

General Information
circRNA Basic Information
CircID chr20:32101389|32101554
Strand +
CircType exon
Host Gene ENSG00000101336.11;
Algorism CIRI2;
Sequence CTGGGCACCCCCTGGCCCTGCCCTGGTCCTCCCTATCATGGCTGCTGTTGGTACTGGCTCTCTGTGGCCGTGTAGAAGTCATCCAGCACACTCTGGATGTATTCGAAGGTCGGCCGCTCCTCCGGACGGTTTTTCCAGCAGCGCATCATGATGTTGTAGAGCTCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:32101389|32101554 hsa-miR-433-5p 0 0 1
chr20:32101389|32101554 hsa-miR-433-3p 0 0 1
chr20:32101389|32101554 hsa-miR-575 0 1 1
chr20:32101389|32101554 hsa-miR-602 0 0 1
chr20:32101389|32101554 hsa-miR-617 0 0 1
chr20:32101389|32101554 hsa-miR-648 0 0 1
chr20:32101389|32101554 hsa-miR-765 0 0 1
chr20:32101389|32101554 hsa-miR-708-5p 0 0 1
chr20:32101389|32101554 hsa-miR-708-3p 0 0 1
chr20:32101389|32101554 hsa-miR-1203 0 0 1
chr20:32101389|32101554 hsa-miR-1287-5p 0 0 1
chr20:32101389|32101554 hsa-miR-1287-3p 0 0 1
chr20:32101389|32101554 hsa-miR-1255a 0 0 1
chr20:32101389|32101554 hsa-miR-1321 0 0 1
chr20:32101389|32101554 hsa-miR-1322 0 1 1
chr20:32101389|32101554 hsa-miR-770-5p 1 1 1
chr20:32101389|32101554 hsa-miR-1283 0 0 1
chr20:32101389|32101554 hsa-miR-574-5p 0 1 1
chr20:32101389|32101554 hsa-miR-525-5p 0 0 1
chr20:32101389|32101554 hsa-miR-28-5p 0 1 1
chr20:32101389|32101554 hsa-miR-875-3p 0 0 1
chr20:32101389|32101554 hsa-miR-1207-5p 1 0 1
chr20:32101389|32101554 hsa-miR-342-5p 0 0 1
chr20:32101389|32101554 hsa-miR-520a-5p 0 0 1
chr20:32101389|32101554 hsa-miR-548d-3p 0 0 1
chr20:32101389|32101554 hsa-miR-1255b 0 0 1
chr20:32101389|32101554 hsa-miR-612 1 0 0
chr20:32101389|32101554 hsa-miR-663a 1 0 0
chr20:32101389|32101554 hsa-miR-762 1 0 0
chr20:32101389|32101554 hsa-miR-3131 0 1 0
chr20:32101389|32101554 hsa-miR-3137 1 0 0
chr20:32101389|32101554 hsa-miR-3139 0 1 0
chr20:32101389|32101554 hsa-miR-4270 1 1 0
chr20:32101389|32101554 hsa-miR-1268b 1 0 0
chr20:32101389|32101554 hsa-miR-4739 1 1 0
chr20:32101389|32101554 hsa-miR-6090 1 0 0
chr20:32101389|32101554 hsa-miR-6132 0 1 0
chr20:32101389|32101554 hsa-miR-6133 1 0 0
chr20:32101389|32101554 hsa-miR-6860 1 0 0
chr20:32101389|32101554 hsa-miR-12122 0 1 0
chr20:32101389|32101554 hsa-miR-135a-3p 0 1 0
chr20:32101389|32101554 hsa-miR-432-3p 0 1 0
chr20:32101389|32101554 hsa-miR-6861-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6894-5p 1 1 0
chr20:32101389|32101554 hsa-miR-4687-3p 1 0 0
chr20:32101389|32101554 hsa-miR-6799-5p 1 0 0
chr20:32101389|32101554 hsa-miR-3692-5p 1 0 0
chr20:32101389|32101554 hsa-miR-7847-3p 1 0 0
chr20:32101389|32101554 hsa-miR-7154-3p 0 1 0
chr20:32101389|32101554 hsa-miR-6806-5p 1 0 0
chr20:32101389|32101554 hsa-miR-4655-5p 1 1 0
chr20:32101389|32101554 hsa-miR-7845-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6829-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6732-5p 0 1 0
chr20:32101389|32101554 hsa-miR-5006-5p 1 0 0
chr20:32101389|32101554 hsa-miR-1226-5p 1 0 0
chr20:32101389|32101554 hsa-miR-1229-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6784-5p 1 0 0
chr20:32101389|32101554 hsa-miR-4640-5p 1 1 0
chr20:32101389|32101554 hsa-miR-6753-5p 1 1 0
chr20:32101389|32101554 hsa-miR-1228-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6771-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6823-5p 1 0 0
chr20:32101389|32101554 hsa-miR-149-3p 1 0 0
chr20:32101389|32101554 hsa-miR-6824-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6789-5p 1 0 0
chr20:32101389|32101554 hsa-miR-3162-5p 1 1 0
chr20:32101389|32101554 hsa-miR-4776-5p 1 1 0
chr20:32101389|32101554 hsa-miR-7112-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6895-5p 0 1 0
chr20:32101389|32101554 hsa-miR-1250-5p 1 0 0
chr20:32101389|32101554 hsa-miR-338-5p 0 1 0
chr20:32101389|32101554 hsa-miR-4763-3p 1 1 0
chr20:32101389|32101554 hsa-miR-6775-5p 1 0 0
chr20:32101389|32101554 hsa-miR-1343-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6743-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6819-5p 1 0 0
chr20:32101389|32101554 hsa-miR-1249-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6763-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6774-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6808-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6879-5p 1 1 0
chr20:32101389|32101554 hsa-miR-7111-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6836-5p 0 1 0
chr20:32101389|32101554 hsa-miR-10396b-5p 1 0 0
chr20:32101389|32101554 hsa-miR-4632-5p 0 1 0
chr20:32101389|32101554 hsa-miR-4649-5p 1 0 0
chr20:32101389|32101554 hsa-miR-4685-5p 1 1 0
chr20:32101389|32101554 hsa-miR-4726-5p 1 1 0
chr20:32101389|32101554 hsa-miR-4749-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6729-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6735-5p 0 1 0
chr20:32101389|32101554 hsa-miR-6794-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6795-5p 1 0 0
chr20:32101389|32101554 hsa-miR-6858-5p 1 0 0
chr20:32101389|32101554 hsa-miR-4436b-3p 0 1 0
chr20:32101389|32101554 hsa-miR-4664-5p 0 1 0
chr20:32101389|32101554 hsa-miR-7843-5p 0 1 0
chr20:32101389|32101554 hsa-miR-3173-3p 1 0 0
chr20:32101389|32101554 hsa-miR-6837-5p 1 1 0
chr20:32101389|32101554 hsa-miR-4676-5p 0 1 0
chr20:32101389|32101554 hsa-miR-6820-3p 0 1 0
chr20:32101389|32101554 hsa-miR-6505-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:32101389|32101554
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MVLPIMAAVGTGSLWPCRSHPAHSGCIRRSAAPPDGFSSSAS
Nucleotide Sequence CTGGTCCTCCCTATCATGGCTGCTGTTGGTACTGGCTCTCTGTGGCCGTGTAGAAGTCATCCAGCACACTCTGGATGTATTCGAAGGTCGGCCGCTCCTCCGGACGGTTTTTCCAGCAGCGCATCATGA
CircID chr20:32101389|32101554
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MALPWSSLSWLLLVLALCGRVEVIQHTLDVFEGRPLLRTVFPAAHHDVVEL
Nucleotide Sequence CTGGCCCTGCCCTGGTCCTCCCTATCATGGCTGCTGTTGGTACTGGCTCTCTGTGGCCGTGTAGAAGTCATCCAGCACACTCTGGATGTATTCGAAGGTCGGCCGCTCCTCCGGACGGTTTTTCCAGCAGCGCATCATGATGTTGTAGAGCTC
CircID chr20:32101389|32101554
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MTSTRPQRASTNSSHDREDQGRARGCP
Nucleotide Sequence ATGACTTCTACACGGCCACAGAGAGCCAGTACCAACAGCAGCCATGATAGGGAGGACCAGGGCAGGGCCAGGGGGTGCCCA
CircID chr20:32101389|32101554
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MMRCWKNRPEERPTFEYIQSVLDDFYTATESQYQQQP
Nucleotide Sequence ATGATGCGCTGCTGGAAAAACCGTCCGGAGGAGCGGCCGACCTTCGAATACATCCAGAGTGTGCTGGATGACTTCTACACGGCCACAGAGAGCCAGTACCAACAGCAGCCATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab