CircRNA Information

General Information
circRNA Basic Information
CircID chr20:33853937|33854141
Strand +
CircType exon
Host Gene ENSG00000101421.3;
Algorism CIRI2;
Sequence CAGGGGAGCAAGGGGGTGAGGAGTGGGCCAGAGTGGTAAACACAGGGCCAATACACAGGTGATGGACAGAAACACAGCTCTGGAGGAAATCAAAATCAGATGCATTATTACAGCTAAGGGCAAGGAAAAGCCTATGGCTTTTGAAAAATGACTTTTCTGCCAGTACCGTACAAGTACACAAAGAGATGTGCGGCAAGTCAACTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:33853937|33854141 hsa-miR-328-5p 0 0 1
chr20:33853937|33854141 hsa-miR-328-3p 0 0 1
chr20:33853937|33854141 hsa-miR-193b-5p 0 0 1
chr20:33853937|33854141 hsa-miR-193b-3p 0 0 1
chr20:33853937|33854141 hsa-miR-599 0 0 1
chr20:33853937|33854141 hsa-miR-607 0 0 1
chr20:33853937|33854141 hsa-miR-874-5p 0 0 1
chr20:33853937|33854141 hsa-miR-874-3p 0 0 1
chr20:33853937|33854141 hsa-miR-892b 0 0 1
chr20:33853937|33854141 hsa-miR-938 0 0 1
chr20:33853937|33854141 hsa-miR-1238-5p 0 0 1
chr20:33853937|33854141 hsa-miR-1238-3p 0 0 1
chr20:33853937|33854141 hsa-miR-1291 0 0 1
chr20:33853937|33854141 hsa-miR-1305 0 0 1
chr20:33853937|33854141 hsa-miR-146b-3p 0 1 1
chr20:33853937|33854141 hsa-miR-525-5p 0 0 1
chr20:33853937|33854141 hsa-miR-502-5p 0 0 1
chr20:33853937|33854141 hsa-miR-331-3p 0 0 1
chr20:33853937|33854141 hsa-miR-520a-5p 0 0 1
chr20:33853937|33854141 hsa-miR-483-3p 1 1 1
chr20:33853937|33854141 hsa-miR-193a-3p 0 0 1
chr20:33853937|33854141 hsa-miR-484 1 0 0
chr20:33853937|33854141 hsa-miR-661 1 0 0
chr20:33853937|33854141 hsa-miR-4284 1 0 0
chr20:33853937|33854141 hsa-miR-3909 1 0 0
chr20:33853937|33854141 hsa-miR-12116 0 1 0
chr20:33853937|33854141 hsa-miR-6749-3p 1 0 0
chr20:33853937|33854141 hsa-miR-149-5p 1 1 0
chr20:33853937|33854141 hsa-miR-6892-3p 1 0 0
chr20:33853937|33854141 hsa-miR-219a-1-3p 1 0 0
chr20:33853937|33854141 hsa-miR-7110-3p 1 0 0
chr20:33853937|33854141 hsa-miR-1915-5p 0 1 0
chr20:33853937|33854141 hsa-miR-6845-3p 1 0 0
chr20:33853937|33854141 hsa-miR-877-3p 1 0 0
chr20:33853937|33854141 hsa-miR-6765-3p 1 0 0
chr20:33853937|33854141 hsa-miR-6735-3p 1 0 0
chr20:33853937|33854141 hsa-miR-6884-3p 0 1 0
chr20:33853937|33854141 hsa-miR-6772-3p 1 0 0
chr20:33853937|33854141 hsa-miR-6803-3p 1 0 0
chr20:33853937|33854141 hsa-miR-4640-3p 0 1 0
chr20:33853937|33854141 hsa-miR-3190-5p 1 0 0
chr20:33853937|33854141 hsa-miR-6870-3p 0 1 0
chr20:33853937|33854141 hsa-miR-4776-3p 0 1 0
chr20:33853937|33854141 hsa-miR-1236-3p 1 0 0
chr20:33853937|33854141 hsa-miR-6811-3p 0 1 0
chr20:33853937|33854141 hsa-miR-6813-3p 1 0 0
chr20:33853937|33854141 hsa-miR-6868-5p 0 1 0
chr20:33853937|33854141 hsa-miR-1914-5p 1 0 0
chr20:33853937|33854141 hsa-miR-6777-3p 1 1 0
chr20:33853937|33854141 hsa-miR-6802-3p 0 1 0
chr20:33853937|33854141 hsa-miR-3124-3p 1 0 0
chr20:33853937|33854141 hsa-miR-6851-3p 1 0 0
chr20:33853937|33854141 hsa-miR-4750-3p 1 0 0
chr20:33853937|33854141 hsa-miR-4433b-5p 1 0 0
chr20:33853937|33854141 hsa-miR-6515-3p 1 0 0
chr20:33853937|33854141 hsa-miR-4685-3p 0 1 0
chr20:33853937|33854141 hsa-miR-4755-5p 1 0 0
chr20:33853937|33854141 hsa-miR-10398-5p 1 0 0
chr20:33853937|33854141 hsa-miR-6784-3p 0 1 0
chr20:33853937|33854141 hsa-miR-6792-3p 1 0 0
chr20:33853937|33854141 hsa-miR-6862-3p 0 1 0
chr20:33853937|33854141 hsa-miR-6775-3p 1 1 0
chr20:33853937|33854141 hsa-miR-4723-3p 1 0 0
chr20:33853937|33854141 hsa-miR-4691-5p 1 1 0
chr20:33853937|33854141 hsa-miR-6824-3p 1 0 0
chr20:33853937|33854141 hsa-miR-7155-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr20:33853937|33854141
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MDRNTALEEIKIRCIITAKGKEKPMAFEK
Nucleotide Sequence ATGGACAGAAACACAGCTCTGGAGGAAATCAAAATCAGATGCATTATTACAGCTAAGGGCAAGGAAAAGCCTATGGCTTTTGAAAAATGA

CircID chr20:33853937|33854141
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence MPHISLCTCTVLAEKSFFKSHRLFLALSCNNASDFDFLQSCVSVHHLCIGPVFTTLAHSSPPCSP
Nucleotide Sequence TTGCCGCACATCTCTTTGTGTACTTGTACGGTACTGGCAGAAAAGTCATTTTTCAAAAGCCATAGGCTTTTCCTTGCCCTTAGCTGTAATAATGCATCTGATTTTGATTTCCTCCAGAGCTGTGTTTCTGTCCATCACCTGTGTATTGGCCCTGTGTTTACCACTCTGGCCCACTCCTCACCCCCTTGCTCCCCT

CircID chr20:33853937|33854141
ORF Type ORF3
Protein Length 67
Nucleotide Length 201
Protein Sequence MTCRTSLCVLVRYWQKSHFSKAIGFSLPLAVIMHLILISSRAVFLSITCVLALCLPLWPTPHPLAPL
Nucleotide Sequence TTGACTTGCCGCACATCTCTTTGTGTACTTGTACGGTACTGGCAGAAAAGTCATTTTTCAAAAGCCATAGGCTTTTCCTTGCCCTTAGCTGTAATAATGCATCTGATTTTGATTTCCTCCAGAGCTGTGTTTCTGTCCATCACCTGTGTATTGGCCCTGTGTTTACCACTCTGGCCCACTCCTCACCCCCTTGCTCCCCTG

CircID chr20:33853937|33854141
ORF Type ORF4
Protein Length 25
Nucleotide Length 75
Protein Sequence MCFCPSPVYWPCVYHSGPLLTPLLP
Nucleotide Sequence CTGTGTTTCTGTCCATCACCTGTGTATTGGCCCTGTGTTTACCACTCTGGCCCACTCCTCACCCCCTTGCTCCCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites