CircRNA Information

General Information
circRNA Basic Information
CircID chr20:34076737|34077051
Strand +
CircType exon
Host Gene ENSG00000125970.10;
Algorism CIRI2;
Sequence CTCCATCACCCTTCTTCTTGCCATCTTGAGGGGAAGGGGTGGAGGAGGGGAGAATAAAACTCAGCCTGGGGTAGCTGTCTAGGGCAGCACCTTAGCGGAAGCTGGCCTCAGCATGGTGAGTGCAGGTGGTCCAGGATCTGCAGGGCCACCCTAGCTCCTCTCTCCCATGTACTATTTCCCCATGCTCTGCCCTGTGCCCTGGTCATGGAGGTGGGTGAGAATCCTCAGAGGCTGACCTGGATTGGCCTTTTGCTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAGGGCATCGATATTGGACTTGATCTGTGTCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:34076737|34077051 hsa-miR-18a-5p 0 0 1
chr20:34076737|34077051 hsa-miR-18a-3p 0 0 1
chr20:34076737|34077051 hsa-miR-31-5p 0 0 1
chr20:34076737|34077051 hsa-miR-31-3p 0 0 1
chr20:34076737|34077051 hsa-miR-185-5p 0 0 1
chr20:34076737|34077051 hsa-miR-185-3p 0 0 1
chr20:34076737|34077051 hsa-miR-370-5p 0 0 1
chr20:34076737|34077051 hsa-miR-370-3p 0 0 1
chr20:34076737|34077051 hsa-miR-328-5p 0 0 1
chr20:34076737|34077051 hsa-miR-328-3p 0 0 1
chr20:34076737|34077051 hsa-miR-18b-5p 0 0 1
chr20:34076737|34077051 hsa-miR-18b-3p 0 0 1
chr20:34076737|34077051 hsa-miR-432-5p 0 0 1
chr20:34076737|34077051 hsa-miR-432-3p 0 0 1
chr20:34076737|34077051 hsa-miR-572 0 0 1
chr20:34076737|34077051 hsa-miR-639 0 1 1
chr20:34076737|34077051 hsa-miR-658 0 0 1
chr20:34076737|34077051 hsa-miR-874-5p 0 0 1
chr20:34076737|34077051 hsa-miR-874-3p 0 0 1
chr20:34076737|34077051 hsa-miR-708-5p 0 0 1
chr20:34076737|34077051 hsa-miR-708-3p 0 0 1
chr20:34076737|34077051 hsa-miR-1229-5p 0 0 1
chr20:34076737|34077051 hsa-miR-1229-3p 0 0 1
chr20:34076737|34077051 hsa-miR-663b 1 1 1
chr20:34076737|34077051 hsa-miR-1291 0 0 1
chr20:34076737|34077051 hsa-miR-548p 0 0 1
chr20:34076737|34077051 hsa-miR-146b-3p 0 0 1
chr20:34076737|34077051 hsa-miR-1224-3p 0 1 1
chr20:34076737|34077051 hsa-miR-28-5p 0 0 1
chr20:34076737|34077051 hsa-miR-220c 0 0 1
chr20:34076737|34077051 hsa-miR-1185 0 0 1
chr20:34076737|34077051 hsa-miR-484 1 0 0
chr20:34076737|34077051 hsa-miR-638 1 0 0
chr20:34076737|34077051 hsa-miR-3132 1 0 0
chr20:34076737|34077051 hsa-miR-3141 1 0 0
chr20:34076737|34077051 hsa-miR-4305 0 1 0
chr20:34076737|34077051 hsa-miR-3921 0 1 0
chr20:34076737|34077051 hsa-miR-3945 1 0 0
chr20:34076737|34077051 hsa-miR-4437 1 0 0
chr20:34076737|34077051 hsa-miR-4462 1 0 0
chr20:34076737|34077051 hsa-miR-4663 0 1 0
chr20:34076737|34077051 hsa-miR-4688 1 0 0
chr20:34076737|34077051 hsa-miR-4739 1 0 0
chr20:34076737|34077051 hsa-miR-5090 1 1 0
chr20:34076737|34077051 hsa-miR-5193 0 1 0
chr20:34076737|34077051 hsa-miR-6081 1 0 0
chr20:34076737|34077051 hsa-miR-6090 1 0 0
chr20:34076737|34077051 hsa-miR-6133 0 1 0
chr20:34076737|34077051 hsa-miR-6860 1 0 0
chr20:34076737|34077051 hsa-miR-8077 0 1 0
chr20:34076737|34077051 hsa-miR-8085 0 1 0
chr20:34076737|34077051 hsa-miR-8089 1 0 0
chr20:34076737|34077051 hsa-miR-150-3p 1 0 0
chr20:34076737|34077051 hsa-miR-93-3p 0 1 0
chr20:34076737|34077051 hsa-miR-4726-3p 1 0 0
chr20:34076737|34077051 hsa-miR-6510-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6820-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6727-5p 1 0 0
chr20:34076737|34077051 hsa-miR-4655-5p 1 0 0
chr20:34076737|34077051 hsa-miR-197-5p 1 0 0
chr20:34076737|34077051 hsa-miR-4728-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6768-5p 1 0 0
chr20:34076737|34077051 hsa-miR-877-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6798-5p 1 0 0
chr20:34076737|34077051 hsa-miR-5006-5p 1 0 0
chr20:34076737|34077051 hsa-miR-1343-3p 0 1 0
chr20:34076737|34077051 hsa-miR-5088-5p 1 0 0
chr20:34076737|34077051 hsa-miR-1226-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6763-3p 1 0 0
chr20:34076737|34077051 hsa-miR-6784-5p 1 0 0
chr20:34076737|34077051 hsa-miR-4640-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6753-5p 1 1 0
chr20:34076737|34077051 hsa-miR-3127-5p 1 0 0
chr20:34076737|34077051 hsa-miR-7161-3p 0 1 0
chr20:34076737|34077051 hsa-miR-7111-3p 0 1 0
chr20:34076737|34077051 hsa-miR-4667-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6739-3p 0 1 0
chr20:34076737|34077051 hsa-miR-3690 0 1 0
chr20:34076737|34077051 hsa-miR-149-3p 1 0 0
chr20:34076737|34077051 hsa-miR-629-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6887-3p 0 1 0
chr20:34076737|34077051 hsa-miR-744-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6826-3p 0 1 0
chr20:34076737|34077051 hsa-miR-4649-3p 0 1 0
chr20:34076737|34077051 hsa-miR-3173-5p 0 1 0
chr20:34076737|34077051 hsa-miR-3157-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6841-5p 1 0 0
chr20:34076737|34077051 hsa-miR-1207-5p 1 0 0
chr20:34076737|34077051 hsa-miR-4763-3p 1 0 0
chr20:34076737|34077051 hsa-miR-6812-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6865-5p 0 1 0
chr20:34076737|34077051 hsa-miR-6775-5p 1 1 0
chr20:34076737|34077051 hsa-miR-6726-5p 1 1 0
chr20:34076737|34077051 hsa-miR-6737-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6756-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6803-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6813-5p 1 0 0
chr20:34076737|34077051 hsa-miR-1249-5p 1 1 0
chr20:34076737|34077051 hsa-miR-6763-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6788-5p 0 1 0
chr20:34076737|34077051 hsa-miR-6879-5p 1 1 0
chr20:34076737|34077051 hsa-miR-1915-3p 1 0 0
chr20:34076737|34077051 hsa-miR-5189-5p 1 0 0
chr20:34076737|34077051 hsa-miR-6780b-5p 1 0 0
chr20:34076737|34077051 hsa-miR-4632-5p 1 1 0
chr20:34076737|34077051 hsa-miR-4649-5p 1 0 0
chr20:34076737|34077051 hsa-miR-4685-5p 1 1 0
chr20:34076737|34077051 hsa-miR-6735-5p 1 1 0
chr20:34076737|34077051 hsa-miR-6831-5p 1 0 0
chr20:34076737|34077051 hsa-miR-939-5p 1 0 0
chr20:34076737|34077051 hsa-miR-1266-5p 1 0 0
chr20:34076737|34077051 hsa-miR-4633-3p 0 1 0
chr20:34076737|34077051 hsa-miR-30c-1-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6731-5p 0 1 0
chr20:34076737|34077051 hsa-miR-6758-5p 0 1 0
chr20:34076737|34077051 hsa-miR-6856-5p 1 1 0
chr20:34076737|34077051 hsa-miR-6799-3p 0 1 0
chr20:34076737|34077051 hsa-miR-7843-5p 0 1 0
chr20:34076737|34077051 hsa-miR-4716-3p 1 0 0
chr20:34076737|34077051 hsa-miR-6756-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6784-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6792-3p 0 1 0
chr20:34076737|34077051 hsa-miR-6862-3p 1 1 0
chr20:34076737|34077051 hsa-miR-6837-5p 1 1 0
chr20:34076737|34077051 hsa-miR-6819-3p 0 1 0
chr20:34076737|34077051 hsa-miR-10394-5p 0 1 0
chr20:34076737|34077051 hsa-miR-16-2-3p 0 1 0
chr20:34076737|34077051 hsa-miR-520e-5p 0 1 0
chr20:34076737|34077051 hsa-miR-195-3p 0 1 0
chr20:34076737|34077051 hsa-miR-4735-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:34076737|34077051
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MPCALVMEVGENPQRLTWIGLLLRSDLLQAAQQGIDIGLDLCQ
Nucleotide Sequence CTGCCCTGTGCCCTGGTCATGGAGGTGGGTGAGAATCCTCAGAGGCTGACCTGGATTGGCCTTTTGCTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAGGGCATCGATATTGGACTTGATCTGTGTCAG
CircID chr20:34076737|34077051
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MQGHPSSSLPCTISPCSALCPGHGGG
Nucleotide Sequence CTGCAGGGCCACCCTAGCTCCTCTCTCCCATGTACTATTTCCCCATGCTCTGCCCTGTGCCCTGGTCATGGAGGTGGGTGA
CircID chr20:34076737|34077051
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence LTQIKSNIDALLSRLEQIAAEQKANPGQPLRILTHLHDQGTGQSMGK
Nucleotide Sequence CTGACACAGATCAAGTCCAATATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGGTCAGCCTCTGAGGATTCTCACCCACCTCCATGACCAGGGCACAGGGCAGAGCATGGGGAAATAG
CircID chr20:34076737|34077051
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MTRAQGRAWGNSTWERGARVALQILDHLHSPC
Nucleotide Sequence ATGACCAGGGCACAGGGCAGAGCATGGGGAAATAGTACATGGGAGAGAGGAGCTAGGGTGGCCCTGCAGATCCTGGACCACCTGCACTCACCATGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab