CircNet

General Information

circRNA Basic Information

CircID	chr20:34291419\|34292376
Strand	-
CircType	exon
Host Gene	ENSG00000101444.11;
Algorism	CIRI2;
Sequence	CTTGGTGACGGAGTCATTGACATTGATGGCAGGCACCTTGAGGATCCCATTGGCCATCATCTTGTAGAGGTTGTGGACCCCAGTCGTGGTCTCCTCAGAGATGCCTCGGATGCCTGGCAGAAGCTGCGGGTA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:34291419\|34292376	hsa-miR-18a-5p	0	0	1
chr20:34291419\|34292376	hsa-miR-18a-3p	0	0	1
chr20:34291419\|34292376	hsa-miR-18b-5p	0	0	1
chr20:34291419\|34292376	hsa-miR-18b-3p	0	0	1
chr20:34291419\|34292376	hsa-miR-638	0	0	1
chr20:34291419\|34292376	hsa-miR-615-5p	1	1	1
chr20:34291419\|34292376	hsa-miR-1283	0	0	1
chr20:34291419\|34292376	hsa-miR-769-3p	0	1	1
chr20:34291419\|34292376	hsa-miR-450b-3p	0	0	1
chr20:34291419\|34292376	hsa-miR-550	0	0	1
chr20:34291419\|34292376	hsa-miR-3921	0	1	0
chr20:34291419\|34292376	hsa-miR-4689	0	1	0
chr20:34291419\|34292376	hsa-miR-4784	0	1	0
chr20:34291419\|34292376	hsa-miR-12119	0	1	0
chr20:34291419\|34292376	hsa-miR-7155-5p	0	1	0
chr20:34291419\|34292376	hsa-miR-6747-3p	1	0	0
chr20:34291419\|34292376	hsa-miR-4786-5p	0	1	0
chr20:34291419\|34292376	hsa-miR-4755-3p	0	1	0
chr20:34291419\|34292376	hsa-miR-4697-3p	0	1	0
chr20:34291419\|34292376	hsa-miR-3150b-3p	0	1	0
chr20:34291419\|34292376	hsa-miR-6738-3p	0	1	0
chr20:34291419\|34292376	hsa-miR-4727-5p	0	1	0
chr20:34291419\|34292376	hsa-miR-6775-5p	1	0	0
chr20:34291419\|34292376	hsa-miR-6858-5p	0	1	0
chr20:34291419\|34292376	hsa-miR-1271-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:34291419\|34292376
ORF Type	ORF1
Protein Length	40
Nucleotide Length	120
Protein Sequence	MPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTK
Nucleotide Sequence	CTGCCAGGCATCCGAGGCATCTCTGAGGAGACCACGACTGGGGTCCACAACCTCTACAAGATGATGGCCAATGGGATCCTCAAGGTGCCTGCCATCAATGTCAATGACTCCGTCACCAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information