CircNet

General Information

circRNA Basic Information

CircID	chr20:34438474\|34440344
Strand	+
CircType	exon
Host Gene	ENSG00000283472.1;ENSG00000078747.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGTGAGCACAAATGGATCAGATGACCCTGAAGATGCAGGAGCTGGTGAAAATAGGAGAGTCAGTGGGAATAATTCTCCATCACTCTCAAATGGTGGTTTTAAACCTTCTAGACCTCCAAGACCTTCACGACCACCACCACCCACCCCACGTAGACCAGCATCTGTCAATGGTTCACCATCTGCCACTTCTGAAAGTGATGGGTCTAGTACAGGCTCTCTGCCGCCGACAAATACAAATACAAATACATCTGAAGGAGCAACATCTGGATTAATAATTCCTCTTACTATATCTGGAGGCTCAGGCCCTAGGCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACCTGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:34438474\|34440344
ORF Type	ORF1
Protein Length	87
Nucleotide Length	261
Protein Sequence	MDQMTLKMQELVKIGESVGIILHHSQMVVLNLLDLQDLHDHHHPPHVDQHLSMVHHLPLLKVMGLVQALCRRQIQIQIHLKEQHLD*
Nucleotide Sequence	ATGGATCAGATGACCCTGAAGATGCAGGAGCTGGTGAAAATAGGAGAGTCAGTGGGAATAATTCTCCATCACTCTCAAATGGTGGTTTTAAACCTTCTAGACCTCCAAGACCTTCACGACCACCACCACCCACCCCACGTAGACCAGCATCTGTCAATGGTTCACCATCTGCCACTTCTGAAAGTGATGGGTCTAGTACAGGCTCTCTGCCGCCGACAAATACAAATACAAATACATCTGAAGGAGCAACATCTGGATTAA

CircID	chr20:34438474\|34440344
ORF Type	ORF2
Protein Length	115
Nucleotide Length	345
Protein Sequence	VSTNGSDDPEDAGAGENRRVSGNNSPSLSNGGFKPSRPPRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLIIPLTISGGSGPRPLNPVTQAPLPP
Nucleotide Sequence	GTGAGCACAAATGGATCAGATGACCCTGAAGATGCAGGAGCTGGTGAAAATAGGAGAGTCAGTGGGAATAATTCTCCATCACTCTCAAATGGTGGTTTTAAACCTTCTAGACCTCCAAGACCTTCACGACCACCACCACCCACCCCACGTAGACCAGCATCTGTCAATGGTTCACCATCTGCCACTTCTGAAAGTGATGGGTCTAGTACAGGCTCTCTGCCGCCGACAAATACAAATACAAATACATCTGAAGGAGCAACATCTGGATTAATAATTCCTCTTACTATATCTGGAGGCTCAGGCCCTAGGCCATTAAATCCTGTAACTCAAGCTCCCTTGCCACCT

CircID	chr20:34438474\|34440344
ORF Type	ORF3
Protein Length	62
Nucleotide Length	186
Protein Sequence	VADGEPLTDAGLRGVGGGGREGLGGLEGLKPPFESDGELFPLTLLFSPAPASSGSSDPFVLT
Nucleotide Sequence	GTGGCAGATGGTGAACCATTGACAGATGCTGGTCTACGTGGGGTGGGTGGTGGTGGTCGTGAAGGTCTTGGAGGTCTAGAAGGTTTAAAACCACCATTTGAGAGTGATGGAGAATTATTCCCACTGACTCTCCTATTTTCACCAGCTCCTGCATCTTCAGGGTCATCTGATCCATTTGTGCTCACT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr20:34438474\|34440344	NOP56	1	2	0
chr20:34438474\|34440344	ELAVL1	0	3	0
chr20:34438474\|34440344	SF3B4	2	0	0
chr20:34438474\|34440344	TAF15	1	0	0
chr20:34438474\|34440344	FMR1	0	0	1
chr20:34438474\|34440344	DGCR8	0	0	1
chr20:34438474\|34440344	SRSF7	0	0	1
chr20:34438474\|34440344	SRSF1	1	0	2
chr20:34438474\|34440344	NOP58	2	1	5
chr20:34438474\|34440344	U2AF1	4	0	4
chr20:34438474\|34440344	U2AF2	14	6	8
chr20:34438474\|34440344	DDX54	1	0	8
chr20:34438474\|34440344	RBM10	3	1	0
chr20:34438474\|34440344	HNRNPC	1	2	0
chr20:34438474\|34440344	YWHAG	1	0	0
chr20:34438474\|34440344	SMNDC1	1	0	0
chr20:34438474\|34440344	MSI1	1	0	0
chr20:34438474\|34440344	ACIN1	1	0	5
chr20:34438474\|34440344	LIN28B	2	0	2
chr20:34438474\|34440344	FXR2	0	2	0
chr20:34438474\|34440344	IGF2BP1	0	0	2
chr20:34438474\|34440344	IGF2BP3	0	0	1
chr20:34438474\|34440344	IGF2BP2	1	4	8
chr20:34438474\|34440344	TARDBP	1	0	0
chr20:34438474\|34440344	YTHDC1	0	0	1
chr20:34438474\|34440344	BUD13	1	0	2
chr20:34438474\|34440344	RBFOX2	1	0	0
chr20:34438474\|34440344	RBM47	0	1	2
chr20:34438474\|34440344	EIF4G2	0	0	2
chr20:34438474\|34440344	CSTF2T	0	0	2
chr20:34438474\|34440344	TARBP2	1	0	0
chr20:34438474\|34440344	RBM22	0	1	0
chr20:34438474\|34440344	XRN2	0	0	1
chr20:34438474\|34440344	HNRNPK	1	0	0
chr20:34438474\|34440344	AGO2	0	0	2
chr20:34438474\|34440344	EWSR1	0	0	1
chr20:34438474\|34440344	EIF4A3	4	2	4
chr20:34438474\|34440344	FBL	1	1	4

CircRNA Information