CircNet

General Information

circRNA Basic Information

CircID	chr20:34470048\|34481206
Strand	+
CircType	exon
Host Gene	ENSG00000283472.1;ENSG00000078747.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGACAATGGACCTCAGATAGCCTATGTTCGGGACTTCAAAGCAAAGGTTCAGTATTTCCGGTTCTGGTGTCAGGCTATTTTAATGATGAGAGTTGACTTAAGTCATTCTTCTATTTCAGCAACTGGCCATGCCACAGCACATAAAGATTACAGTGACAAGAAAAACATTGTTTGAGGATTCCTTTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGTTTGTGGGTGATTTTTCCAGGAGAAGAAGGTTTAGATTATGGAGGTGTAGCAAGGTAGTGATAATATGAATACTCAGAACTTAGTTCCTTTCCTCCAAAGAGAATGGTTCTTTCTTTTGTCACATGAAGTGTTGAACCCAATGTATTGCCTGTTTGAATATGCAGGGAAGGATAACTACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTTCGTTTTATTGGCAGATTTATTGCCATGGCTCTGTTCCATGGGAAATTCATAGACACGGGTTTTTCTTTACCATTCTATAAGCGTATCTTGAACAAACCAGTTGGACTCAAGGATTTAGAATCTATTGATCCAGAATTTTACAATTCTCTCATCTGGGTTAAGGAAAACAATATTGAGGAATGTGATTTGGAAATGTACTTCTCCGTTGACAAAGAAATTCTAGGTGAAATTAAGAGTCATGATCTGAAACCTAATGGTGGCAATATTCTTGTAACAGAAGAAAATAAAGAGGAATACATCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:34470048\|34481206	hsa-miR-187-3p	0	1	1
chr20:34470048\|34481206	hsa-miR-29b-2-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:34470048\|34481206
ORF Type	ORF1
Protein Length	156
Nucleotide Length	468
Protein Sequence	MNTQNLVPFLQREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYI
Nucleotide Sequence	ATGAATACTCAGAACTTAGTTCCTTTCCTCCAAAGAGAATGGTTCTTTCTTTTGTCACATGAAGTGTTGAACCCAATGTATTGCCTGTTTGAATATGCAGGGAAGGATAACTACTGCTTGCAGATAAACCCCGCTTCTTACATCAATCCAGATCACCTGAAATATTTTCGTTTTATTGGCAGATTTATTGCCATGGCTCTGTTCCATGGGAAATTCATAGACACGGGTTTTTCTTTACCATTCTATAAGCGTATCTTGAACAAACCAGTTGGACTCAAGGATTTAGAATCTATTGATCCAGAATTTTACAATTCTCTCATCTGGGTTAAGGAAAACAATATTGAGGAATGTGATTTGGAAATGTACTTCTCCGTTGACAAAGAAATTCTAGGTGAAATTAAGAGTCATGATCTGAAACCTAATGGTGGCAATATTCTTGTAACAGAAGAAAATAAAGAGGAATACATC

CircID	chr20:34470048\|34481206
ORF Type	ORF2
Protein Length	52
Nucleotide Length	156
Protein Sequence	MPQHIKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAR*
Nucleotide Sequence	ATGCCACAGCACATAAAGATTACAGTGACAAGAAAAACATTGTTTGAGGATTCCTTTCAACAGATAATGAGCTTCAGTCCCCAAGATCTGCGAAGACGTTTGTGGGTGATTTTTCCAGGAGAAGAAGGTTTAGATTATGGAGGTGTAGCAAGGTAG

CircID	chr20:34470048\|34481206
ORF Type	ORF3
Protein Length	51
Nucleotide Length	153
Protein Sequence	MEQSHGNKSANKTKIFQVIWIDVRSGVYLQAVVILPCIFKQAIHWVQHFM*
Nucleotide Sequence	ATGGAACAGAGCCATGGCAATAAATCTGCCAATAAAACGAAAATATTTCAGGTGATCTGGATTGATGTAAGAAGCGGGGTTTATCTGCAAGCAGTAGTTATCCTTCCCTGCATATTCAAACAGGCAATACATTGGGTTCAACACTTCATGTGA

CircID	chr20:34470048\|34481206
ORF Type	ORF4
Protein Length	31
Nucleotide Length	93
Protein Sequence	MMRVDLSHSSISATGHATAHKDYSDKKNIV*
Nucleotide Sequence	ATGATGAGAGTTGACTTAAGTCATTCTTCTATTTCAGCAACTGGCCATGCCACAGCACATAAAGATTACAGTGACAAGAAAAACATTGTTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr20:34470048\|34481206	NOP56	1	1	0
chr20:34470048\|34481206	ELAVL1	4	3	1
chr20:34470048\|34481206	SF3B4	1	0	2
chr20:34470048\|34481206	CELF2	0	0	1
chr20:34470048\|34481206	RC3H1	0	0	1
chr20:34470048\|34481206	PRPF8	0	3	0
chr20:34470048\|34481206	UPF1	1	0	1
chr20:34470048\|34481206	TAF15	0	1	0
chr20:34470048\|34481206	FMR1	1	0	2
chr20:34470048\|34481206	SRSF1	0	0	2
chr20:34470048\|34481206	NOP58	1	2	2
chr20:34470048\|34481206	U2AF1	1	0	0
chr20:34470048\|34481206	U2AF2	13	4	4
chr20:34470048\|34481206	DDX54	0	0	8
chr20:34470048\|34481206	RBM10	1	0	0
chr20:34470048\|34481206	HNRNPL	4	1	0
chr20:34470048\|34481206	HNRNPA2B1	0	1	0
chr20:34470048\|34481206	SF3A3	1	0	2
chr20:34470048\|34481206	PTBP1	1	3	0
chr20:34470048\|34481206	HNRNPC	3	0	0
chr20:34470048\|34481206	TRA2A	0	0	1
chr20:34470048\|34481206	HNRNPM	0	1	0
chr20:34470048\|34481206	DHX9	2	1	1
chr20:34470048\|34481206	SMNDC1	0	0	3
chr20:34470048\|34481206	ACIN1	0	3	8
chr20:34470048\|34481206	LIN28A	1	0	0
chr20:34470048\|34481206	FXR2	1	0	1
chr20:34470048\|34481206	IGF2BP1	0	0	6
chr20:34470048\|34481206	IGF2BP3	0	0	4
chr20:34470048\|34481206	IGF2BP2	4	3	6
chr20:34470048\|34481206	TARDBP	0	2	0
chr20:34470048\|34481206	BUD13	0	1	1
chr20:34470048\|34481206	RBM47	0	1	2
chr20:34470048\|34481206	CSTF2T	0	0	1
chr20:34470048\|34481206	TARBP2	1	0	0
chr20:34470048\|34481206	RBM22	0	2	0
chr20:34470048\|34481206	TIAL1	0	1	0
chr20:34470048\|34481206	HNRNPK	0	1	0
chr20:34470048\|34481206	AGO2	1	1	6
chr20:34470048\|34481206	EIF4A3	2	1	11
chr20:34470048\|34481206	FBL	0	1	4

CircRNA Information