CircRNA Information

General Information
circRNA Basic Information
CircID chr20:34998355|34998629
Strand +
CircType exon
Host Gene ENSG00000078814.14;
Algorism CIRI2;
Sequence CTTGCTTTCCTCCTCTAGCTGGCGCCGCAACTCTTCCAGGCTTTGGGCGGCCAGGGCCTTTCCACGGCTCAGCTGACTGATCAGACACTCCTTCTCCTCTAGCAGGCGACTCAGCTCCCCTGCAGGCAAAGAGGCGAGCGGACAGGTCAGGCTGGTGAGGGCTGCACCAAAGCCCTGCCTGGTGTGGCCAGCTGAGCCCCAGCCTCACCGCTTTCCGTCTGTAGTCGCCCACGCTGCGTGCTTGCGTCCGCCAGCTGCCGCTGCAGCTCCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:34998355|34998629 hsa-miR-122-5p 0 0 1
chr20:34998355|34998629 hsa-miR-122-3p 0 0 1
chr20:34998355|34998629 hsa-miR-383-5p 0 0 1
chr20:34998355|34998629 hsa-miR-383-3p 0 0 1
chr20:34998355|34998629 hsa-miR-558 0 0 1
chr20:34998355|34998629 hsa-miR-572 0 0 1
chr20:34998355|34998629 hsa-miR-588 0 1 1
chr20:34998355|34998629 hsa-miR-631 0 0 1
chr20:34998355|34998629 hsa-miR-765 1 1 1
chr20:34998355|34998629 hsa-miR-708-5p 0 0 1
chr20:34998355|34998629 hsa-miR-708-3p 0 0 1
chr20:34998355|34998629 hsa-miR-877-5p 0 0 1
chr20:34998355|34998629 hsa-miR-877-3p 0 0 1
chr20:34998355|34998629 hsa-miR-920 0 1 1
chr20:34998355|34998629 hsa-miR-939-5p 0 0 1
chr20:34998355|34998629 hsa-miR-939-3p 0 0 1
chr20:34998355|34998629 hsa-miR-940 0 1 1
chr20:34998355|34998629 hsa-miR-1226-5p 0 0 1
chr20:34998355|34998629 hsa-miR-1226-3p 0 0 1
chr20:34998355|34998629 hsa-miR-1205 0 0 1
chr20:34998355|34998629 hsa-miR-1291 0 1 1
chr20:34998355|34998629 hsa-miR-1281 0 0 1
chr20:34998355|34998629 hsa-miR-485-5p 0 0 1
chr20:34998355|34998629 hsa-miR-1184 0 1 1
chr20:34998355|34998629 hsa-miR-28-5p 0 0 1
chr20:34998355|34998629 hsa-miR-1207-3p 0 1 1
chr20:34998355|34998629 hsa-miR-1207-5p 0 1 1
chr20:34998355|34998629 hsa-miR-7 0 0 1
chr20:34998355|34998629 hsa-miR-9 0 0 1
chr20:34998355|34998629 hsa-miR-1254 0 0 1
chr20:34998355|34998629 hsa-miR-24 0 0 1
chr20:34998355|34998629 hsa-miR-1231 0 1 0
chr20:34998355|34998629 hsa-miR-1202 1 0 0
chr20:34998355|34998629 hsa-miR-3125 1 0 0
chr20:34998355|34998629 hsa-miR-3139 0 1 0
chr20:34998355|34998629 hsa-miR-4322 1 0 0
chr20:34998355|34998629 hsa-miR-4327 1 0 0
chr20:34998355|34998629 hsa-miR-1268b 1 0 0
chr20:34998355|34998629 hsa-miR-4437 0 1 0
chr20:34998355|34998629 hsa-miR-4467 1 0 0
chr20:34998355|34998629 hsa-miR-4514 0 1 0
chr20:34998355|34998629 hsa-miR-4538 0 1 0
chr20:34998355|34998629 hsa-miR-3960 1 0 0
chr20:34998355|34998629 hsa-miR-3978 0 1 0
chr20:34998355|34998629 hsa-miR-4651 1 0 0
chr20:34998355|34998629 hsa-miR-4663 0 1 0
chr20:34998355|34998629 hsa-miR-4673 0 1 0
chr20:34998355|34998629 hsa-miR-4689 1 0 0
chr20:34998355|34998629 hsa-miR-4767 1 0 0
chr20:34998355|34998629 hsa-miR-4784 1 1 0
chr20:34998355|34998629 hsa-miR-5047 0 1 0
chr20:34998355|34998629 hsa-miR-5787 0 1 0
chr20:34998355|34998629 hsa-miR-6077 0 1 0
chr20:34998355|34998629 hsa-miR-6081 1 0 0
chr20:34998355|34998629 hsa-miR-6125 0 1 0
chr20:34998355|34998629 hsa-miR-6860 0 1 0
chr20:34998355|34998629 hsa-miR-8072 1 0 0
chr20:34998355|34998629 hsa-miR-9901 1 0 0
chr20:34998355|34998629 hsa-miR-6894-5p 1 0 0
chr20:34998355|34998629 hsa-miR-6510-5p 1 0 0
chr20:34998355|34998629 hsa-miR-6089 1 0 0
chr20:34998355|34998629 hsa-miR-1225-3p 1 0 0
chr20:34998355|34998629 hsa-miR-6746-5p 1 0 0
chr20:34998355|34998629 hsa-miR-24-3p 0 1 0
chr20:34998355|34998629 hsa-miR-6849-3p 0 1 0
chr20:34998355|34998629 hsa-miR-6787-3p 0 1 0
chr20:34998355|34998629 hsa-miR-7108-5p 1 0 0
chr20:34998355|34998629 hsa-miR-185-3p 0 1 0
chr20:34998355|34998629 hsa-miR-4733-3p 0 1 0
chr20:34998355|34998629 hsa-miR-6824-5p 1 0 0
chr20:34998355|34998629 hsa-miR-7112-5p 1 1 0
chr20:34998355|34998629 hsa-miR-6499-5p 1 1 0
chr20:34998355|34998629 hsa-miR-4732-3p 0 1 0
chr20:34998355|34998629 hsa-miR-1911-3p 0 1 0
chr20:34998355|34998629 hsa-miR-2277-5p 1 0 0
chr20:34998355|34998629 hsa-miR-4283 0 1 0
chr20:34998355|34998629 hsa-miR-6748-3p 0 1 0
chr20:34998355|34998629 hsa-miR-520g-5p 0 1 0
chr20:34998355|34998629 hsa-miR-3192-3p 0 1 0
chr20:34998355|34998629 hsa-miR-10400-5p 1 0 0
chr20:34998355|34998629 hsa-miR-4763-3p 1 1 0
chr20:34998355|34998629 hsa-miR-6787-5p 1 0 0
chr20:34998355|34998629 hsa-miR-6893-5p 0 1 0
chr20:34998355|34998629 hsa-miR-5001-5p 1 0 0
chr20:34998355|34998629 hsa-miR-6726-5p 1 1 0
chr20:34998355|34998629 hsa-miR-6756-5p 1 0 0
chr20:34998355|34998629 hsa-miR-7107-5p 1 0 0
chr20:34998355|34998629 hsa-miR-10401-5p 1 0 0
chr20:34998355|34998629 hsa-miR-11181-3p 1 1 0
chr20:34998355|34998629 hsa-miR-6808-5p 0 1 0
chr20:34998355|34998629 hsa-miR-6754-3p 0 1 0
chr20:34998355|34998629 hsa-miR-4728-5p 1 0 0
chr20:34998355|34998629 hsa-miR-6836-5p 1 1 0
chr20:34998355|34998629 hsa-miR-4649-5p 1 0 0
chr20:34998355|34998629 hsa-miR-4725-3p 1 0 0
chr20:34998355|34998629 hsa-miR-6729-5p 1 0 0
chr20:34998355|34998629 hsa-miR-6856-5p 1 0 0
chr20:34998355|34998629 hsa-miR-4665-5p 1 0 0
chr20:34998355|34998629 hsa-miR-3116 0 1 0
chr20:34998355|34998629 hsa-miR-6511a-3p 0 1 0
chr20:34998355|34998629 hsa-miR-6775-3p 0 1 0
chr20:34998355|34998629 hsa-miR-6511b-3p 0 1 0
chr20:34998355|34998629 hsa-miR-3619-5p 1 0 0
chr20:34998355|34998629 hsa-miR-6781-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr20:34998355|34998629
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MAPQLFQALGGQGLSTAQLTDQTLLLL
Nucleotide Sequence CTGGCGCCGCAACTCTTCCAGGCTTTGGGCGGCCAGGGCCTTTCCACGGCTCAGCTGACTGATCAGACACTCCTTCTCCTCTAG

CircID chr20:34998355|34998629
ORF Type ORF2
Protein Length 66
Nucleotide Length 198
Protein Sequence MIRHSFSSSRRLSSPAGKEASGQVRLVRAAPKPCLVWPAEPQPHRFPSVVAHAACLRPPAAAAAPP
Nucleotide Sequence CTGATCAGACACTCCTTCTCCTCTAGCAGGCGACTCAGCTCCCCTGCAGGCAAAGAGGCGAGCGGACAGGTCAGGCTGGTGAGGGCTGCACCAAAGCCCTGCCTGGTGTGGCCAGCTGAGCCCCAGCCTCACCGCTTTCCGTCTGTAGTCGCCCACGCTGCGTGCTTGCGTCCGCCAGCTGCCGCTGCAGCTCCTCCA

CircID chr20:34998355|34998629
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MQRQLADASTQRGRLQTESGEAGAQLATPGRALVQPSPA
Nucleotide Sequence CTGCAGCGGCAGCTGGCGGACGCAAGCACGCAGCGTGGGCGACTACAGACGGAAAGCGGTGAGGCTGGGGCTCAGCTGGCCACACCAGGCAGGGCTTTGGTGCAGCCCTCACCAGCCTGA

CircID chr20:34998355|34998629
ORF Type ORF4
Protein Length 67
Nucleotide Length 201
Protein Sequence MGLSWPHQAGLWCSPHQPDLSARLFACRGAESPARGEGVSDQSAEPWKGPGRPKPGRVAAPARGGKQ
Nucleotide Sequence CTGGGGCTCAGCTGGCCACACCAGGCAGGGCTTTGGTGCAGCCCTCACCAGCCTGACCTGTCCGCTCGCCTCTTTGCCTGCAGGGGAGCTGAGTCGCCTGCTAGAGGAGAAGGAGTGTCTGATCAGTCAGCTGAGCCGTGGAAAGGCCCTGGCCGCCCAAAGCCTGGAAGAGTTGCGGCGCCAGCTAGAGGAGGAAAGCAA

CircID chr20:34998355|34998629
ORF Type ORF5
Protein Length 50
Nucleotide Length 150
Protein Sequence MTCPLASLPAGELSRLLEEKECLISQLSRGKALAAQSLEELRRQLEEESK
Nucleotide Sequence CTGACCTGTCCGCTCGCCTCTTTGCCTGCAGGGGAGCTGAGTCGCCTGCTAGAGGAGAAGGAGTGTCTGATCAGTCAGCTGAGCCGTGGAAAGGCCCTGGCCGCCCAAAGCCTGGAAGAGTTGCGGCGCCAGCTAGAGGAGGAAAGCAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites