CircRNA Information

General Information
circRNA Basic Information
CircID chr20:35002953|35003248
Strand +
CircType exon
Host Gene ENSG00000100991.10;
Algorism CIRI2;
Sequence AGTGTCCATCCTGTTGAACCCGGACCGGCAGTCACCCTCTGCTCTCGTTAGCTACATTGAGGAGCCCTACATGGACATAGACAGGGACTTCACTGAGGAGTGACCTTGGGCCAGGCCTCGGGAGGCTGCTGGGCCAGTGTGGGTGAGCGTGGGTACGATGCCACACGCCCTGCCCTGTTCCCGTTCCTCCCTGCTGCTCTCTGCCTGCCCCAGGTCTTTGGGTACAGGCTTGGTGGGAGGGAAGTCCTAGAAGCCCTTGGTCCCCCTGGGTCTGAGGGCCCTAGGTCATGGAGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:35002953|35003248 hsa-miR-15a-5p 0 0 1
chr20:35002953|35003248 hsa-miR-15a-3p 0 0 1
chr20:35002953|35003248 hsa-miR-192-5p 0 0 1
chr20:35002953|35003248 hsa-miR-192-3p 0 0 1
chr20:35002953|35003248 hsa-miR-214-5p 0 0 1
chr20:35002953|35003248 hsa-miR-214-3p 0 0 1
chr20:35002953|35003248 hsa-miR-215-5p 0 0 1
chr20:35002953|35003248 hsa-miR-215-3p 0 0 1
chr20:35002953|35003248 hsa-miR-15b-5p 0 0 1
chr20:35002953|35003248 hsa-miR-15b-3p 0 0 1
chr20:35002953|35003248 hsa-miR-126-5p 0 0 1
chr20:35002953|35003248 hsa-miR-126-3p 0 0 1
chr20:35002953|35003248 hsa-miR-134-5p 0 0 1
chr20:35002953|35003248 hsa-miR-134-3p 0 0 1
chr20:35002953|35003248 hsa-miR-136-5p 0 0 1
chr20:35002953|35003248 hsa-miR-136-3p 0 0 1
chr20:35002953|35003248 hsa-miR-195-5p 0 0 1
chr20:35002953|35003248 hsa-miR-195-3p 0 0 1
chr20:35002953|35003248 hsa-miR-424-5p 0 0 1
chr20:35002953|35003248 hsa-miR-424-3p 0 0 1
chr20:35002953|35003248 hsa-miR-193b-5p 0 0 1
chr20:35002953|35003248 hsa-miR-193b-3p 0 0 1
chr20:35002953|35003248 hsa-miR-497-5p 0 0 1
chr20:35002953|35003248 hsa-miR-497-3p 0 0 1
chr20:35002953|35003248 hsa-miR-487b-5p 0 0 1
chr20:35002953|35003248 hsa-miR-487b-3p 0 0 1
chr20:35002953|35003248 hsa-miR-617 0 0 1
chr20:35002953|35003248 hsa-miR-631 0 1 1
chr20:35002953|35003248 hsa-miR-421 0 0 1
chr20:35002953|35003248 hsa-miR-668-5p 0 0 1
chr20:35002953|35003248 hsa-miR-668-3p 0 0 1
chr20:35002953|35003248 hsa-miR-1296-5p 0 0 1
chr20:35002953|35003248 hsa-miR-1296-3p 0 0 1
chr20:35002953|35003248 hsa-miR-1321 0 0 1
chr20:35002953|35003248 hsa-miR-486-5p 0 0 1
chr20:35002953|35003248 hsa-miR-486-3p 0 0 1
chr20:35002953|35003248 hsa-miR-532-3p 0 1 1
chr20:35002953|35003248 hsa-miR-339-5p 1 0 1
chr20:35002953|35003248 hsa-miR-1224-3p 0 0 1
chr20:35002953|35003248 hsa-miR-1207-5p 1 1 1
chr20:35002953|35003248 hsa-miR-483-3p 0 0 1
chr20:35002953|35003248 hsa-miR-574-3p 0 1 1
chr20:35002953|35003248 hsa-miR-193a-3p 0 1 1
chr20:35002953|35003248 hsa-miR-1260 0 0 1
chr20:35002953|35003248 hsa-miR-1274a 0 0 1
chr20:35002953|35003248 hsa-miR-1280 0 0 1
chr20:35002953|35003248 hsa-miR-642 0 0 1
chr20:35002953|35003248 hsa-miR-1274b 0 0 1
chr20:35002953|35003248 hsa-miR-16 0 0 1
chr20:35002953|35003248 hsa-miR-644 0 0 1
chr20:35002953|35003248 hsa-miR-1268 0 0 1
chr20:35002953|35003248 hsa-miR-484 1 0 0
chr20:35002953|35003248 hsa-miR-658 1 0 0
chr20:35002953|35003248 hsa-miR-761 0 1 0
chr20:35002953|35003248 hsa-miR-940 1 0 0
chr20:35002953|35003248 hsa-miR-2278 0 1 0
chr20:35002953|35003248 hsa-miR-4270 1 1 0
chr20:35002953|35003248 hsa-miR-3661 0 1 0
chr20:35002953|35003248 hsa-miR-4421 0 1 0
chr20:35002953|35003248 hsa-miR-4441 0 1 0
chr20:35002953|35003248 hsa-miR-4468 0 1 0
chr20:35002953|35003248 hsa-miR-4642 0 1 0
chr20:35002953|35003248 hsa-miR-4681 0 1 0
chr20:35002953|35003248 hsa-miR-4692 0 1 0
chr20:35002953|35003248 hsa-miR-4706 1 1 0
chr20:35002953|35003248 hsa-miR-4721 1 0 0
chr20:35002953|35003248 hsa-miR-4739 1 1 0
chr20:35002953|35003248 hsa-miR-5787 1 0 0
chr20:35002953|35003248 hsa-miR-6132 1 1 0
chr20:35002953|35003248 hsa-miR-6860 1 0 0
chr20:35002953|35003248 hsa-miR-6749-3p 0 1 0
chr20:35002953|35003248 hsa-miR-149-5p 0 1 0
chr20:35002953|35003248 hsa-miR-7106-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6510-5p 0 1 0
chr20:35002953|35003248 hsa-miR-3692-5p 1 0 0
chr20:35002953|35003248 hsa-miR-766-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6804-5p 1 1 0
chr20:35002953|35003248 hsa-miR-7851-3p 0 1 0
chr20:35002953|35003248 hsa-miR-6746-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6727-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6721-5p 0 1 0
chr20:35002953|35003248 hsa-miR-100-3p 0 1 0
chr20:35002953|35003248 hsa-miR-7845-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6796-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6732-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6798-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6852-5p 0 1 0
chr20:35002953|35003248 hsa-miR-5088-5p 1 0 0
chr20:35002953|35003248 hsa-miR-1226-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6757-3p 0 1 0
chr20:35002953|35003248 hsa-miR-3127-5p 0 1 0
chr20:35002953|35003248 hsa-miR-92b-5p 0 1 0
chr20:35002953|35003248 hsa-miR-4787-5p 1 0 0
chr20:35002953|35003248 hsa-miR-149-3p 1 1 0
chr20:35002953|35003248 hsa-miR-7112-5p 1 0 0
chr20:35002953|35003248 hsa-miR-7160-3p 0 1 0
chr20:35002953|35003248 hsa-miR-135b-3p 0 1 0
chr20:35002953|35003248 hsa-miR-7152-3p 1 0 0
chr20:35002953|35003248 hsa-miR-3158-3p 0 1 0
chr20:35002953|35003248 hsa-miR-744-5p 1 0 0
chr20:35002953|35003248 hsa-miR-3912-5p 0 1 0
chr20:35002953|35003248 hsa-miR-3675-5p 1 0 0
chr20:35002953|35003248 hsa-miR-3144-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6761-3p 0 1 0
chr20:35002953|35003248 hsa-miR-4763-3p 1 1 0
chr20:35002953|35003248 hsa-miR-6726-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6743-5p 1 1 0
chr20:35002953|35003248 hsa-miR-7107-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6722-3p 1 0 0
chr20:35002953|35003248 hsa-miR-6751-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6808-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6879-5p 0 1 0
chr20:35002953|35003248 hsa-miR-1915-3p 0 1 0
chr20:35002953|35003248 hsa-miR-10396a-5p 1 0 0
chr20:35002953|35003248 hsa-miR-4632-5p 1 1 0
chr20:35002953|35003248 hsa-miR-4685-5p 0 1 0
chr20:35002953|35003248 hsa-miR-4749-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6735-5p 1 1 0
chr20:35002953|35003248 hsa-miR-6794-5p 0 1 0
chr20:35002953|35003248 hsa-miR-4436b-3p 0 1 0
chr20:35002953|35003248 hsa-miR-6831-5p 0 1 0
chr20:35002953|35003248 hsa-miR-1910-3p 0 1 0
chr20:35002953|35003248 hsa-miR-6511a-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6856-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6791-5p 1 0 0
chr20:35002953|35003248 hsa-miR-6784-3p 0 1 0
chr20:35002953|35003248 hsa-miR-6862-3p 0 1 0
chr20:35002953|35003248 hsa-miR-10400-3p 1 0 0
chr20:35002953|35003248 hsa-miR-10394-5p 1 0 0
chr20:35002953|35003248 hsa-miR-3619-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6764-5p 0 1 0
chr20:35002953|35003248 hsa-miR-6838-5p 0 1 0
chr20:35002953|35003248 hsa-miR-370-5p 0 1 0
chr20:35002953|35003248 hsa-miR-7155-3p 0 1 0
chr20:35002953|35003248 hsa-miR-5699-3p 0 1 0
chr20:35002953|35003248 hsa-miR-549a-5p 0 1 0
chr20:35002953|35003248 hsa-miR-3136-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr20:35002953|35003248
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence MGQASGGCWASVGERGYDATRPALFPFLPAALCLPQVFGYRLGGREVLEALGPPGSEGPRSWR
Nucleotide Sequence TTGGGCCAGGCCTCGGGAGGCTGCTGGGCCAGTGTGGGTGAGCGTGGGTACGATGCCACACGCCCTGCCCTGTTCCCGTTCCTCCCTGCTGCTCTCTGCCTGCCCCAGGTCTTTGGGTACAGGCTTGGTGGGAGGGAAGTCCTAGAAGCCCTTGGTCCCCCTGGGTCTGAGGGCCCTAGGTCATGGAGA

CircID chr20:35002953|35003248
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MLNPDRQSPSALVSYIEEPYMDIDRDFTEE
Nucleotide Sequence CTGTTGAACCCGGACCGGCAGTCACCCTCTGCTCTCGTTAGCTACATTGAGGAGCCCTACATGGACATAGACAGGGACTTCACTGAGGAGTGA

CircID chr20:35002953|35003248
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MPHALPCSRSSLLLSACPRSLGTGLVGGKS
Nucleotide Sequence ATGCCACACGCCCTGCCCTGTTCCCGTTCCTCCCTGCTGCTCTCTGCCTGCCCCAGGTCTTTGGGTACAGGCTTGGTGGGAGGGAAGTCCTAG

CircID chr20:35002953|35003248
ORF Type ORF4
Protein Length 45
Nucleotide Length 138
Protein Sequence MYPKTWGRQRAAGRNGNRAGRVASYPRSPTLAQQPPEAWPKVTPQ
Nucleotide Sequence CTGTACCCAAAGACCTGGGGCAGGCAGAGAGCAGCAGGGAGGAACGGGAACAGGGCAGGGCGTGTGGCATCGTACCCACGCTCACCCACACTGGCCCAGCAGCCTCCCGAGGCCTGGCCCAAGGTCACTCCTCAGTGA

CircID chr20:35002953|35003248
ORF Type ORF5
Protein Length 48
Nucleotide Length 147
Protein Sequence MGQAESSREEREQGRACGIVPTLTHTGPAASRGLAQGHSSVKSLSMSM
Nucleotide Sequence CTGGGGCAGGCAGAGAGCAGCAGGGAGGAACGGGAACAGGGCAGGGCGTGTGGCATCGTACCCACGCTCACCCACACTGGCCCAGCAGCCTCCCGAGGCCTGGCCCAAGGTCACTCCTCAGTGAAGTCCCTGTCTATGTCCATGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites