CircNet

General Information

circRNA Basic Information

CircID	chr20:35627280\|35630490
Strand	-
CircType	exon
Host Gene	ENSG00000214078.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCATCCAGGGCATTGTGGATGCCTACCGCCAAGCCCTGCCCCAAGTTCGCCTCTATGGCCCTACCAACTTTGCACCCATCATCAACCATGTGGCCAGGTTTGCAGCCCAGGCTGCACATCAGGGGACTGCCTCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:35627280\|35630490	hsa-miR-18a-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:35627280\|35630490
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MCSLGCKPGHMVDDGCKVGRAIEANLGQGLAVGIHNALD
Nucleotide Sequence	ATGTGCAGCCTGGGCTGCAAACCTGGCCACATGGTTGATGATGGGTGCAAAGTTGGTAGGGCCATAGAGGCGAACTTGGGGCAGGGCTTGGCGGTAGGCATCCACAATGCCCTGGAT

CircID	chr20:35627280\|35630490
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MPTAKPCPKFASMALPTLHPSSTMWPGLQPRLHIRGLP
Nucleotide Sequence	ATGCCTACCGCCAAGCCCTGCCCCAAGTTCGCCTCTATGGCCCTACCAACTTTGCACCCATCATCAACCATGTGGCCAGGTTTGCAGCCCAGGCTGCACATCAGGGGACTGCCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr20:35627280\|35630490	NOP56	0	2	0
chr20:35627280\|35630490	MOV10	0	1	0
chr20:35627280\|35630490	ELAVL1	4	10	1
chr20:35627280\|35630490	NCBP3	0	1	0
chr20:35627280\|35630490	SF3B4	3	4	0
chr20:35627280\|35630490	RBM47	0	2	0
chr20:35627280\|35630490	RC3H1	1	0	0
chr20:35627280\|35630490	PRPF8	13	6	0
chr20:35627280\|35630490	YTHDF1	0	2	0
chr20:35627280\|35630490	DDX42	0	1	0
chr20:35627280\|35630490	UPF1	5	11	0
chr20:35627280\|35630490	SRSF10	1	1	0
chr20:35627280\|35630490	TAF15	2	0	0
chr20:35627280\|35630490	CAPRIN1	0	2	0
chr20:35627280\|35630490	FMR1	6	13	0
chr20:35627280\|35630490	CPSF6	0	1	0
chr20:35627280\|35630490	NUDT21	0	2	0
chr20:35627280\|35630490	CPSF4	0	1	0
chr20:35627280\|35630490	RBM15B	0	1	0
chr20:35627280\|35630490	FUS	1	3	0
chr20:35627280\|35630490	GNL3	1	0	0
chr20:35627280\|35630490	DGCR8	3	0	0
chr20:35627280\|35630490	SRSF7	2	1	0
chr20:35627280\|35630490	SRSF1	7	13	0
chr20:35627280\|35630490	NOP58	9	5	1
chr20:35627280\|35630490	CSTF2	0	1	0
chr20:35627280\|35630490	U2AF1	1	7	1
chr20:35627280\|35630490	ADAR	1	0	0
chr20:35627280\|35630490	U2AF2	26	24	1
chr20:35627280\|35630490	SRSF9	6	3	0
chr20:35627280\|35630490	DKC1	0	1	0
chr20:35627280\|35630490	DDX54	8	5	6
chr20:35627280\|35630490	LSM11	0	2	0
chr20:35627280\|35630490	YTHDF2	0	1	0
chr20:35627280\|35630490	RBM10	15	7	0
chr20:35627280\|35630490	PCBP2	0	0	1
chr20:35627280\|35630490	SF3A3	3	2	0
chr20:35627280\|35630490	PTBP1	1	0	0
chr20:35627280\|35630490	HNRNPC	0	6	0
chr20:35627280\|35630490	TRA2A	0	1	0
chr20:35627280\|35630490	ATXN2	0	8	0
chr20:35627280\|35630490	XRN2	0	2	0
chr20:35627280\|35630490	HNRNPA1	0	1	0
chr20:35627280\|35630490	DDX3X	0	7	0
chr20:35627280\|35630490	ZC3H7B	0	4	0
chr20:35627280\|35630490	LARP4B	0	3	1
chr20:35627280\|35630490	SMNDC1	1	4	0
chr20:35627280\|35630490	MSI2	1	0	0
chr20:35627280\|35630490	ACIN1	15	4	1
chr20:35627280\|35630490	LIN28B	1	4	0
chr20:35627280\|35630490	SND1	0	4	0
chr20:35627280\|35630490	IGF2BP1	7	5	3
chr20:35627280\|35630490	DICER1	1	1	0
chr20:35627280\|35630490	IGF2BP3	5	7	4
chr20:35627280\|35630490	IGF2BP2	9	13	4
chr20:35627280\|35630490	NPM1	2	0	0
chr20:35627280\|35630490	FTO	2	0	0
chr20:35627280\|35630490	TARDBP	0	10	0
chr20:35627280\|35630490	BUD13	4	3	1
chr20:35627280\|35630490	RBFOX2	0	5	0
chr20:35627280\|35630490	CNBP	4	5	1
chr20:35627280\|35630490	RTCB	1	2	0
chr20:35627280\|35630490	METTL3	0	1	0
chr20:35627280\|35630490	CSTF2T	1	2	1
chr20:35627280\|35630490	SRRM4	0	1	0
chr20:35627280\|35630490	TIA1	3	3	0
chr20:35627280\|35630490	CPSF7	0	3	0
chr20:35627280\|35630490	RBM22	2	1	0
chr20:35627280\|35630490	TIAL1	3	3	0
chr20:35627280\|35630490	EIF4G2	0	2	0
chr20:35627280\|35630490	HNRNPK	0	1	0
chr20:35627280\|35630490	AGO2	1	15	5
chr20:35627280\|35630490	AGO1	0	1	2
chr20:35627280\|35630490	EIF4A3	15	7	1
chr20:35627280\|35630490	FBL	6	5	1

CircRNA Information