CircRNA Information

General Information
circRNA Basic Information
CircID chr20:35739529|35739644
Strand -
CircType exon
Host Gene ENSG00000131051.19;
Algorism CIRI2;
Sequence CTCTGTCACACATCTCGCCCTGAAGCAAACAGGGATTCACACTGCTTTAGTAATGTTGACTCCCAAGAACCCAAGAAAGTCAATTAATAATCCACCAAGTCCAGCCTAAACATTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:35739529|35739644 hsa-miR-422a 0 0 1
chr20:35739529|35739644 hsa-miR-505-5p 0 0 1
chr20:35739529|35739644 hsa-miR-505-3p 0 0 1
chr20:35739529|35739644 hsa-miR-578 0 0 1
chr20:35739529|35739644 hsa-miR-635 0 0 1
chr20:35739529|35739644 hsa-miR-1257 0 0 1
chr20:35739529|35739644 hsa-miR-339-5p 0 0 1
chr20:35739529|35739644 hsa-miR-576-3p 0 0 1
chr20:35739529|35739644 hsa-miR-542-3p 0 0 1
chr20:35739529|35739644 hsa-miR-1274a 0 0 1
chr20:35739529|35739644 hsa-miR-1274b 0 0 1
chr20:35739529|35739644 hsa-miR-378 0 0 1
chr20:35739529|35739644 hsa-miR-323-3p 0 0 1
chr20:35739529|35739644 hsa-miR-645 1 0 0
chr20:35739529|35739644 hsa-miR-663a 1 0 0
chr20:35739529|35739644 hsa-miR-762 1 0 0
chr20:35739529|35739644 hsa-miR-1231 1 0 0
chr20:35739529|35739644 hsa-miR-1268a 1 0 0
chr20:35739529|35739644 hsa-miR-2278 1 1 0
chr20:35739529|35739644 hsa-miR-2861 1 0 0
chr20:35739529|35739644 hsa-miR-378b 1 1 0
chr20:35739529|35739644 hsa-miR-3165 1 0 0
chr20:35739529|35739644 hsa-miR-378c 1 1 0
chr20:35739529|35739644 hsa-miR-4322 1 0 0
chr20:35739529|35739644 hsa-miR-3652 1 0 0
chr20:35739529|35739644 hsa-miR-3918 1 0 0
chr20:35739529|35739644 hsa-miR-1268b 1 0 0
chr20:35739529|35739644 hsa-miR-378e 1 1 0
chr20:35739529|35739644 hsa-miR-378f 1 1 0
chr20:35739529|35739644 hsa-miR-378g 1 0 0
chr20:35739529|35739644 hsa-miR-4430 1 0 0
chr20:35739529|35739644 hsa-miR-378h 1 1 0
chr20:35739529|35739644 hsa-miR-4478 1 0 0
chr20:35739529|35739644 hsa-miR-4486 1 0 0
chr20:35739529|35739644 hsa-miR-4492 1 0 0
chr20:35739529|35739644 hsa-miR-4498 1 0 0
chr20:35739529|35739644 hsa-miR-4505 1 0 0
chr20:35739529|35739644 hsa-miR-4535 1 0 0
chr20:35739529|35739644 hsa-miR-1587 1 1 0
chr20:35739529|35739644 hsa-miR-4748 1 0 0
chr20:35739529|35739644 hsa-miR-5787 1 0 0
chr20:35739529|35739644 hsa-miR-6086 1 0 0
chr20:35739529|35739644 hsa-miR-378j 1 0 0
chr20:35739529|35739644 hsa-miR-6132 1 0 0
chr20:35739529|35739644 hsa-miR-12128 1 0 0
chr20:35739529|35739644 hsa-miR-1287-5p 1 0 0
chr20:35739529|35739644 hsa-miR-8071 1 0 0
chr20:35739529|35739644 hsa-miR-6727-5p 1 0 0
chr20:35739529|35739644 hsa-miR-659-3p 1 0 0
chr20:35739529|35739644 hsa-miR-6793-5p 1 0 0
chr20:35739529|35739644 hsa-miR-185-3p 1 0 0
chr20:35739529|35739644 hsa-miR-6740-5p 1 0 0
chr20:35739529|35739644 hsa-miR-3127-5p 1 0 0
chr20:35739529|35739644 hsa-miR-1228-5p 1 0 0
chr20:35739529|35739644 hsa-miR-4446-3p 1 0 0
chr20:35739529|35739644 hsa-miR-203a-3p 0 1 0
chr20:35739529|35739644 hsa-miR-6509-5p 1 0 0
chr20:35739529|35739644 hsa-miR-6769b-5p 1 0 0
chr20:35739529|35739644 hsa-miR-5001-5p 1 0 0
chr20:35739529|35739644 hsa-miR-6819-5p 1 0 0
chr20:35739529|35739644 hsa-miR-6774-5p 1 0 0
chr20:35739529|35739644 hsa-miR-3620-5p 1 1 0
chr20:35739529|35739644 hsa-miR-10396b-5p 1 0 0
chr20:35739529|35739644 hsa-miR-4649-5p 0 1 0
chr20:35739529|35739644 hsa-miR-1266-5p 1 0 0
chr20:35739529|35739644 hsa-miR-378a-3p 1 1 0
chr20:35739529|35739644 hsa-miR-378d 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:35739529|35739644
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MKQTGIHTALVMLTPKNPRKSINNPPSPA
Nucleotide Sequence CTGAAGCAAACAGGGATTCACACTGCTTTAGTAATGTTGACTCCCAAGAACCCAAGAAAGTCAATTAATAATCCACCAAGTCCAGCCTAA

CircID chr20:35739529|35739644
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MTFLGSWESTLLKQCESLFASGRDV
Nucleotide Sequence TTGACTTTCTTGGGTTCTTGGGAGTCAACATTACTAAAGCAGTGTGAATCCCTGTTTGCTTCAGGGCGAGATGTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites