CircNet

General Information

circRNA Basic Information

CircID	chr20:35899234\|35899403
Strand	+
CircType	exon
Host Gene	ENSG00000025293.14;
Algorism	CIRI2;
Sequence	CCAAAATCATCTGTTTTCTTAAAAGTATTTGTTACTGAAAAAAATAAAAACAAAAGCAAAGGTTCCTTGTATTTATCCCAGTTATTACAAAACATGCATTAACACATGACAACTGAGGGTGAAAGACTAGCGTGCAAATGTAGCCTGAGACATCAGACTGCCATTACCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:35899234\|35899403	hsa-miR-34a-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-34a-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-221-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-221-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-222-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-222-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-155-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-155-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-381-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-381-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-449a	0	0	1
chr20:35899234\|35899403	hsa-miR-484	0	0	1
chr20:35899234\|35899403	hsa-miR-495-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-495-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-507	0	0	1
chr20:35899234\|35899403	hsa-miR-557	0	0	1
chr20:35899234\|35899403	hsa-miR-569	0	0	1
chr20:35899234\|35899403	hsa-miR-570-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-570-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-622	0	1	1
chr20:35899234\|35899403	hsa-miR-624-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-624-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-449b-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-449b-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-802	0	0	1
chr20:35899234\|35899403	hsa-miR-300	0	0	1
chr20:35899234\|35899403	hsa-miR-1266-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-1266-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-34c-5p	0	0	1
chr20:35899234\|35899403	hsa-miR-582-3p	0	0	1
chr20:35899234\|35899403	hsa-miR-548ai	0	1	0
chr20:35899234\|35899403	hsa-miR-10226	1	0	0
chr20:35899234\|35899403	hsa-miR-6830-3p	0	1	0
chr20:35899234\|35899403	hsa-miR-619-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:35899234\|35899403
ORF Type	ORF1
Protein Length	26
Nucleotide Length	81
Protein Sequence	MLLKKIKTKAKVPCIYPSYYKTCINT
Nucleotide Sequence	TTGTTACTGAAAAAAATAAAAACAAAAGCAAAGGTTCCTTGTATTTATCCCAGTTATTACAAAACATGCATTAACACATGA

CircID	chr20:35899234\|35899403
ORF Type	ORF2
Protein Length	31
Nucleotide Length	93
Protein Sequence	MFCNNWDKYKEPLLLFLFFSVTNTFKKTDDF
Nucleotide Sequence	ATGTTTTGTAATAACTGGGATAAATACAAGGAACCTTTGCTTTTGTTTTTATTTTTTTCAGTAACAAATACTTTTAAGAAAACAGATGATTTT

CircID	chr20:35899234\|35899403
ORF Type	ORF3
Protein Length	26
Nucleotide Length	81
Protein Sequence	MSCVNACFVITGINTRNLCFCFYFFQ
Nucleotide Sequence	TTGTCATGTGTTAATGCATGTTTTGTAATAACTGGGATAAATACAAGGAACCTTTGCTTTTGTTTTTATTTTTTTCAGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information