CircNet

General Information

circRNA Basic Information

CircID	chr20:35913249\|35914197
Strand	+
CircType	exon
Host Gene	ENSG00000025293.16;
Algorism	find_circ;CIRI2;CIRC
Sequence	CTACAAAAGACAAGGAAAAGAATAAAGAGAAGAAATTCAAGGAGTTTGTGAGAGTGAAGCCAAAGAAGAAAAAGAAAAAGAAAAAGAAAACCAAACCTGTGTGCCCTGCTGCAGGATGGTACAGATGAAGGCATCGAAGTGTAAGCAGATGTGCAGAATGCCCCTGCAGTGAGGAGATCAGTGACACCTCCCAGGAACCTTCTCCACCCAAGGCATTTGCTGTTACCAGGTGTGGGTCCTCACACAAGCCAGGGGTCCATATGAGCCCGCAGCTTCATGGCCCAGAATCTGGACACCACAAAGGGAAAGTGAAAGCATTGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:35913249\|35914197	hsa-miR-33a-5p	0	0	1
chr20:35913249\|35914197	hsa-miR-33a-3p	0	0	1
chr20:35913249\|35914197	hsa-miR-186-5p	0	0	1
chr20:35913249\|35914197	hsa-miR-186-3p	0	0	1
chr20:35913249\|35914197	hsa-miR-377-5p	0	0	1
chr20:35913249\|35914197	hsa-miR-377-3p	0	0	1
chr20:35913249\|35914197	hsa-miR-422a	0	0	1
chr20:35913249\|35914197	hsa-miR-583	0	0	1
chr20:35913249\|35914197	hsa-miR-33b-5p	0	0	1
chr20:35913249\|35914197	hsa-miR-33b-3p	0	0	1
chr20:35913249\|35914197	hsa-miR-758-5p	0	0	1
chr20:35913249\|35914197	hsa-miR-758-3p	0	0	1
chr20:35913249\|35914197	hsa-miR-873-5p	0	0	1
chr20:35913249\|35914197	hsa-miR-873-3p	0	0	1
chr20:35913249\|35914197	hsa-miR-1253	0	1	1
chr20:35913249\|35914197	hsa-miR-1276	0	0	1
chr20:35913249\|35914197	hsa-miR-127-5p	0	1	1
chr20:35913249\|35914197	hsa-miR-1225-3p	1	0	1
chr20:35913249\|35914197	hsa-miR-615-5p	0	1	1
chr20:35913249\|35914197	hsa-miR-1283	0	0	1
chr20:35913249\|35914197	hsa-miR-556-5p	0	0	1
chr20:35913249\|35914197	hsa-miR-342-3p	0	0	1
chr20:35913249\|35914197	hsa-miR-515-5p	0	0	1
chr20:35913249\|35914197	hsa-miR-1233	0	0	1
chr20:35913249\|35914197	hsa-miR-378	0	0	1
chr20:35913249\|35914197	hsa-miR-365	0	0	1
chr20:35913249\|35914197	hsa-miR-3131	1	0	0
chr20:35913249\|35914197	hsa-miR-3154	1	0	0
chr20:35913249\|35914197	hsa-miR-4270	1	0	0
chr20:35913249\|35914197	hsa-miR-4644	0	1	0
chr20:35913249\|35914197	hsa-miR-4658	1	0	0
chr20:35913249\|35914197	hsa-miR-4683	0	1	0
chr20:35913249\|35914197	hsa-miR-4689	0	1	0
chr20:35913249\|35914197	hsa-miR-4784	0	1	0
chr20:35913249\|35914197	hsa-miR-5094	0	1	0
chr20:35913249\|35914197	hsa-miR-6088	1	0	0
chr20:35913249\|35914197	hsa-miR-6124	1	1	0
chr20:35913249\|35914197	hsa-miR-6127	1	0	0
chr20:35913249\|35914197	hsa-miR-12128	1	0	0
chr20:35913249\|35914197	hsa-miR-17-3p	0	1	0
chr20:35913249\|35914197	hsa-miR-4433b-3p	1	0	0
chr20:35913249\|35914197	hsa-miR-6840-3p	0	1	0
chr20:35913249\|35914197	hsa-miR-6809-5p	1	1	0
chr20:35913249\|35914197	hsa-miR-3934-5p	0	1	0
chr20:35913249\|35914197	hsa-miR-6873-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-4653-3p	1	0	0
chr20:35913249\|35914197	hsa-miR-6759-5p	0	1	0
chr20:35913249\|35914197	hsa-miR-4725-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-4697-3p	1	1	0
chr20:35913249\|35914197	hsa-miR-3150b-3p	1	0	0
chr20:35913249\|35914197	hsa-miR-532-3p	1	0	0
chr20:35913249\|35914197	hsa-miR-4693-3p	0	1	0
chr20:35913249\|35914197	hsa-miR-193b-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-659-5p	0	1	0
chr20:35913249\|35914197	hsa-miR-4638-3p	0	1	0
chr20:35913249\|35914197	hsa-miR-3925-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-1306-5p	0	1	0
chr20:35913249\|35914197	hsa-miR-574-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-7846-3p	1	0	0
chr20:35913249\|35914197	hsa-miR-6814-5p	0	1	0
chr20:35913249\|35914197	hsa-miR-7113-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-589-5p	0	1	0
chr20:35913249\|35914197	hsa-miR-1233-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-6787-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-6754-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-6722-3p	1	0	0
chr20:35913249\|35914197	hsa-miR-6780a-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-320a-5p	0	1	0
chr20:35913249\|35914197	hsa-miR-4685-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-6831-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-6739-5p	0	1	0
chr20:35913249\|35914197	hsa-miR-6758-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-6856-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-1285-3p	0	1	0
chr20:35913249\|35914197	hsa-miR-6855-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-6891-5p	1	0	0
chr20:35913249\|35914197	hsa-miR-6724-5p	1	1	0
chr20:35913249\|35914197	hsa-miR-412-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:35913249\|35914197
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MPSSVPSCSRAHRFGFLFLFLFLLWLHSHKLLEFLLFILFLVFC
Nucleotide Sequence	ATGCCTTCATCTGTACCATCCTGCAGCAGGGCACACAGGTTTGGTTTTCTTTTTCTTTTTCTTTTTCTTCTTTGGCTTCACTCTCACAAACTCCTTGAATTTCTTCTCTTTATTCTTTTCCTTGTCTTTTGT

CircID	chr20:35913249\|35914197
ORF Type	ORF2
Protein Length	82
Nucleotide Length	246
Protein Sequence	LCEDPHLVTANALGGEGSWEVSLISSLQGHSAHLLTLRCLHLYHPAAGHTGLVFFFFFFFFFGFTLTNSLNFFSLFFSLSFV
Nucleotide Sequence	TTGTGTGAGGACCCACACCTGGTAACAGCAAATGCCTTGGGTGGAGAAGGTTCCTGGGAGGTGTCACTGATCTCCTCACTGCAGGGGCATTCTGCACATCTGCTTACACTTCGATGCCTTCATCTGTACCATCCTGCAGCAGGGCACACAGGTTTGGTTTTCTTTTTCTTTTTCTTTTTCTTCTTTGGCTTCACTCTCACAAACTCCTTGAATTTCTTCTCTTTATTCTTTTCCTTGTCTTTTGTA

CircID	chr20:35913249\|35914197
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MLSLSLCGVQILGHEAAGSYGPLACVRTHTW*
Nucleotide Sequence	ATGCTTTCACTTTCCCTTTGTGGTGTCCAGATTCTGGGCCATGAAGCTGCGGGCTCATATGGACCCCTGGCTTGTGTGAGGACCCACACCTGGTAA

CircID	chr20:35913249\|35914197
ORF Type	ORF1
Protein Length	31
Nucleotide Length	93
Protein Sequence	MVFFFFFFFFFGFTLTNSLNFFSLFFSLSFV
Nucleotide Sequence	TTGGTTTTCTTTTTCTTTTTCTTTTTCTTCTTTGGCTTCACTCTCACAAACTCCTTGAATTTCTTCTCTTTATTCTTTTCCTTGTCTTTTGTA

CircID	chr20:35913249\|35914197
ORF Type	ORF1
Protein Length	31
Nucleotide Length	96
Protein Sequence	MLSLSLCGVQILGHEAAGSYGPLACVRTHTW
Nucleotide Sequence	ATGCTTTCACTTTCCCTTTGTGGTGTCCAGATTCTGGGCCATGAAGCTGCGGGCTCATATGGACCCCTGGCTTGTGTGAGGACCCACACCTGGTAA

CircID	chr20:35913249\|35914197
ORF Type	ORF2
Protein Length	32
Nucleotide Length	96
Protein Sequence	MCEDPHLVTANALGGEGSWEVSLISSLQGHFV
Nucleotide Sequence	TTGTGTGAGGACCCACACCTGGTAACAGCAAATGCCTTGGGTGGAGAAGGTTCCTGGGAGGTGTCACTGATCTCCTCACTGCAGGGGCATTTTGTA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr20:35913249\|35914197	NOP56	1	0	1
chr20:35913249\|35914197	ELAVL1	5	1	0
chr20:35913249\|35914197	UPF1	0	0	1
chr20:35913249\|35914197	TAF15	0	1	0
chr20:35913249\|35914197	FMR1	0	0	3
chr20:35913249\|35914197	CPSF6	0	0	1
chr20:35913249\|35914197	NUDT21	0	1	0
chr20:35913249\|35914197	FUS	0	1	1
chr20:35913249\|35914197	NOP58	0	0	3
chr20:35913249\|35914197	SRSF3	1	0	0
chr20:35913249\|35914197	ADAR	1	0	0
chr20:35913249\|35914197	U2AF2	8	7	1
chr20:35913249\|35914197	DDX54	0	0	9
chr20:35913249\|35914197	PTBP1	9	0	0
chr20:35913249\|35914197	HNRNPC	1	4	0
chr20:35913249\|35914197	TRA2A	0	0	3
chr20:35913249\|35914197	ACIN1	3	0	4
chr20:35913249\|35914197	HNRNPA1	4	1	0
chr20:35913249\|35914197	IGF2BP2	2	2	2
chr20:35913249\|35914197	TARDBP	6	0	0
chr20:35913249\|35914197	BUD13	0	0	2
chr20:35913249\|35914197	RBM47	0	0	1
chr20:35913249\|35914197	EIF4G2	0	0	1
chr20:35913249\|35914197	CSTF2T	1	0	2
chr20:35913249\|35914197	CSTF2	1	0	0
chr20:35913249\|35914197	TARBP2	0	1	0
chr20:35913249\|35914197	EIF4A3	4	2	4
chr20:35913249\|35914197	AGO2	0	0	1

CircRNA Information