CircRNA Information

General Information
circRNA Basic Information
CircID chr20:36785777|36786049
Strand -
CircType exon
Host Gene ENSG00000149639.13;
Algorism CIRI2;
Sequence TCCCCAACCCTGAGCCCTGCATGTTTCCACTTCGCCTCCCAGCTCTTGCTGCATCCAGGCTATGGGCAGGGAGATCCAGGGCTCCAGGACACTAAGCAATGGCCCTGGCTACTGCCCTATCATACTCCCTAGTGTCCCAGCAATCTAGAGCAGTGGGGCTGGGAGGAGGAGGTGGTGGAGAGAAGGAGGTGATGGTGATGATGCCCAACAGGGCTCCACCAGGAACCAAACATGGAGCCCTAGAGCAAAGCCTGTTCTTCTCAGCAGTGTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:36785777|36786049 hsa-miR-107 0 0 1
chr20:36785777|36786049 hsa-miR-335-5p 0 0 1
chr20:36785777|36786049 hsa-miR-335-3p 0 0 1
chr20:36785777|36786049 hsa-miR-494-5p 0 0 1
chr20:36785777|36786049 hsa-miR-494-3p 0 0 1
chr20:36785777|36786049 hsa-miR-575 0 0 1
chr20:36785777|36786049 hsa-miR-596 0 0 1
chr20:36785777|36786049 hsa-miR-659-5p 0 0 1
chr20:36785777|36786049 hsa-miR-659-3p 0 0 1
chr20:36785777|36786049 hsa-miR-942-5p 0 0 1
chr20:36785777|36786049 hsa-miR-942-3p 0 0 1
chr20:36785777|36786049 hsa-miR-1237-5p 0 0 1
chr20:36785777|36786049 hsa-miR-1237-3p 0 0 1
chr20:36785777|36786049 hsa-miR-1248 0 0 1
chr20:36785777|36786049 hsa-miR-1253 0 0 1
chr20:36785777|36786049 hsa-miR-1266-5p 0 0 1
chr20:36785777|36786049 hsa-miR-1266-3p 0 0 1
chr20:36785777|36786049 hsa-miR-1321 0 0 1
chr20:36785777|36786049 hsa-miR-296-3p 0 1 1
chr20:36785777|36786049 hsa-miR-146b-3p 0 0 1
chr20:36785777|36786049 hsa-miR-1302 0 0 1
chr20:36785777|36786049 hsa-miR-220b 0 0 1
chr20:36785777|36786049 hsa-miR-1233 0 0 1
chr20:36785777|36786049 hsa-miR-103 0 0 1
chr20:36785777|36786049 hsa-miR-1274b 0 0 1
chr20:36785777|36786049 hsa-miR-1300 0 0 1
chr20:36785777|36786049 hsa-miR-1254 0 0 1
chr20:36785777|36786049 hsa-miR-24 0 0 1
chr20:36785777|36786049 hsa-miR-940 1 0 0
chr20:36785777|36786049 hsa-miR-1203 1 0 0
chr20:36785777|36786049 hsa-miR-1281 0 1 0
chr20:36785777|36786049 hsa-miR-1538 1 0 0
chr20:36785777|36786049 hsa-miR-4298 0 1 0
chr20:36785777|36786049 hsa-miR-4308 0 1 0
chr20:36785777|36786049 hsa-miR-4323 0 1 0
chr20:36785777|36786049 hsa-miR-4254 0 1 0
chr20:36785777|36786049 hsa-miR-4268 0 1 0
chr20:36785777|36786049 hsa-miR-3665 1 0 0
chr20:36785777|36786049 hsa-miR-4437 0 1 0
chr20:36785777|36786049 hsa-miR-4456 0 1 0
chr20:36785777|36786049 hsa-miR-4498 0 1 0
chr20:36785777|36786049 hsa-miR-1587 1 0 0
chr20:36785777|36786049 hsa-miR-4538 1 1 0
chr20:36785777|36786049 hsa-miR-4706 1 0 0
chr20:36785777|36786049 hsa-miR-4721 1 0 0
chr20:36785777|36786049 hsa-miR-5193 1 1 0
chr20:36785777|36786049 hsa-miR-5787 1 1 0
chr20:36785777|36786049 hsa-miR-6090 1 0 0
chr20:36785777|36786049 hsa-miR-6132 0 1 0
chr20:36785777|36786049 hsa-miR-12117 0 1 0
chr20:36785777|36786049 hsa-miR-197-3p 1 1 0
chr20:36785777|36786049 hsa-miR-93-3p 0 1 0
chr20:36785777|36786049 hsa-miR-92a-2-5p 0 1 0
chr20:36785777|36786049 hsa-miR-1233-3p 0 1 0
chr20:36785777|36786049 hsa-miR-6799-5p 1 0 0
chr20:36785777|36786049 hsa-miR-3192-5p 0 1 0
chr20:36785777|36786049 hsa-miR-7160-5p 1 0 0
chr20:36785777|36786049 hsa-miR-6776-5p 1 1 0
chr20:36785777|36786049 hsa-miR-877-3p 1 0 0
chr20:36785777|36786049 hsa-miR-30b-3p 0 1 0
chr20:36785777|36786049 hsa-miR-5006-5p 1 0 0
chr20:36785777|36786049 hsa-miR-6884-3p 0 1 0
chr20:36785777|36786049 hsa-miR-1343-3p 0 1 0
chr20:36785777|36786049 hsa-miR-5088-5p 0 1 0
chr20:36785777|36786049 hsa-miR-4640-5p 1 0 0
chr20:36785777|36786049 hsa-miR-7113-3p 1 1 0
chr20:36785777|36786049 hsa-miR-6771-5p 1 0 0
chr20:36785777|36786049 hsa-miR-6823-5p 0 1 0
chr20:36785777|36786049 hsa-miR-6501-5p 1 0 0
chr20:36785777|36786049 hsa-miR-6809-3p 0 1 0
chr20:36785777|36786049 hsa-miR-7111-3p 1 0 0
chr20:36785777|36786049 hsa-miR-4667-3p 1 1 0
chr20:36785777|36786049 hsa-miR-4446-5p 0 1 0
chr20:36785777|36786049 hsa-miR-3162-5p 0 1 0
chr20:36785777|36786049 hsa-miR-1306-5p 0 1 0
chr20:36785777|36786049 hsa-miR-103b 0 1 0
chr20:36785777|36786049 hsa-miR-6785-3p 1 0 0
chr20:36785777|36786049 hsa-miR-4758-3p 0 1 0
chr20:36785777|36786049 hsa-miR-1251-3p 0 1 0
chr20:36785777|36786049 hsa-miR-1224-3p 0 1 0
chr20:36785777|36786049 hsa-miR-6752-3p 0 1 0
chr20:36785777|36786049 hsa-miR-6880-3p 1 0 0
chr20:36785777|36786049 hsa-miR-1255b-2-3p 0 1 0
chr20:36785777|36786049 hsa-miR-6779-3p 0 1 0
chr20:36785777|36786049 hsa-miR-4704-5p 0 1 0
chr20:36785777|36786049 hsa-miR-517-5p 0 1 0
chr20:36785777|36786049 hsa-miR-4716-5p 0 1 0
chr20:36785777|36786049 hsa-miR-1207-5p 1 0 0
chr20:36785777|36786049 hsa-miR-1233-5p 1 0 0
chr20:36785777|36786049 hsa-miR-1273h-5p 0 1 0
chr20:36785777|36786049 hsa-miR-5001-5p 1 0 0
chr20:36785777|36786049 hsa-miR-7107-5p 1 0 0
chr20:36785777|36786049 hsa-miR-6780a-5p 0 1 0
chr20:36785777|36786049 hsa-miR-320a-5p 1 1 0
chr20:36785777|36786049 hsa-miR-3620-5p 1 0 0
chr20:36785777|36786049 hsa-miR-4728-5p 1 0 0
chr20:36785777|36786049 hsa-miR-10396b-5p 1 0 0
chr20:36785777|36786049 hsa-miR-328-5p 1 0 0
chr20:36785777|36786049 hsa-miR-3689a-3p 0 1 0
chr20:36785777|36786049 hsa-miR-4685-5p 1 1 0
chr20:36785777|36786049 hsa-miR-4726-5p 1 0 0
chr20:36785777|36786049 hsa-miR-6735-5p 0 1 0
chr20:36785777|36786049 hsa-miR-3198 0 1 0
chr20:36785777|36786049 hsa-miR-7843-5p 1 1 0
chr20:36785777|36786049 hsa-miR-3116 1 0 0
chr20:36785777|36786049 hsa-miR-324-3p 0 1 0
chr20:36785777|36786049 hsa-miR-6762-5p 1 0 0
chr20:36785777|36786049 hsa-miR-6511a-3p 0 1 0
chr20:36785777|36786049 hsa-miR-6792-3p 1 0 0
chr20:36785777|36786049 hsa-miR-6837-5p 0 1 0
chr20:36785777|36786049 hsa-miR-6511b-3p 0 1 0
chr20:36785777|36786049 hsa-miR-6859-5p 0 1 0
chr20:36785777|36786049 hsa-miR-6833-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:36785777|36786049
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MSPACFHFASQLLLHPGYGQGDPGLQDTKQWPWLLPYHTP
Nucleotide Sequence CTGAGCCCTGCATGTTTCCACTTCGCCTCCCAGCTCTTGCTGCATCCAGGCTATGGGCAGGGAGATCCAGGGCTCCAGGACACTAAGCAATGGCCCTGGCTACTGCCCTATCATACTCCCTAG
CircID chr20:36785777|36786049
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MHVSTSPPSSCCIQAMGREIQGSRTLSNGPGYCPIILPSVPAI
Nucleotide Sequence CTGCATGTTTCCACTTCGCCTCCCAGCTCTTGCTGCATCCAGGCTATGGGCAGGGAGATCCAGGGCTCCAGGACACTAAGCAATGGCCCTGGCTACTGCCCTATCATACTCCCTAGTGTCCCAGCAATCTAG
CircID chr20:36785777|36786049
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MALATALSYSLVSQQSRAVGLGGGGGGEKEVMVMMPNRAPPGTKHGALEQSLFFSAVS
Nucleotide Sequence ATGGCCCTGGCTACTGCCCTATCATACTCCCTAGTGTCCCAGCAATCTAGAGCAGTGGGGCTGGGAGGAGGAGGTGGTGGAGAGAAGGAGGTGATGGTGATGATGCCCAACAGGGCTCCACCAGGAACCAAACATGGAGCCCTAGAGCAAAGCCTGTTCTTCTCAGCAGTGTCT
CircID chr20:36785777|36786049
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MLRRTGFALGLHVWFLVEPCWASSPSPPSLHHLLLPAPLL
Nucleotide Sequence CTGCTGAGAAGAACAGGCTTTGCTCTAGGGCTCCATGTTTGGTTCCTGGTGGAGCCCTGTTGGGCATCATCACCATCACCTCCTTCTCTCCACCACCTCCTCCTCCCAGCCCCACTGCTCTAG
CircID chr20:36785777|36786049
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MLSVLEPWISLPIAWMQQELGGEVETCRAQGWG
Nucleotide Sequence TTGCTTAGTGTCCTGGAGCCCTGGATCTCCCTGCCCATAGCCTGGATGCAGCAAGAGCTGGGAGGCGAAGTGGAAACATGCAGGGCTCAGGGTTGGGGA
CircID chr20:36785777|36786049
ORF Type ORF6
Protein Length 34
Nucleotide Length 105
Protein Sequence MFGSWWSPVGHHHHHLLLSTTSSSQPHCSRLLGH
Nucleotide Sequence ATGTTTGGTTCCTGGTGGAGCCCTGTTGGGCATCATCACCATCACCTCCTTCTCTCCACCACCTCCTCCTCCCAGCCCCACTGCTCTAGATTGCTGGGACACTAG
CircID chr20:36785777|36786049
ORF Type ORF7
Protein Length 45
Nucleotide Length 138
Protein Sequence MVPGGALLGIITITSFSPPPPPPSPTALDCWDTREYDRAVARAIA
Nucleotide Sequence TTGGTTCCTGGTGGAGCCCTGTTGGGCATCATCACCATCACCTCCTTCTCTCCACCACCTCCTCCTCCCAGCCCCACTGCTCTAGATTGCTGGGACACTAGGGAGTATGATAGGGCAGTAGCCAGGGCCATTGCTTAG
CircID chr20:36785777|36786049
ORF Type ORF8
Protein Length 26
Nucleotide Length 78
Protein Sequence MDLPAHSLDAARAGRRSGNMQGSGLG
Nucleotide Sequence CTGGATCTCCCTGCCCATAGCCTGGATGCAGCAAGAGCTGGGAGGCGAAGTGGAAACATGCAGGGCTCAGGGTTGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab