CircRNA Information

General Information
circRNA Basic Information
CircID chr20:3689979|3690154
Strand +
CircType exon
Host Gene ENSG00000088827.11;
Algorism CIRI2;
Sequence CTTGGCAGTCGACTGGTGGCCTCCAGTCAGCCCCAGGGTGCTCCTGCAGAGCCACACATCCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGGACATCGAGGCGCTGAGGCCCAGCGACCAAGGGGAATACATCTGTTCTGCCTCAAATGTCCTGGGCTCTGCCTCTACCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:3689979|3690154 hsa-let-7b-5p 0 0 1
chr20:3689979|3690154 hsa-let-7b-3p 0 0 1
chr20:3689979|3690154 hsa-let-7c-5p 0 0 1
chr20:3689979|3690154 hsa-let-7c-3p 0 0 1
chr20:3689979|3690154 hsa-let-7d-5p 0 0 1
chr20:3689979|3690154 hsa-let-7d-3p 0 0 1
chr20:3689979|3690154 hsa-let-7e-5p 0 0 1
chr20:3689979|3690154 hsa-let-7e-3p 0 0 1
chr20:3689979|3690154 hsa-miR-98-5p 0 0 1
chr20:3689979|3690154 hsa-miR-98-3p 0 0 1
chr20:3689979|3690154 hsa-let-7g-5p 0 0 1
chr20:3689979|3690154 hsa-let-7g-3p 0 0 1
chr20:3689979|3690154 hsa-let-7i-5p 0 0 1
chr20:3689979|3690154 hsa-let-7i-3p 0 0 1
chr20:3689979|3690154 hsa-miR-625-5p 0 0 1
chr20:3689979|3690154 hsa-miR-625-3p 0 0 1
chr20:3689979|3690154 hsa-miR-630 0 0 1
chr20:3689979|3690154 hsa-miR-650 0 0 1
chr20:3689979|3690154 hsa-miR-760 0 0 1
chr20:3689979|3690154 hsa-miR-1205 0 0 1
chr20:3689979|3690154 hsa-miR-1286 0 0 1
chr20:3689979|3690154 hsa-miR-1304-5p 0 0 1
chr20:3689979|3690154 hsa-miR-1304-3p 0 0 1
chr20:3689979|3690154 hsa-miR-1256 0 0 1
chr20:3689979|3690154 hsa-miR-1266-5p 0 0 1
chr20:3689979|3690154 hsa-miR-1266-3p 0 0 1
chr20:3689979|3690154 hsa-miR-1275 0 0 1
chr20:3689979|3690154 hsa-miR-1827 0 0 1
chr20:3689979|3690154 hsa-miR-671-5p 1 1 1
chr20:3689979|3690154 hsa-miR-1184 0 0 1
chr20:3689979|3690154 hsa-miR-490-5p 0 0 1
chr20:3689979|3690154 hsa-miR-644 0 0 1
chr20:3689979|3690154 hsa-let-7a 0 0 1
chr20:3689979|3690154 hsa-let-7f 0 0 1
chr20:3689979|3690154 hsa-miR-147 0 0 1
chr20:3689979|3690154 hsa-miR-637 1 0 0
chr20:3689979|3690154 hsa-miR-644a 0 1 0
chr20:3689979|3690154 hsa-miR-2278 0 1 0
chr20:3689979|3690154 hsa-miR-3132 0 1 0
chr20:3689979|3690154 hsa-miR-4292 0 1 0
chr20:3689979|3690154 hsa-miR-4436a 0 1 0
chr20:3689979|3690154 hsa-miR-4458 0 1 0
chr20:3689979|3690154 hsa-miR-4525 1 0 0
chr20:3689979|3690154 hsa-miR-4656 0 1 0
chr20:3689979|3690154 hsa-miR-4706 1 0 0
chr20:3689979|3690154 hsa-miR-5090 1 0 0
chr20:3689979|3690154 hsa-miR-5683 0 1 0
chr20:3689979|3690154 hsa-miR-5698 1 0 0
chr20:3689979|3690154 hsa-miR-8057 0 1 0
chr20:3689979|3690154 hsa-miR-6840-3p 0 1 0
chr20:3689979|3690154 hsa-miR-6765-5p 1 0 0
chr20:3689979|3690154 hsa-miR-1972 1 0 0
chr20:3689979|3690154 hsa-miR-6089 1 0 0
chr20:3689979|3690154 hsa-miR-6880-5p 0 1 0
chr20:3689979|3690154 hsa-miR-7847-3p 0 1 0
chr20:3689979|3690154 hsa-miR-4722-5p 0 1 0
chr20:3689979|3690154 hsa-miR-6727-5p 1 0 0
chr20:3689979|3690154 hsa-miR-185-3p 0 1 0
chr20:3689979|3690154 hsa-miR-6850-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6852-5p 0 1 0
chr20:3689979|3690154 hsa-miR-939-3p 0 1 0
chr20:3689979|3690154 hsa-miR-7109-5p 1 0 0
chr20:3689979|3690154 hsa-miR-4786-3p 0 1 0
chr20:3689979|3690154 hsa-miR-6753-5p 1 0 0
chr20:3689979|3690154 hsa-miR-3127-5p 0 1 0
chr20:3689979|3690154 hsa-miR-3189-3p 0 1 0
chr20:3689979|3690154 hsa-miR-6866-5p 0 1 0
chr20:3689979|3690154 hsa-let-7a-5p 0 1 0
chr20:3689979|3690154 hsa-miR-4742-3p 0 1 0
chr20:3689979|3690154 hsa-miR-6871-3p 0 1 0
chr20:3689979|3690154 hsa-miR-668-5p 0 1 0
chr20:3689979|3690154 hsa-miR-219b-5p 0 1 0
chr20:3689979|3690154 hsa-miR-589-3p 0 1 0
chr20:3689979|3690154 hsa-miR-1233-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6778-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6812-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6775-5p 1 1 0
chr20:3689979|3690154 hsa-miR-1343-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6743-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6752-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6803-5p 1 1 0
chr20:3689979|3690154 hsa-miR-6751-5p 1 0 0
chr20:3689979|3690154 hsa-miR-7111-5p 1 1 0
chr20:3689979|3690154 hsa-miR-5196-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6780b-5p 1 1 0
chr20:3689979|3690154 hsa-miR-6836-5p 0 1 0
chr20:3689979|3690154 hsa-miR-4632-5p 1 0 0
chr20:3689979|3690154 hsa-miR-4649-5p 1 0 0
chr20:3689979|3690154 hsa-miR-4685-5p 1 1 0
chr20:3689979|3690154 hsa-miR-6795-5p 1 0 0
chr20:3689979|3690154 hsa-miR-4723-5p 1 1 0
chr20:3689979|3690154 hsa-miR-6831-5p 0 1 0
chr20:3689979|3690154 hsa-miR-939-5p 1 0 0
chr20:3689979|3690154 hsa-miR-1910-3p 0 1 0
chr20:3689979|3690154 hsa-miR-4665-5p 1 1 0
chr20:3689979|3690154 hsa-miR-4716-3p 1 1 0
chr20:3689979|3690154 hsa-miR-6785-5p 1 0 0
chr20:3689979|3690154 hsa-miR-6791-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr20:3689979|3690154
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MVASSQPQGAPAEPHIHVLASPNALRVDIEALRPSDQGEYICSASNVLGSASTS
Nucleotide Sequence CTGGTGGCCTCCAGTCAGCCCCAGGGTGCTCCTGCAGAGCCACACATCCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGGACATCGAGGCGCTGAGGCCCAGCGACCAAGGGGAATACATCTGTTCTGCCTCAAATGTCCTGGGCTCTGCCTCTACCTCC

CircID chr20:3689979|3690154
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence LAVDWWPPVSPRVLLQSHTSMSWLPPMP
Nucleotide Sequence TTGGCAGTCGACTGGTGGCCTCCAGTCAGCCCCAGGGTGCTCCTGCAGAGCCACACATCCATGTCCTGGCTTCCCCCAATGCCCTGA

CircID chr20:3689979|3690154
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MYSPWSLGLSASMSTLRALGEARTWMCGSAGAPWG
Nucleotide Sequence ATGTATTCCCCTTGGTCGCTGGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCATTGGGGGAAGCCAGGACATGGATGTGTGGCTCTGCAGGAGCACCCTGGGGCTGA

CircID chr20:3689979|3690154
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MRQNRCIPLGRWASAPRCPPSGHWGKPGHGCVALQEHPGADWRPPVDCQ
Nucleotide Sequence TTGAGGCAGAACAGATGTATTCCCCTTGGTCGCTGGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCATTGGGGGAAGCCAGGACATGGATGTGTGGCTCTGCAGGAGCACCCTGGGGCTGACTGGAGGCCACCAGTCGACTGCCAA

CircID chr20:3689979|3690154
ORF Type ORF5
Protein Length 41
Nucleotide Length 123
Protein Sequence MVAGPQRLDVHPQGIGGSQDMDVWLCRSTLGLTGGHQSTAK
Nucleotide Sequence TTGGTCGCTGGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCATTGGGGGAAGCCAGGACATGGATGTGTGGCTCTGCAGGAGCACCCTGGGGCTGACTGGAGGCCACCAGTCGACTGCCAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites