CircRNA Information

General Information
circRNA Basic Information
CircID chr20:3784994|3785136
Strand -
CircType exon
Host Gene ENSG00000125817.7;
Algorism CIRI2;
Sequence TGGGCTTCCTCCTGGGCACCATAAGCCCCGAAGCTGCCACCGGCCTCCACTACTCCCTGGGCCCAGTCCTCAGCCTCCAAGCCCTCCGAGGAGCTCTCCTCATCTTCCTCCTCTTCTTCATCACTATCAACATCACCCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:3784994|3785136 hsa-miR-432-5p 0 0 1
chr20:3784994|3785136 hsa-miR-432-3p 0 0 1
chr20:3784994|3785136 hsa-miR-584-5p 0 0 1
chr20:3784994|3785136 hsa-miR-584-3p 0 0 1
chr20:3784994|3785136 hsa-miR-650 0 0 1
chr20:3784994|3785136 hsa-miR-665 0 0 1
chr20:3784994|3785136 hsa-miR-671-5p 0 0 1
chr20:3784994|3785136 hsa-miR-296-5p 0 0 1
chr20:3784994|3785136 hsa-miR-1224-5p 1 0 1
chr20:3784994|3785136 hsa-miR-885-3p 0 0 1
chr20:3784994|3785136 hsa-miR-485-5p 0 0 1
chr20:3784994|3785136 hsa-miR-768-5p 0 0 1
chr20:3784994|3785136 hsa-miR-1245 0 0 1
chr20:3784994|3785136 hsa-miR-762 1 0 0
chr20:3784994|3785136 hsa-miR-1268a 1 0 0
chr20:3784994|3785136 hsa-miR-1321 1 0 0
chr20:3784994|3785136 hsa-miR-3125 1 0 0
chr20:3784994|3785136 hsa-miR-3131 1 0 0
chr20:3784994|3785136 hsa-miR-3154 1 0 0
chr20:3784994|3785136 hsa-miR-3185 1 0 0
chr20:3784994|3785136 hsa-miR-4270 1 0 0
chr20:3784994|3785136 hsa-miR-4281 1 0 0
chr20:3784994|3785136 hsa-miR-3916 1 0 0
chr20:3784994|3785136 hsa-miR-3929 1 0 0
chr20:3784994|3785136 hsa-miR-1268b 1 0 0
chr20:3784994|3785136 hsa-miR-4428 1 0 0
chr20:3784994|3785136 hsa-miR-4437 1 0 0
chr20:3784994|3785136 hsa-miR-4463 1 0 0
chr20:3784994|3785136 hsa-miR-4505 1 0 0
chr20:3784994|3785136 hsa-miR-4515 1 0 0
chr20:3784994|3785136 hsa-miR-4516 1 0 0
chr20:3784994|3785136 hsa-miR-4534 1 0 0
chr20:3784994|3785136 hsa-miR-1587 1 0 0
chr20:3784994|3785136 hsa-miR-4538 1 0 0
chr20:3784994|3785136 hsa-miR-4651 1 0 0
chr20:3784994|3785136 hsa-miR-4656 1 0 0
chr20:3784994|3785136 hsa-miR-4674 1 0 0
chr20:3784994|3785136 hsa-miR-4689 1 0 0
chr20:3784994|3785136 hsa-miR-4706 1 0 0
chr20:3784994|3785136 hsa-miR-4721 1 0 0
chr20:3784994|3785136 hsa-miR-4734 1 0 0
chr20:3784994|3785136 hsa-miR-4739 1 0 0
chr20:3784994|3785136 hsa-miR-4784 1 0 0
chr20:3784994|3785136 hsa-miR-5192 1 0 0
chr20:3784994|3785136 hsa-miR-5703 1 0 0
chr20:3784994|3785136 hsa-miR-5705 1 0 0
chr20:3784994|3785136 hsa-miR-5787 1 0 0
chr20:3784994|3785136 hsa-miR-6075 1 0 0
chr20:3784994|3785136 hsa-miR-6081 1 0 0
chr20:3784994|3785136 hsa-miR-6086 1 0 0
chr20:3784994|3785136 hsa-miR-6088 1 0 0
chr20:3784994|3785136 hsa-miR-6124 1 0 0
chr20:3784994|3785136 hsa-miR-6165 1 0 0
chr20:3784994|3785136 hsa-miR-6860 1 0 0
chr20:3784994|3785136 hsa-miR-8075 1 0 0
chr20:3784994|3785136 hsa-miR-8089 1 0 0
chr20:3784994|3785136 hsa-miR-12115 1 0 0
chr20:3784994|3785136 hsa-miR-12118 1 0 0
chr20:3784994|3785136 hsa-miR-4433b-3p 1 0 0
chr20:3784994|3785136 hsa-miR-122-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6734-5p 1 0 0
chr20:3784994|3785136 hsa-miR-7155-5p 1 0 0
chr20:3784994|3785136 hsa-miR-3150a-3p 1 0 0
chr20:3784994|3785136 hsa-miR-6894-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6510-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6804-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6833-5p 1 0 0
chr20:3784994|3785136 hsa-miR-1227-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6515-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6089 1 0 0
chr20:3784994|3785136 hsa-miR-6880-5p 1 0 0
chr20:3784994|3785136 hsa-miR-7847-3p 1 0 0
chr20:3784994|3785136 hsa-miR-4695-5p 1 0 0
chr20:3784994|3785136 hsa-miR-4709-3p 1 0 0
chr20:3784994|3785136 hsa-miR-7160-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6727-5p 1 0 0
chr20:3784994|3785136 hsa-miR-4655-5p 1 0 0
chr20:3784994|3785136 hsa-miR-197-5p 1 0 0
chr20:3784994|3785136 hsa-miR-3180-3p 1 0 0
chr20:3784994|3785136 hsa-miR-6732-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6798-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6760-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6782-5p 1 0 0
chr20:3784994|3785136 hsa-miR-5008-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6786-5p 1 0 0
chr20:3784994|3785136 hsa-miR-5088-5p 1 0 0
chr20:3784994|3785136 hsa-miR-1226-5p 1 0 0
chr20:3784994|3785136 hsa-miR-4640-5p 1 0 0
chr20:3784994|3785136 hsa-miR-4743-5p 1 0 0
chr20:3784994|3785136 hsa-miR-149-3p 1 0 0
chr20:3784994|3785136 hsa-miR-6717-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6507-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6824-5p 1 0 0
chr20:3784994|3785136 hsa-miR-3162-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6781-5p 1 0 0
chr20:3784994|3785136 hsa-miR-664b-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6869-5p 1 0 0
chr20:3784994|3785136 hsa-miR-10400-5p 1 0 0
chr20:3784994|3785136 hsa-miR-4763-3p 1 0 0
chr20:3784994|3785136 hsa-miR-6769b-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6812-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6865-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6870-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6775-5p 1 0 0
chr20:3784994|3785136 hsa-miR-1343-5p 1 0 0
chr20:3784994|3785136 hsa-miR-5001-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6726-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6752-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6756-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6803-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6813-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6851-5p 1 0 0
chr20:3784994|3785136 hsa-miR-7110-5p 1 0 0
chr20:3784994|3785136 hsa-miR-11181-3p 1 0 0
chr20:3784994|3785136 hsa-miR-1249-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6751-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6763-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6797-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6879-5p 1 0 0
chr20:3784994|3785136 hsa-miR-3620-5p 1 0 0
chr20:3784994|3785136 hsa-miR-4728-5p 1 0 0
chr20:3784994|3785136 hsa-miR-5189-5p 1 0 0
chr20:3784994|3785136 hsa-miR-10396b-5p 1 0 0
chr20:3784994|3785136 hsa-miR-1237-5p 1 0 0
chr20:3784994|3785136 hsa-miR-328-5p 1 0 0
chr20:3784994|3785136 hsa-miR-4685-5p 1 0 0
chr20:3784994|3785136 hsa-miR-4701-3p 1 0 0
chr20:3784994|3785136 hsa-miR-4745-5p 1 0 0
chr20:3784994|3785136 hsa-miR-675-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6777-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6846-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6848-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6858-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6883-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6889-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6831-5p 1 0 0
chr20:3784994|3785136 hsa-miR-939-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6856-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6773-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6785-5p 1 0 0
chr20:3784994|3785136 hsa-miR-6724-5p 1 0 0
chr20:3784994|3785136 hsa-miR-10400-3p 1 0 0
chr20:3784994|3785136 hsa-miR-6884-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:3784994|3785136
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MPPASTTPWAQSSASKPSEELSSSSSSSSSLSTSPS
Nucleotide Sequence CTGCCACCGGCCTCCACTACTCCCTGGGCCCAGTCCTCAGCCTCCAAGCCCTCCGAGGAGCTCTCCTCATCTTCCTCCTCTTCTTCATCACTATCAACATCACCCTCC
CircID chr20:3784994|3785136
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MGTISPEAATGLHYSLGPVLSLQALRGALLIFLLFFITINITLL
Nucleotide Sequence CTGGGCACCATAAGCCCCGAAGCTGCCACCGGCCTCCACTACTCCCTGGGCCCAGTCCTCAGCCTCCAAGCCCTCCGAGGAGCTCTCCTCATCTTCCTCCTCTTCTTCATCACTATCAACATCACCCTCCTC
CircID chr20:3784994|3785136
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MEAEDWAQGVVEAGGSFGAYGAQEEA
Nucleotide Sequence TTGGAGGCTGAGGACTGGGCCCAGGGAGTAGTGGAGGCCGGTGGCAGCTTCGGGGCTTATGGTGCCCAGGAGGAAGCC
CircID chr20:3784994|3785136
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MLIVMKKRRKMRRAPRRAWRLRTGPRE
Nucleotide Sequence ATGTTGATAGTGATGAAGAAGAGGAGGAAGATGAGGAGAGCTCCTCGGAGGGCTTGGAGGCTGAGGACTGGGCCCAGGGAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab