CircNet

General Information

circRNA Basic Information

CircID	chr20:3875048\|3875224
Strand	+
CircType	exon
Host Gene	ENSG00000088888.16;
Algorism	CIRI2;
Sequence	CCAGGCTGGTCTCGAACTCCTGGCTTCTAGCAATCCTCCCACCTCAGTCTCCTGAATCACTGGGATTACAGGCTGGGGCCATCATGCCCAGCTCTAGGTTTTTAAAATGTAGGCAAGGAGGTCAGCATTTACACAAAAGCAGGGTTTGATCTTAGGAAGCTTAATAAAGAGAGGGGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:3875048\|3875224	hsa-miR-599	0	0	1
chr20:3875048\|3875224	hsa-miR-612	0	0	1
chr20:3875048\|3875224	hsa-miR-665	1	1	1
chr20:3875048\|3875224	hsa-miR-502-5p	0	0	1
chr20:3875048\|3875224	hsa-miR-628-5p	0	0	1
chr20:3875048\|3875224	hsa-miR-516a-3p	0	0	1
chr20:3875048\|3875224	hsa-miR-548d-3p	0	0	1
chr20:3875048\|3875224	hsa-miR-1285	0	0	1
chr20:3875048\|3875224	hsa-miR-4463	1	1	0
chr20:3875048\|3875224	hsa-miR-4487	0	1	0
chr20:3875048\|3875224	hsa-miR-4499	0	1	0
chr20:3875048\|3875224	hsa-miR-4689	1	0	0
chr20:3875048\|3875224	hsa-miR-4739	1	0	0
chr20:3875048\|3875224	hsa-miR-6134	0	1	0
chr20:3875048\|3875224	hsa-miR-8062	0	1	0
chr20:3875048\|3875224	hsa-miR-9718	0	1	0
chr20:3875048\|3875224	hsa-miR-12116	1	0	0
chr20:3875048\|3875224	hsa-miR-6734-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-4433a-3p	1	0	0
chr20:3875048\|3875224	hsa-miR-6765-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-6861-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-6894-5p	1	1	0
chr20:3875048\|3875224	hsa-miR-4786-5p	0	1	0
chr20:3875048\|3875224	hsa-miR-6746-5p	1	1	0
chr20:3875048\|3875224	hsa-miR-6849-3p	0	1	0
chr20:3875048\|3875224	hsa-miR-4728-3p	1	1	0
chr20:3875048\|3875224	hsa-miR-1915-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-6782-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-7162-3p	0	1	0
chr20:3875048\|3875224	hsa-miR-6778-5p	1	1	0
chr20:3875048\|3875224	hsa-miR-6775-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-6756-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-6851-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-6779-5p	0	1	0
chr20:3875048\|3875224	hsa-miR-3620-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-6862-5p	0	1	0
chr20:3875048\|3875224	hsa-miR-6795-5p	1	0	0
chr20:3875048\|3875224	hsa-miR-10398-3p	1	0	0
chr20:3875048\|3875224	hsa-miR-6829-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:3875048\|3875224
ORF Type	ORF1
Protein Length	47
Nucleotide Length	144
Protein Sequence	MVSNSWLLAILPPQSPESLGLQAGAIMPSSRFLKCRQGGQHLHKSRV
Nucleotide Sequence	CTGGTCTCGAACTCCTGGCTTCTAGCAATCCTCCCACCTCAGTCTCCTGAATCACTGGGATTACAGGCTGGGGCCATCATGCCCAGCTCTAGGTTTTTAAAATGTAGGCAAGGAGGTCAGCATTTACACAAAAGCAGGGTTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information