CircNet

General Information

circRNA Basic Information

CircID	chr20:41123240\|41123459
Strand	-
CircType	exon
Host Gene	ENSG00000198900.5;
Algorism	CIRI2;
Sequence	CCAGCGGGAGAAGTTTGCCTGGGCCATTGACATGGCTGATGAAGACTATGAGTTTTAGCCAGTCTCAAGAGGCAGAGTTCTGTGAAGAGGAACAGTGTGGTTTGGGAAAGATGGATAAACTGAGCCTCACTTGCCCTCGTGCCTGGGGGAGAGAGGCAGCAAGTCTTAACAAACCAACATCTTTGCGAAAAGATAAACCTGGAGATATTATAAGGGAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:41123240\|41123459	hsa-miR-27a-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-27a-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-208a-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-208a-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-27b-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-27b-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-374a-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-374a-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-412-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-412-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-526b-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-526b-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-766-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-766-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-892b	0	0	1
chr20:41123240\|41123459	hsa-miR-889-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-889-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-374b-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-374b-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-208b-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-208b-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-1208	0	0	1
chr20:41123240\|41123459	hsa-miR-548e-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-548e-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-485-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-361-3p	0	1	1
chr20:41123240\|41123459	hsa-miR-513a-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-548a-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-369-3p	0	0	1
chr20:41123240\|41123459	hsa-miR-548f	0	0	1
chr20:41123240\|41123459	hsa-miR-24	0	0	1
chr20:41123240\|41123459	hsa-miR-499-5p	0	0	1
chr20:41123240\|41123459	hsa-miR-623	1	0	0
chr20:41123240\|41123459	hsa-miR-1538	1	0	0
chr20:41123240\|41123459	hsa-miR-4326	0	1	0
chr20:41123240\|41123459	hsa-miR-4673	0	1	0
chr20:41123240\|41123459	hsa-miR-5087	0	1	0
chr20:41123240\|41123459	hsa-miR-5186	0	1	0
chr20:41123240\|41123459	hsa-miR-6075	1	0	0
chr20:41123240\|41123459	hsa-miR-4747-3p	1	0	0
chr20:41123240\|41123459	hsa-miR-3157-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-3622a-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-7110-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-2467-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-6715b-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-6882-3p	1	1	0
chr20:41123240\|41123459	hsa-miR-5001-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-3616-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-6715a-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-4680-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-130b-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-497-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-328-5p	1	1	0
chr20:41123240\|41123459	hsa-miR-6729-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-2682-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-3059-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-6769b-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-4691-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-6781-3p	0	1	0
chr20:41123240\|41123459	hsa-miR-6715b-5p	0	1	0
chr20:41123240\|41123459	hsa-miR-548aa	0	1	0
chr20:41123240\|41123459	hsa-miR-548t-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:41123240\|41123459
ORF Type	ORF1
Protein Length	68
Nucleotide Length	204
Protein Sequence	MPGPLTWLMKTMSFSQSQEAEFCEEEQCGLGKMDKLSLTCPRAWGREAASLNKPTSLRKDKPGDIIRE
Nucleotide Sequence	TTGCCTGGGCCATTGACATGGCTGATGAAGACTATGAGTTTTAGCCAGTCTCAAGAGGCAGAGTTCTGTGAAGAGGAACAGTGTGGTTTGGGAAAGATGGATAAACTGAGCCTCACTTGCCCTCGTGCCTGGGGGAGAGAGGCAGCAAGTCTTAACAAACCAACATCTTTGCGAAAAGATAAACCTGGAGATATTATAAGGGAG

CircID	chr20:41123240\|41123459
ORF Type	ORF2
Protein Length	35
Nucleotide Length	108
Protein Sequence	MLRLAASLPQARGQVRLSLSIFPKPHCSSSQNSAS
Nucleotide Sequence	TTGTTAAGACTTGCTGCCTCTCTCCCCCAGGCACGAGGGCAAGTGAGGCTCAGTTTATCCATCTTTCCCAAACCACACTGTTCCTCTTCACAGAACTCTGCCTCTTGA

CircID	chr20:41123240\|41123459
ORF Type	ORF3
Protein Length	31
Nucleotide Length	93
Protein Sequence	MFLFTELCLLRLAKTHSLHQPCQWPRQTSPA
Nucleotide Sequence	CTGTTCCTCTTCACAGAACTCTGCCTCTTGAGACTGGCTAAAACTCATAGTCTTCATCAGCCATGTCAATGGCCCAGGCAAACTTCTCCCGCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information