CircRNA Information

General Information
circRNA Basic Information
CircID chr20:41174247|41174539
Strand +
CircType exon
Host Gene ENSG00000124181.13;
Algorism CIRI2;
Sequence CTGCTGCTCTCCAACGAGGCTGGGGTACAACTAGAGGCGGTTGTCTCCATTGACCCGAGTCCTTCTTGGGGCCCTGGACAGAAGGGAAGAGTGTCCTTACTGGCAGGCAGGGCCTTGCAGCCCAATGCCAGACAATATTACAACTTTTCTACCCAGGAGAAAGAAACACTGAAGAAGGAGGACCTAGCCACTGCCTTCCTGGCTCTAGCACCCCTCCATCTTCCTCACCTTCGTTCTCGACTGTCAAAATGGTCTGCGAGATGCTCCTGGGAGATGCGGAAGTCCTCAAACGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:41174247|41174539 hsa-miR-15a-5p 0 0 1
chr20:41174247|41174539 hsa-miR-15a-3p 0 0 1
chr20:41174247|41174539 hsa-miR-198 0 0 1
chr20:41174247|41174539 hsa-miR-34a-5p 0 0 1
chr20:41174247|41174539 hsa-miR-34a-3p 0 0 1
chr20:41174247|41174539 hsa-miR-204-5p 0 0 1
chr20:41174247|41174539 hsa-miR-204-3p 0 0 1
chr20:41174247|41174539 hsa-miR-211-5p 0 0 1
chr20:41174247|41174539 hsa-miR-211-3p 0 0 1
chr20:41174247|41174539 hsa-miR-15b-5p 0 0 1
chr20:41174247|41174539 hsa-miR-15b-3p 0 0 1
chr20:41174247|41174539 hsa-miR-150-5p 0 0 1
chr20:41174247|41174539 hsa-miR-150-3p 0 0 1
chr20:41174247|41174539 hsa-miR-185-5p 0 0 1
chr20:41174247|41174539 hsa-miR-185-3p 0 0 1
chr20:41174247|41174539 hsa-miR-195-5p 0 0 1
chr20:41174247|41174539 hsa-miR-195-3p 0 0 1
chr20:41174247|41174539 hsa-miR-382-5p 0 0 1
chr20:41174247|41174539 hsa-miR-382-3p 0 0 1
chr20:41174247|41174539 hsa-miR-424-5p 0 0 1
chr20:41174247|41174539 hsa-miR-424-3p 0 0 1
chr20:41174247|41174539 hsa-miR-449a 0 0 1
chr20:41174247|41174539 hsa-miR-497-5p 0 0 1
chr20:41174247|41174539 hsa-miR-497-3p 0 0 1
chr20:41174247|41174539 hsa-miR-617 0 1 1
chr20:41174247|41174539 hsa-miR-620 0 0 1
chr20:41174247|41174539 hsa-miR-623 0 0 1
chr20:41174247|41174539 hsa-miR-632 0 0 1
chr20:41174247|41174539 hsa-miR-449b-5p 0 0 1
chr20:41174247|41174539 hsa-miR-449b-3p 0 0 1
chr20:41174247|41174539 hsa-miR-665 0 0 1
chr20:41174247|41174539 hsa-miR-1231 0 0 1
chr20:41174247|41174539 hsa-miR-1236-5p 0 0 1
chr20:41174247|41174539 hsa-miR-1236-3p 0 0 1
chr20:41174247|41174539 hsa-miR-1237-5p 0 0 1
chr20:41174247|41174539 hsa-miR-1237-3p 0 0 1
chr20:41174247|41174539 hsa-miR-1291 0 1 1
chr20:41174247|41174539 hsa-miR-1304-5p 0 0 1
chr20:41174247|41174539 hsa-miR-1304-3p 0 0 1
chr20:41174247|41174539 hsa-miR-1248 0 0 1
chr20:41174247|41174539 hsa-miR-1256 0 0 1
chr20:41174247|41174539 hsa-miR-1270 0 0 1
chr20:41174247|41174539 hsa-miR-1306-5p 0 0 1
chr20:41174247|41174539 hsa-miR-1306-3p 0 0 1
chr20:41174247|41174539 hsa-miR-1197 0 0 1
chr20:41174247|41174539 hsa-miR-296-5p 0 0 1
chr20:41174247|41174539 hsa-miR-1224-5p 0 0 1
chr20:41174247|41174539 hsa-miR-532-3p 0 0 1
chr20:41174247|41174539 hsa-miR-342-5p 0 1 1
chr20:41174247|41174539 hsa-miR-34c-5p 0 1 1
chr20:41174247|41174539 hsa-miR-16 0 0 1
chr20:41174247|41174539 hsa-miR-514 0 0 1
chr20:41174247|41174539 hsa-miR-661 1 0 0
chr20:41174247|41174539 hsa-miR-1203 1 0 0
chr20:41174247|41174539 hsa-miR-3132 0 1 0
chr20:41174247|41174539 hsa-miR-3714 0 1 0
chr20:41174247|41174539 hsa-miR-3918 0 1 0
chr20:41174247|41174539 hsa-miR-3135b 1 1 0
chr20:41174247|41174539 hsa-miR-4476 0 1 0
chr20:41174247|41174539 hsa-miR-4534 0 1 0
chr20:41174247|41174539 hsa-miR-4647 0 1 0
chr20:41174247|41174539 hsa-miR-4710 0 1 0
chr20:41174247|41174539 hsa-miR-5194 0 1 0
chr20:41174247|41174539 hsa-miR-6069 0 1 0
chr20:41174247|41174539 hsa-miR-6745 1 0 0
chr20:41174247|41174539 hsa-miR-8080 0 1 0
chr20:41174247|41174539 hsa-miR-6840-3p 0 1 0
chr20:41174247|41174539 hsa-miR-6765-5p 1 0 0
chr20:41174247|41174539 hsa-miR-6861-5p 1 1 0
chr20:41174247|41174539 hsa-miR-6894-5p 1 1 0
chr20:41174247|41174539 hsa-miR-139-3p 1 0 0
chr20:41174247|41174539 hsa-miR-6515-5p 0 1 0
chr20:41174247|41174539 hsa-miR-6730-5p 1 0 0
chr20:41174247|41174539 hsa-miR-505-5p 1 1 0
chr20:41174247|41174539 hsa-miR-197-5p 1 1 0
chr20:41174247|41174539 hsa-miR-4697-3p 0 1 0
chr20:41174247|41174539 hsa-miR-6827-5p 1 0 0
chr20:41174247|41174539 hsa-miR-6782-5p 0 1 0
chr20:41174247|41174539 hsa-miR-6786-5p 1 0 0
chr20:41174247|41174539 hsa-miR-4640-5p 1 1 0
chr20:41174247|41174539 hsa-miR-937-5p 1 0 0
chr20:41174247|41174539 hsa-miR-450a-2-3p 0 1 0
chr20:41174247|41174539 hsa-miR-7160-3p 0 1 0
chr20:41174247|41174539 hsa-miR-3158-3p 0 1 0
chr20:41174247|41174539 hsa-miR-7113-5p 0 1 0
chr20:41174247|41174539 hsa-miR-5088-3p 0 1 0
chr20:41174247|41174539 hsa-miR-3173-5p 0 1 0
chr20:41174247|41174539 hsa-miR-5699-5p 0 1 0
chr20:41174247|41174539 hsa-miR-4802-5p 0 1 0
chr20:41174247|41174539 hsa-miR-6743-5p 1 0 0
chr20:41174247|41174539 hsa-miR-6752-5p 1 1 0
chr20:41174247|41174539 hsa-miR-6774-5p 0 1 0
chr20:41174247|41174539 hsa-miR-4755-5p 0 1 0
chr20:41174247|41174539 hsa-miR-6836-5p 0 1 0
chr20:41174247|41174539 hsa-miR-449c-5p 0 1 0
chr20:41174247|41174539 hsa-miR-4685-5p 1 1 0
chr20:41174247|41174539 hsa-miR-4726-5p 1 0 0
chr20:41174247|41174539 hsa-miR-6738-5p 1 1 0
chr20:41174247|41174539 hsa-miR-939-5p 1 0 0
chr20:41174247|41174539 hsa-miR-1914-3p 0 1 0
chr20:41174247|41174539 hsa-miR-4747-5p 0 1 0
chr20:41174247|41174539 hsa-miR-6876-5p 0 1 0
chr20:41174247|41174539 hsa-miR-6837-5p 0 1 0
chr20:41174247|41174539 hsa-miR-5006-3p 0 1 0
chr20:41174247|41174539 hsa-miR-2682-5p 0 1 0
chr20:41174247|41174539 hsa-miR-6505-3p 0 1 0
chr20:41174247|41174539 hsa-miR-4799-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:41174247|41174539
ORF Type ORF1
Protein Length 97
Nucleotide Length 291
Protein Sequence LLLSNEAGVQLEAVVSIDPSPSWGPGQKGRVSLLAGRALQPNARQYYNFSTQEKETLKKEDLATAFLALAPLHLPHLRSRLSKWSARCSWEMRKSSN
Nucleotide Sequence CTGCTGCTCTCCAACGAGGCTGGGGTACAACTAGAGGCGGTTGTCTCCATTGACCCGAGTCCTTCTTGGGGCCCTGGACAGAAGGGAAGAGTGTCCTTACTGGCAGGCAGGGCCTTGCAGCCCAATGCCAGACAATATTACAACTTTTCTACCCAGGAGAAAGAAACACTGAAGAAGGAGGACCTAGCCACTGCCTTCCTGGCTCTAGCACCCCTCCATCTTCCTCACCTTCGTTCTCGACTGTCAAAATGGTCTGCGAGATGCTCCTGGGAGATGCGGAAGTCCTCAAAC

CircID chr20:41174247|41174539
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MSPLTRVLLGALDRREECPYWQAGPCSPMPDNITTFLPRRKKH
Nucleotide Sequence TTGTCTCCATTGACCCGAGTCCTTCTTGGGGCCCTGGACAGAAGGGAAGAGTGTCCTTACTGGCAGGCAGGGCCTTGCAGCCCAATGCCAGACAATATTACAACTTTTCTACCCAGGAGAAAGAAACACTGA

CircID chr20:41174247|41174539
ORF Type ORF3
Protein Length 76
Nucleotide Length 228
Protein Sequence MGPWTEGKSVLTGRQGLAAQCQTILQLFYPGERNTEEGGPSHCLPGSSTPPSSSPSFSTVKMVCEMLLGDAEVLKR
Nucleotide Sequence TTGGGGCCCTGGACAGAAGGGAAGAGTGTCCTTACTGGCAGGCAGGGCCTTGCAGCCCAATGCCAGACAATATTACAACTTTTCTACCCAGGAGAAAGAAACACTGAAGAAGGAGGACCTAGCCACTGCCTTCCTGGCTCTAGCACCCCTCCATCTTCCTCACCTTCGTTCTCGACTGTCAAAATGGTCTGCGAGATGCTCCTGGGAGATGCGGAAGTCCTCAAACGG

CircID chr20:41174247|41174539
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MALGCKALPASKDTLPFCPGPQEGLGSMETTASSCTPASLESS
Nucleotide Sequence CTGGCATTGGGCTGCAAGGCCCTGCCTGCCAGTAAGGACACTCTTCCCTTCTGTCCAGGGCCCCAAGAAGGACTCGGGTCAATGGAGACAACCGCCTCTAGTTGTACCCCAGCCTCGTTGGAGAGCAGC

CircID chr20:41174247|41174539
ORF Type ORF5
Protein Length 46
Nucleotide Length 141
Protein Sequence MRTSASPRSISQTILTVENEGEEDGGVLEPGRQWLGPPSSVFLSPG
Nucleotide Sequence TTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAAGGTGAGGAAGATGGAGGGGTGCTAGAGCCAGGAAGGCAGTGGCTAGGTCCTCCTTCTTCAGTGTTTCTTTCTCCTGGGTAG

CircID chr20:41174247|41174539
ORF Type ORF6
Protein Length 35
Nucleotide Length 105
Protein Sequence MPVRTLFPSVQGPKKDSGQWRQPPLVVPQPRWRAA
Nucleotide Sequence CTGCCAGTAAGGACACTCTTCCCTTCTGTCCAGGGCCCCAAGAAGGACTCGGGTCAATGGAGACAACCGCCTCTAGTTGTACCCCAGCCTCGTTGGAGAGCAGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites