CircRNA Information

General Information
circRNA Basic Information
CircID chr20:41174895|41175040
Strand +
CircType exon
Host Gene ENSG00000124181.13;
Algorism CIRI2;
Sequence CCTTCTCCATGCAGGCCCTACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTGCCCAGCTGTGGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:41174895|41175040 hsa-miR-206 1 1 1
chr20:41174895|41175040 hsa-miR-328-5p 0 0 1
chr20:41174895|41175040 hsa-miR-328-3p 0 0 1
chr20:41174895|41175040 hsa-miR-561-5p 0 0 1
chr20:41174895|41175040 hsa-miR-561-3p 0 0 1
chr20:41174895|41175040 hsa-miR-612 1 1 1
chr20:41174895|41175040 hsa-miR-613 0 0 1
chr20:41174895|41175040 hsa-miR-1296-5p 0 0 1
chr20:41174895|41175040 hsa-miR-1296-3p 0 0 1
chr20:41174895|41175040 hsa-miR-765 0 0 1
chr20:41174895|41175040 hsa-miR-1291 0 0 1
chr20:41174895|41175040 hsa-miR-1253 0 0 1
chr20:41174895|41175040 hsa-miR-486-5p 0 0 1
chr20:41174895|41175040 hsa-miR-1207-3p 0 0 1
chr20:41174895|41175040 hsa-miR-140-3p 0 0 1
chr20:41174895|41175040 hsa-miR-1207-5p 1 0 1
chr20:41174895|41175040 hsa-miR-1300 0 0 1
chr20:41174895|41175040 hsa-miR-1285 0 0 1
chr20:41174895|41175040 hsa-miR-1 0 0 1
chr20:41174895|41175040 hsa-miR-663a 1 0 0
chr20:41174895|41175040 hsa-miR-658 1 1 0
chr20:41174895|41175040 hsa-miR-762 1 0 0
chr20:41174895|41175040 hsa-miR-940 1 0 0
chr20:41174895|41175040 hsa-miR-3137 0 1 0
chr20:41174895|41175040 hsa-miR-3141 1 0 0
chr20:41174895|41175040 hsa-miR-3147 1 1 0
chr20:41174895|41175040 hsa-miR-4254 0 1 0
chr20:41174895|41175040 hsa-miR-4327 0 1 0
chr20:41174895|41175040 hsa-miR-4429 1 0 0
chr20:41174895|41175040 hsa-miR-3135b 0 1 0
chr20:41174895|41175040 hsa-miR-4505 1 0 0
chr20:41174895|41175040 hsa-miR-4507 1 0 0
chr20:41174895|41175040 hsa-miR-1587 1 0 0
chr20:41174895|41175040 hsa-miR-4656 1 0 0
chr20:41174895|41175040 hsa-miR-4706 1 0 0
chr20:41174895|41175040 hsa-miR-4739 1 0 0
chr20:41174895|41175040 hsa-miR-4784 1 0 0
chr20:41174895|41175040 hsa-miR-5090 1 1 0
chr20:41174895|41175040 hsa-miR-5787 1 0 0
chr20:41174895|41175040 hsa-miR-6860 1 1 0
chr20:41174895|41175040 hsa-miR-7150 1 0 0
chr20:41174895|41175040 hsa-miR-8089 1 0 0
chr20:41174895|41175040 hsa-miR-4433b-3p 1 0 0
chr20:41174895|41175040 hsa-miR-504-3p 1 0 0
chr20:41174895|41175040 hsa-miR-6861-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6894-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6799-5p 1 0 0
chr20:41174895|41175040 hsa-miR-766-5p 1 0 0
chr20:41174895|41175040 hsa-miR-1227-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6807-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6757-5p 1 0 0
chr20:41174895|41175040 hsa-miR-4695-5p 1 0 0
chr20:41174895|41175040 hsa-miR-505-5p 0 1 0
chr20:41174895|41175040 hsa-miR-6721-5p 1 1 0
chr20:41174895|41175040 hsa-miR-197-5p 1 0 0
chr20:41174895|41175040 hsa-miR-5589-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6796-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6732-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6805-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6827-5p 1 0 0
chr20:41174895|41175040 hsa-miR-2467-3p 0 1 0
chr20:41174895|41175040 hsa-miR-5006-5p 1 0 0
chr20:41174895|41175040 hsa-miR-1226-5p 1 0 0
chr20:41174895|41175040 hsa-miR-1229-5p 1 0 0
chr20:41174895|41175040 hsa-miR-4640-5p 1 1 0
chr20:41174895|41175040 hsa-miR-6753-5p 1 1 0
chr20:41174895|41175040 hsa-miR-885-3p 1 0 0
chr20:41174895|41175040 hsa-miR-1228-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6847-5p 0 1 0
chr20:41174895|41175040 hsa-miR-937-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6781-5p 1 0 0
chr20:41174895|41175040 hsa-miR-7112-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6895-5p 1 0 0
chr20:41174895|41175040 hsa-miR-135b-3p 1 0 0
chr20:41174895|41175040 hsa-miR-1251-3p 0 1 0
chr20:41174895|41175040 hsa-miR-7113-5p 0 1 0
chr20:41174895|41175040 hsa-miR-497-3p 0 1 0
chr20:41174895|41175040 hsa-miR-4763-3p 1 1 0
chr20:41174895|41175040 hsa-miR-6787-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6816-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6775-5p 1 1 0
chr20:41174895|41175040 hsa-miR-6756-5p 1 0 0
chr20:41174895|41175040 hsa-miR-11181-3p 1 0 0
chr20:41174895|41175040 hsa-miR-6722-3p 1 0 0
chr20:41174895|41175040 hsa-miR-6774-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6779-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6780a-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6879-5p 1 1 0
chr20:41174895|41175040 hsa-miR-7111-5p 1 0 0
chr20:41174895|41175040 hsa-miR-3620-5p 1 0 0
chr20:41174895|41175040 hsa-miR-5189-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6836-5p 1 0 0
chr20:41174895|41175040 hsa-miR-10396b-5p 1 0 0
chr20:41174895|41175040 hsa-miR-4632-5p 1 1 0
chr20:41174895|41175040 hsa-miR-4685-5p 1 1 0
chr20:41174895|41175040 hsa-miR-4726-5p 1 1 0
chr20:41174895|41175040 hsa-miR-6729-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6735-5p 1 1 0
chr20:41174895|41175040 hsa-miR-6858-5p 0 1 0
chr20:41174895|41175040 hsa-miR-3187-5p 1 1 0
chr20:41174895|41175040 hsa-miR-4436b-3p 1 1 0
chr20:41174895|41175040 hsa-miR-6831-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6845-5p 1 1 0
chr20:41174895|41175040 hsa-miR-939-5p 1 0 0
chr20:41174895|41175040 hsa-miR-3198 1 0 0
chr20:41174895|41175040 hsa-miR-3940-5p 1 0 0
chr20:41174895|41175040 hsa-miR-7843-5p 0 1 0
chr20:41174895|41175040 hsa-miR-6736-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6791-5p 1 1 0
chr20:41174895|41175040 hsa-miR-6762-5p 1 0 0
chr20:41174895|41175040 hsa-miR-6837-5p 0 1 0
chr20:41174895|41175040 hsa-miR-6859-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:41174895|41175040
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MPWLQGQTAGASSFSPCPAVVLKLQDNVNFVSLAQQGSS
Nucleotide Sequence CTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTGCCCAGCTGTGGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCC
CircID chr20:41174895|41175040
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MSCSFKTTAGQGEKLDAPAVWPWSQGRGM
Nucleotide Sequence TTGTCCTGTAGCTTTAAAACCACAGCTGGGCAGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab