CircRNA Information

General Information
circRNA Basic Information
CircID chr20:421775|421937
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TGCCGCTCTGATTCTCTGGTCCAGGCCCCACATCCCCCACCTGGGTGACTCCAGGAGCCTCCTCGCTGGGCTCCCTGCATCCATCTGGCCCCTAGAGTCTATCTCAGAACAGCAGCCATGTCTCCCCAGTGACTCCCATCCTACCCAGAACAAATCCCAACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:421775|421937 hsa-miR-375-5p 0 0 1
chr20:421775|421937 hsa-miR-375-3p 0 0 1
chr20:421775|421937 hsa-miR-571 0 0 1
chr20:421775|421937 hsa-miR-604 0 0 1
chr20:421775|421937 hsa-miR-625-5p 0 0 1
chr20:421775|421937 hsa-miR-625-3p 0 0 1
chr20:421775|421937 hsa-miR-647 0 0 1
chr20:421775|421937 hsa-miR-939-5p 0 0 1
chr20:421775|421937 hsa-miR-939-3p 0 0 1
chr20:421775|421937 hsa-miR-1265 0 0 1
chr20:421775|421937 hsa-miR-1275 1 0 1
chr20:421775|421937 hsa-miR-491-5p 0 0 1
chr20:421775|421937 hsa-miR-299-3p 0 0 1
chr20:421775|421937 hsa-miR-1289 0 0 1
chr20:421775|421937 hsa-miR-769-3p 0 0 1
chr20:421775|421937 hsa-miR-450b-3p 0 0 1
chr20:421775|421937 hsa-miR-151-5p 0 0 1
chr20:421775|421937 hsa-miR-1254 0 0 1
chr20:421775|421937 hsa-miR-422a 1 0 0
chr20:421775|421937 hsa-miR-612 1 0 0
chr20:421775|421937 hsa-miR-637 1 0 0
chr20:421775|421937 hsa-miR-762 1 0 0
chr20:421775|421937 hsa-miR-1270 1 0 0
chr20:421775|421937 hsa-miR-2110 1 0 0
chr20:421775|421937 hsa-miR-2861 1 0 0
chr20:421775|421937 hsa-miR-3132 1 0 0
chr20:421775|421937 hsa-miR-3147 1 0 0
chr20:421775|421937 hsa-miR-3196 1 0 0
chr20:421775|421937 hsa-miR-378c 1 0 0
chr20:421775|421937 hsa-miR-4259 1 0 0
chr20:421775|421937 hsa-miR-378e 1 0 0
chr20:421775|421937 hsa-miR-4450 1 0 0
chr20:421775|421937 hsa-miR-378h 1 0 0
chr20:421775|421937 hsa-miR-4489 1 0 0
chr20:421775|421937 hsa-miR-2392 1 0 0
chr20:421775|421937 hsa-miR-4507 1 0 0
chr20:421775|421937 hsa-miR-4510 1 0 0
chr20:421775|421937 hsa-miR-4525 1 0 0
chr20:421775|421937 hsa-miR-378i 1 0 0
chr20:421775|421937 hsa-miR-4651 1 0 0
chr20:421775|421937 hsa-miR-4654 1 0 0
chr20:421775|421937 hsa-miR-4688 1 0 0
chr20:421775|421937 hsa-miR-4689 1 0 0
chr20:421775|421937 hsa-miR-4739 1 0 0
chr20:421775|421937 hsa-miR-5572 1 0 0
chr20:421775|421937 hsa-miR-6085 1 0 0
chr20:421775|421937 hsa-miR-6127 1 0 0
chr20:421775|421937 hsa-miR-6860 1 0 0
chr20:421775|421937 hsa-miR-8085 1 0 0
chr20:421775|421937 hsa-miR-8089 1 0 0
chr20:421775|421937 hsa-miR-4435 1 0 0
chr20:421775|421937 hsa-miR-92a-1-5p 1 0 0
chr20:421775|421937 hsa-miR-92a-2-5p 1 0 0
chr20:421775|421937 hsa-miR-4731-5p 1 0 0
chr20:421775|421937 hsa-miR-7155-5p 1 0 0
chr20:421775|421937 hsa-miR-6747-5p 1 0 0
chr20:421775|421937 hsa-miR-1287-5p 1 0 0
chr20:421775|421937 hsa-miR-671-5p 1 0 0
chr20:421775|421937 hsa-miR-3150a-3p 1 0 0
chr20:421775|421937 hsa-miR-6861-5p 1 0 0
chr20:421775|421937 hsa-miR-6825-5p 1 0 0
chr20:421775|421937 hsa-miR-6894-5p 1 0 0
chr20:421775|421937 hsa-miR-6857-5p 1 0 0
chr20:421775|421937 hsa-miR-4687-3p 1 0 0
chr20:421775|421937 hsa-miR-6799-5p 1 0 0
chr20:421775|421937 hsa-miR-6728-5p 1 0 0
chr20:421775|421937 hsa-miR-139-3p 1 0 0
chr20:421775|421937 hsa-miR-1227-5p 1 0 0
chr20:421775|421937 hsa-miR-6089 1 0 0
chr20:421775|421937 hsa-miR-6757-5p 1 0 0
chr20:421775|421937 hsa-miR-4695-5p 1 0 0
chr20:421775|421937 hsa-miR-4653-3p 1 0 0
chr20:421775|421937 hsa-miR-3677-5p 1 0 0
chr20:421775|421937 hsa-miR-6741-5p 1 0 0
chr20:421775|421937 hsa-miR-3622b-5p 1 0 0
chr20:421775|421937 hsa-miR-6806-5p 1 0 0
chr20:421775|421937 hsa-miR-197-5p 1 0 0
chr20:421775|421937 hsa-miR-8069 1 0 0
chr20:421775|421937 hsa-miR-6776-5p 1 0 0
chr20:421775|421937 hsa-miR-6742-5p 1 0 0
chr20:421775|421937 hsa-miR-6871-5p 1 0 0
chr20:421775|421937 hsa-miR-3151-5p 1 0 0
chr20:421775|421937 hsa-miR-6748-5p 1 0 0
chr20:421775|421937 hsa-miR-6793-5p 1 0 0
chr20:421775|421937 hsa-miR-6796-5p 1 0 0
chr20:421775|421937 hsa-miR-6829-5p 1 0 0
chr20:421775|421937 hsa-miR-6732-5p 1 0 0
chr20:421775|421937 hsa-miR-6810-5p 1 0 0
chr20:421775|421937 hsa-miR-6786-5p 1 0 0
chr20:421775|421937 hsa-miR-5088-5p 1 0 0
chr20:421775|421937 hsa-miR-6740-5p 1 0 0
chr20:421775|421937 hsa-miR-1229-5p 1 0 0
chr20:421775|421937 hsa-miR-193b-5p 1 0 0
chr20:421775|421937 hsa-miR-4640-5p 1 0 0
chr20:421775|421937 hsa-miR-3691-5p 1 0 0
chr20:421775|421937 hsa-miR-6749-5p 1 0 0
chr20:421775|421937 hsa-miR-4743-5p 1 0 0
chr20:421775|421937 hsa-miR-149-3p 1 0 0
chr20:421775|421937 hsa-miR-6717-5p 1 0 0
chr20:421775|421937 hsa-miR-6824-5p 1 0 0
chr20:421775|421937 hsa-miR-6789-5p 1 0 0
chr20:421775|421937 hsa-miR-1307-5p 1 0 0
chr20:421775|421937 hsa-miR-194-3p 1 0 0
chr20:421775|421937 hsa-miR-5010-5p 1 0 0
chr20:421775|421937 hsa-miR-4776-5p 1 0 0
chr20:421775|421937 hsa-miR-6895-5p 1 0 0
chr20:421775|421937 hsa-miR-3191-3p 1 0 0
chr20:421775|421937 hsa-miR-1225-5p 1 0 0
chr20:421775|421937 hsa-miR-1296-3p 1 0 0
chr20:421775|421937 hsa-miR-1207-5p 1 0 0
chr20:421775|421937 hsa-miR-1233-5p 1 0 0
chr20:421775|421937 hsa-miR-1273h-5p 1 0 0
chr20:421775|421937 hsa-miR-6769b-5p 1 0 0
chr20:421775|421937 hsa-miR-6778-5p 1 0 0
chr20:421775|421937 hsa-miR-6787-5p 1 0 0
chr20:421775|421937 hsa-miR-6812-5p 1 0 0
chr20:421775|421937 hsa-miR-6816-5p 1 0 0
chr20:421775|421937 hsa-miR-6870-5p 1 0 0
chr20:421775|421937 hsa-miR-1343-5p 1 0 0
chr20:421775|421937 hsa-miR-5001-5p 1 0 0
chr20:421775|421937 hsa-miR-6743-5p 1 0 0
chr20:421775|421937 hsa-miR-6752-5p 1 0 0
chr20:421775|421937 hsa-miR-6754-5p 1 0 0
chr20:421775|421937 hsa-miR-6756-5p 1 0 0
chr20:421775|421937 hsa-miR-6803-5p 1 0 0
chr20:421775|421937 hsa-miR-6813-5p 1 0 0
chr20:421775|421937 hsa-miR-7107-5p 1 0 0
chr20:421775|421937 hsa-miR-7110-5p 1 0 0
chr20:421775|421937 hsa-miR-6722-3p 1 0 0
chr20:421775|421937 hsa-miR-6751-5p 1 0 0
chr20:421775|421937 hsa-miR-6763-5p 1 0 0
chr20:421775|421937 hsa-miR-6779-5p 1 0 0
chr20:421775|421937 hsa-miR-6780a-5p 1 0 0
chr20:421775|421937 hsa-miR-3620-5p 1 0 0
chr20:421775|421937 hsa-miR-6836-5p 1 0 0
chr20:421775|421937 hsa-miR-1909-3p 1 0 0
chr20:421775|421937 hsa-miR-328-5p 1 0 0
chr20:421775|421937 hsa-miR-4726-5p 1 0 0
chr20:421775|421937 hsa-miR-4745-5p 1 0 0
chr20:421775|421937 hsa-miR-4749-5p 1 0 0
chr20:421775|421937 hsa-miR-6794-5p 1 0 0
chr20:421775|421937 hsa-miR-6795-5p 1 0 0
chr20:421775|421937 hsa-miR-6846-5p 1 0 0
chr20:421775|421937 hsa-miR-6848-5p 1 0 0
chr20:421775|421937 hsa-miR-6887-5p 1 0 0
chr20:421775|421937 hsa-miR-3187-5p 1 0 0
chr20:421775|421937 hsa-miR-4723-5p 1 0 0
chr20:421775|421937 hsa-miR-6845-5p 1 0 0
chr20:421775|421937 hsa-miR-4769-5p 1 0 0
chr20:421775|421937 hsa-miR-6731-5p 1 0 0
chr20:421775|421937 hsa-miR-6855-5p 1 0 0
chr20:421775|421937 hsa-miR-4646-5p 1 0 0
chr20:421775|421937 hsa-miR-378a-3p 1 0 0
chr20:421775|421937 hsa-miR-6766-5p 1 0 0
chr20:421775|421937 hsa-miR-3184-5p 1 0 0
chr20:421775|421937 hsa-miR-6791-5p 1 0 0
chr20:421775|421937 hsa-miR-6762-5p 1 0 0
chr20:421775|421937 hsa-miR-378d 1 0 0
chr20:421775|421937 hsa-miR-6506-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:421775|421937
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MILWSRPHIPHLGDSRSLLAGLPASIWPLESISEQQPCLPSDSHPTQNKSQL
Nucleotide Sequence CTGATTCTCTGGTCCAGGCCCCACATCCCCCACCTGGGTGACTCCAGGAGCCTCCTCGCTGGGCTCCCTGCATCCATCTGGCCCCTAGAGTCTATCTCAGAACAGCAGCCATGTCTCCCCAGTGACTCCCATCCTACCCAGAACAAATCCCAACTC
CircID chr20:421775|421937
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MFWVGWESLGRHGCCSEIDSRGQMDAGSPARRLLESPRWGMWGLDQRIRAA
Nucleotide Sequence TTGTTCTGGGTAGGATGGGAGTCACTGGGGAGACATGGCTGCTGTTCTGAGATAGACTCTAGGGGCCAGATGGATGCAGGGAGCCCAGCGAGGAGGCTCCTGGAGTCACCCAGGTGGGGGATGTGGGGCCTGGACCAGAGAATCAGAGCGGCA
CircID chr20:421775|421937
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MQGAQRGGSWSHPGGGCGAWTRESER
Nucleotide Sequence ATGCAGGGAGCCCAGCGAGGAGGCTCCTGGAGTCACCCAGGTGGGGGATGTGGGGCCTGGACCAGAGAATCAGAGCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab