CircRNA Information

General Information
circRNA Basic Information
CircID chr20:431186|431303
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGCCAACCCTAGATGCCTGCTGAGAGGTCAAAAGGGAGCAGGAGTGGCAAGACTTCCCCTCCCGCCCCTAAGCCCATCCTTCTCTGCAGACTTGACACACTGCACACTCCACCTGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:431186|431303 hsa-miR-192-5p 0 0 1
chr20:431186|431303 hsa-miR-192-3p 0 0 1
chr20:431186|431303 hsa-miR-204-5p 0 0 1
chr20:431186|431303 hsa-miR-204-3p 0 0 1
chr20:431186|431303 hsa-miR-211-5p 0 0 1
chr20:431186|431303 hsa-miR-211-3p 0 0 1
chr20:431186|431303 hsa-miR-214-5p 0 0 1
chr20:431186|431303 hsa-miR-214-3p 0 0 1
chr20:431186|431303 hsa-miR-215-5p 0 0 1
chr20:431186|431303 hsa-miR-215-3p 0 0 1
chr20:431186|431303 hsa-miR-122-5p 0 0 1
chr20:431186|431303 hsa-miR-122-3p 0 0 1
chr20:431186|431303 hsa-miR-370-5p 0 0 1
chr20:431186|431303 hsa-miR-370-3p 0 0 1
chr20:431186|431303 hsa-miR-431-5p 0 0 1
chr20:431186|431303 hsa-miR-431-3p 0 0 1
chr20:431186|431303 hsa-miR-552-5p 0 0 1
chr20:431186|431303 hsa-miR-552-3p 0 0 1
chr20:431186|431303 hsa-miR-592 0 0 1
chr20:431186|431303 hsa-miR-597-5p 0 0 1
chr20:431186|431303 hsa-miR-597-3p 0 0 1
chr20:431186|431303 hsa-miR-648 0 0 1
chr20:431186|431303 hsa-miR-1264 0 0 1
chr20:431186|431303 hsa-miR-922 0 0 1
chr20:431186|431303 hsa-miR-1205 0 0 1
chr20:431186|431303 hsa-miR-296-3p 0 0 1
chr20:431186|431303 hsa-miR-1184 0 0 1
chr20:431186|431303 hsa-miR-574-5p 1 1 1
chr20:431186|431303 hsa-miR-483-3p 0 1 1
chr20:431186|431303 hsa-miR-608 1 0 0
chr20:431186|431303 hsa-miR-1268a 1 0 0
chr20:431186|431303 hsa-miR-1976 0 1 0
chr20:431186|431303 hsa-miR-2861 1 0 0
chr20:431186|431303 hsa-miR-3141 1 0 0
chr20:431186|431303 hsa-miR-3196 1 1 0
chr20:431186|431303 hsa-miR-1268b 1 0 0
chr20:431186|431303 hsa-miR-4488 1 0 0
chr20:431186|431303 hsa-miR-2392 1 1 0
chr20:431186|431303 hsa-miR-1587 1 0 0
chr20:431186|431303 hsa-miR-4651 1 0 0
chr20:431186|431303 hsa-miR-4656 1 0 0
chr20:431186|431303 hsa-miR-5572 1 0 0
chr20:431186|431303 hsa-miR-5787 1 0 0
chr20:431186|431303 hsa-miR-12114 1 1 0
chr20:431186|431303 hsa-miR-143-5p 0 1 0
chr20:431186|431303 hsa-miR-27a-5p 0 1 0
chr20:431186|431303 hsa-miR-6728-5p 1 0 0
chr20:431186|431303 hsa-miR-7847-3p 1 0 0
chr20:431186|431303 hsa-miR-4722-5p 1 0 0
chr20:431186|431303 hsa-miR-6832-3p 0 1 0
chr20:431186|431303 hsa-miR-6782-5p 1 0 0
chr20:431186|431303 hsa-miR-4690-5p 0 1 0
chr20:431186|431303 hsa-miR-6821-3p 0 1 0
chr20:431186|431303 hsa-miR-3158-5p 0 1 0
chr20:431186|431303 hsa-miR-6743-3p 0 1 0
chr20:431186|431303 hsa-miR-6800-3p 0 1 0
chr20:431186|431303 hsa-miR-1207-5p 1 0 0
chr20:431186|431303 hsa-miR-6769b-5p 1 0 0
chr20:431186|431303 hsa-miR-6812-5p 1 0 0
chr20:431186|431303 hsa-miR-6816-5p 1 1 0
chr20:431186|431303 hsa-miR-6865-5p 1 0 0
chr20:431186|431303 hsa-miR-6752-5p 1 0 0
chr20:431186|431303 hsa-miR-6756-5p 1 1 0
chr20:431186|431303 hsa-miR-6819-5p 1 0 0
chr20:431186|431303 hsa-miR-7110-5p 1 0 0
chr20:431186|431303 hsa-miR-4685-3p 0 1 0
chr20:431186|431303 hsa-miR-3620-5p 1 0 0
chr20:431186|431303 hsa-miR-4728-5p 0 1 0
chr20:431186|431303 hsa-miR-5196-5p 1 0 0
chr20:431186|431303 hsa-miR-6780b-5p 0 1 0
chr20:431186|431303 hsa-miR-6846-5p 1 0 0
chr20:431186|431303 hsa-miR-6831-5p 1 0 0
chr20:431186|431303 hsa-miR-4769-5p 1 0 0
chr20:431186|431303 hsa-miR-3619-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:431186|431303
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MPAERSKGSRSGKTSPPAPKPILLCRLDTLHTPPV
Nucleotide Sequence ATGCCTGCTGAGAGGTCAAAAGGGAGCAGGAGTGGCAAGACTTCCCCTCCCGCCCCTAAGCCCATCCTTCTCTGCAGACTTGACACACTGCACACTCCACCTGTC
CircID chr20:431186|431303
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MLRGQKGAGVARLPLPPLSPSFSADLTHCTLHL
Nucleotide Sequence CTGCTGAGAGGTCAAAAGGGAGCAGGAGTGGCAAGACTTCCCCTCCCGCCCCTAAGCCCATCCTTCTCTGCAGACTTGACACACTGCACACTCCACCTG
CircID chr20:431186|431303
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MQRRMGLGAGGEVLPLLLPFDLSAGI
Nucleotide Sequence CTGCAGAGAAGGATGGGCTTAGGGGCGGGAGGGGAAGTCTTGCCACTCCTGCTCCCTTTTGACCTCTCAGCAGGCATCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab