CircRNA Information

General Information
circRNA Basic Information
CircID chr20:44498788|44498897
Strand -
CircType exon
Host Gene ENSG00000132824.12;
Algorism CIRI2;
Sequence CCTCAACATAAGGTCCAAACTCTTTACTGAGGTTGATAAAGCCCTTTAAAATTCAGTCCCTGACTACATTTCCCCATTCCAGCTTTACTGAACTTTTTTTCCCCATCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:44498788|44498897 hsa-miR-206 1 0 1
chr20:44498788|44498897 hsa-miR-320a-5p 0 0 1
chr20:44498788|44498897 hsa-miR-320a-3p 0 0 1
chr20:44498788|44498897 hsa-miR-492 0 0 1
chr20:44498788|44498897 hsa-miR-583 0 0 1
chr20:44498788|44498897 hsa-miR-613 0 0 1
chr20:44498788|44498897 hsa-miR-1276 0 0 1
chr20:44498788|44498897 hsa-miR-320b 1 0 1
chr20:44498788|44498897 hsa-miR-320c 1 0 1
chr20:44498788|44498897 hsa-miR-320d 0 0 1
chr20:44498788|44498897 hsa-miR-590-3p 0 0 1
chr20:44498788|44498897 hsa-miR-1 0 0 1
chr20:44498788|44498897 hsa-miR-762 1 0 0
chr20:44498788|44498897 hsa-miR-921 1 0 0
chr20:44498788|44498897 hsa-miR-1299 1 0 0
chr20:44498788|44498897 hsa-miR-2110 1 0 0
chr20:44498788|44498897 hsa-miR-3131 1 0 0
chr20:44498788|44498897 hsa-miR-3138 1 0 0
chr20:44498788|44498897 hsa-miR-3153 1 0 0
chr20:44498788|44498897 hsa-miR-3175 1 0 0
chr20:44498788|44498897 hsa-miR-4270 1 0 0
chr20:44498788|44498897 hsa-miR-4271 1 0 0
chr20:44498788|44498897 hsa-miR-4430 1 0 0
chr20:44498788|44498897 hsa-miR-4487 1 0 0
chr20:44498788|44498897 hsa-miR-2392 1 0 0
chr20:44498788|44498897 hsa-miR-4507 1 0 0
chr20:44498788|44498897 hsa-miR-4656 1 0 0
chr20:44498788|44498897 hsa-miR-4689 1 0 0
chr20:44498788|44498897 hsa-miR-4784 1 0 0
chr20:44498788|44498897 hsa-miR-6088 1 0 0
chr20:44498788|44498897 hsa-miR-8052 1 0 0
chr20:44498788|44498897 hsa-miR-12128 1 0 0
chr20:44498788|44498897 hsa-miR-211-3p 1 0 0
chr20:44498788|44498897 hsa-miR-4433b-3p 1 0 0
chr20:44498788|44498897 hsa-miR-4433a-3p 1 0 0
chr20:44498788|44498897 hsa-miR-3150a-3p 1 0 0
chr20:44498788|44498897 hsa-miR-6857-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6728-5p 1 0 0
chr20:44498788|44498897 hsa-miR-5187-5p 1 0 0
chr20:44498788|44498897 hsa-miR-3192-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6757-5p 1 0 0
chr20:44498788|44498897 hsa-miR-3622b-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6716-5p 1 0 0
chr20:44498788|44498897 hsa-miR-3151-5p 1 0 0
chr20:44498788|44498897 hsa-miR-204-3p 1 0 0
chr20:44498788|44498897 hsa-miR-4740-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6812-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6870-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6754-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6813-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6763-5p 1 0 0
chr20:44498788|44498897 hsa-miR-3620-5p 1 0 0
chr20:44498788|44498897 hsa-miR-5196-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6780b-5p 1 0 0
chr20:44498788|44498897 hsa-miR-1909-3p 1 0 0
chr20:44498788|44498897 hsa-miR-4725-3p 1 0 0
chr20:44498788|44498897 hsa-miR-4745-5p 1 0 0
chr20:44498788|44498897 hsa-miR-4749-5p 1 0 0
chr20:44498788|44498897 hsa-miR-939-5p 1 0 0
chr20:44498788|44498897 hsa-miR-3199 1 0 0
chr20:44498788|44498897 hsa-miR-4758-5p 1 0 0
chr20:44498788|44498897 hsa-miR-4769-5p 1 0 0
chr20:44498788|44498897 hsa-miR-3940-5p 1 0 0
chr20:44498788|44498897 hsa-miR-3116 1 0 0
chr20:44498788|44498897 hsa-miR-4646-5p 1 0 0
chr20:44498788|44498897 hsa-miR-6718-5p 1 0 0
chr20:44498788|44498897 hsa-miR-34c-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:44498788|44498897
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MRLIKPFKIQSLTTFPHSSFTELFFPIF
Nucleotide Sequence CTGAGGTTGATAAAGCCCTTTAAAATTCAGTCCCTGACTACATTTCCCCATTCCAGCTTTACTGAACTTTTTTTCCCCATCTTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab