CircRNA Information

General Information
circRNA Basic Information
CircID chr20:45325437|45325616
Strand -
CircType exon
Host Gene ENSG00000124145.6;
Algorism CIRI2;
Sequence CCTGGGTTGCAGTGGTGACGGGAGCTAATGGCCACTGGTGCAGCAAGGGAGGGTGGTTCCCCTCACCGCAGCCACTGGGGTCAGGAGGAGACACGACCTGCCCAGGCTAAGCCACCAGGCCTCCCCTCTCAGGAGAGGGAGGGTCCCAGACAACAGGCCCCAGCTGGGGCCTCATCAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:45325437|45325616 hsa-miR-197-5p 0 0 1
chr20:45325437|45325616 hsa-miR-197-3p 0 0 1
chr20:45325437|45325616 hsa-miR-187-5p 0 0 1
chr20:45325437|45325616 hsa-miR-187-3p 0 0 1
chr20:45325437|45325616 hsa-miR-596 0 0 1
chr20:45325437|45325616 hsa-miR-604 0 0 1
chr20:45325437|45325616 hsa-miR-612 1 0 1
chr20:45325437|45325616 hsa-miR-623 1 0 1
chr20:45325437|45325616 hsa-miR-632 0 0 1
chr20:45325437|45325616 hsa-miR-647 0 0 1
chr20:45325437|45325616 hsa-miR-661 0 0 1
chr20:45325437|45325616 hsa-miR-1231 0 0 1
chr20:45325437|45325616 hsa-miR-1200 0 0 1
chr20:45325437|45325616 hsa-miR-1247-5p 0 0 1
chr20:45325437|45325616 hsa-miR-1247-3p 0 0 1
chr20:45325437|45325616 hsa-miR-767-5p 0 0 1
chr20:45325437|45325616 hsa-miR-423-5p 0 0 1
chr20:45325437|45325616 hsa-miR-1207-3p 0 0 1
chr20:45325437|45325616 hsa-miR-220b 0 0 1
chr20:45325437|45325616 hsa-miR-642 0 0 1
chr20:45325437|45325616 hsa-miR-1285 0 0 1
chr20:45325437|45325616 hsa-miR-326 0 1 0
chr20:45325437|45325616 hsa-miR-762 1 0 0
chr20:45325437|45325616 hsa-miR-1470 1 0 0
chr20:45325437|45325616 hsa-miR-2861 0 1 0
chr20:45325437|45325616 hsa-miR-4279 0 1 0
chr20:45325437|45325616 hsa-miR-4287 1 1 0
chr20:45325437|45325616 hsa-miR-4456 0 1 0
chr20:45325437|45325616 hsa-miR-4469 1 0 0
chr20:45325437|45325616 hsa-miR-4502 0 1 0
chr20:45325437|45325616 hsa-miR-5693 0 1 0
chr20:45325437|45325616 hsa-miR-5787 1 0 0
chr20:45325437|45325616 hsa-miR-6860 1 1 0
chr20:45325437|45325616 hsa-miR-6749-3p 1 1 0
chr20:45325437|45325616 hsa-miR-6747-3p 1 0 0
chr20:45325437|45325616 hsa-miR-6861-5p 1 1 0
chr20:45325437|45325616 hsa-miR-6825-5p 0 1 0
chr20:45325437|45325616 hsa-miR-6089 1 0 0
chr20:45325437|45325616 hsa-miR-3677-5p 0 1 0
chr20:45325437|45325616 hsa-miR-1915-5p 1 0 0
chr20:45325437|45325616 hsa-miR-6783-5p 0 1 0
chr20:45325437|45325616 hsa-miR-3130-3p 0 1 0
chr20:45325437|45325616 hsa-miR-7855-5p 0 1 0
chr20:45325437|45325616 hsa-miR-5008-5p 0 1 0
chr20:45325437|45325616 hsa-miR-6735-3p 0 1 0
chr20:45325437|45325616 hsa-miR-5010-3p 1 0 0
chr20:45325437|45325616 hsa-miR-7113-3p 1 0 0
chr20:45325437|45325616 hsa-miR-3667-3p 0 1 0
chr20:45325437|45325616 hsa-miR-4667-3p 1 0 0
chr20:45325437|45325616 hsa-miR-378a-5p 0 1 0
chr20:45325437|45325616 hsa-miR-6776-3p 0 1 0
chr20:45325437|45325616 hsa-miR-660-3p 0 1 0
chr20:45325437|45325616 hsa-miR-6865-3p 0 1 0
chr20:45325437|45325616 hsa-miR-4639-3p 0 1 0
chr20:45325437|45325616 hsa-miR-642a-5p 0 1 0
chr20:45325437|45325616 hsa-miR-1207-5p 1 0 0
chr20:45325437|45325616 hsa-miR-4763-3p 1 0 0
chr20:45325437|45325616 hsa-miR-6756-5p 1 0 0
chr20:45325437|45325616 hsa-miR-4685-3p 1 1 0
chr20:45325437|45325616 hsa-miR-3187-5p 1 1 0
chr20:45325437|45325616 hsa-miR-324-3p 0 1 0
chr20:45325437|45325616 hsa-miR-6756-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr20:45325437|45325616
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MATGAAREGGSPHRSHWGQEETRPAQAKPPGLPSQEREGPRQQAPAGASSA
Nucleotide Sequence ATGGCCACTGGTGCAGCAAGGGAGGGTGGTTCCCCTCACCGCAGCCACTGGGGTCAGGAGGAGACACGACCTGCCCAGGCTAAGCCACCAGGCCTCCCCTCTCAGGAGAGGGAGGGTCCCAGACAACAGGCCCCAGCTGGGGCCTCATCAGCC

CircID chr20:45325437|45325616
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MVQQGRVVPLTAATGVRRRHDLPRLSHQASPLRRGRVPDNRPQLGPHQ
Nucleotide Sequence CTGGTGCAGCAAGGGAGGGTGGTTCCCCTCACCGCAGCCACTGGGGTCAGGAGGAGACACGACCTGCCCAGGCTAAGCCACCAGGCCTCCCCTCTCAGGAGAGGGAGGGTCCCAGACAACAGGCCCCAGCTGGGGCCTCATCAG

CircID chr20:45325437|45325616
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MLSGTLPLLRGEAWWLSLGRSCLLLTPVAAVRGTTLPCCTSGH
Nucleotide Sequence CTGTTGTCTGGGACCCTCCCTCTCCTGAGAGGGGAGGCCTGGTGGCTTAGCCTGGGCAGGTCGTGTCTCCTCCTGACCCCAGTGGCTGCGGTGAGGGGAACCACCCTCCCTTGCTGCACCAGTGGCCATTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites