CircRNA Information

General Information
circRNA Basic Information
CircID chr20:45326025|45326184
Strand -
CircType exon
Host Gene ENSG00000124145.6;
Algorism CIRI2;
Sequence CCACCCAGCCACATGAAAATTCACTCACTCAACCACCCAGCAACATCAAACTGGAAACACCACACTATTTCCTGAAAAAAATATATTTATCTATTTTTCTAGAACCAAGGAAGAATAATAATATATTATAAGAACACAGACACAAATATCCCACCATCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:45326025|45326184 hsa-miR-374a-5p 0 0 1
chr20:45326025|45326184 hsa-miR-374a-3p 0 0 1
chr20:45326025|45326184 hsa-miR-563 0 0 1
chr20:45326025|45326184 hsa-miR-577 0 0 1
chr20:45326025|45326184 hsa-miR-592 0 0 1
chr20:45326025|45326184 hsa-miR-599 0 0 1
chr20:45326025|45326184 hsa-miR-648 0 0 1
chr20:45326025|45326184 hsa-miR-656-5p 0 0 1
chr20:45326025|45326184 hsa-miR-656-3p 0 0 1
chr20:45326025|45326184 hsa-miR-659-5p 0 0 1
chr20:45326025|45326184 hsa-miR-659-3p 0 0 1
chr20:45326025|45326184 hsa-miR-541-5p 0 0 1
chr20:45326025|45326184 hsa-miR-541-3p 0 0 1
chr20:45326025|45326184 hsa-miR-873-5p 0 0 1
chr20:45326025|45326184 hsa-miR-873-3p 0 0 1
chr20:45326025|45326184 hsa-miR-374b-5p 0 0 1
chr20:45326025|45326184 hsa-miR-374b-3p 0 0 1
chr20:45326025|45326184 hsa-miR-1293 1 0 1
chr20:45326025|45326184 hsa-miR-145-5p 0 0 1
chr20:45326025|45326184 hsa-miR-654-5p 1 0 1
chr20:45326025|45326184 hsa-miR-502-5p 0 0 1
chr20:45326025|45326184 hsa-miR-876-3p 0 0 1
chr20:45326025|45326184 hsa-miR-518d-5p 0 0 1
chr20:45326025|45326184 hsa-miR-519b-5p 0 0 1
chr20:45326025|45326184 hsa-miR-519c-5p 0 0 1
chr20:45326025|45326184 hsa-miR-520c-5p 0 0 1
chr20:45326025|45326184 hsa-miR-369-3p 0 0 1
chr20:45326025|45326184 hsa-miR-526a 0 0 1
chr20:45326025|45326184 hsa-miR-608 1 0 0
chr20:45326025|45326184 hsa-miR-4259 1 0 0
chr20:45326025|45326184 hsa-miR-3689c 1 0 0
chr20:45326025|45326184 hsa-miR-4481 1 0 0
chr20:45326025|45326184 hsa-miR-5192 1 0 0
chr20:45326025|45326184 hsa-miR-5698 1 0 0
chr20:45326025|45326184 hsa-miR-6127 1 0 0
chr20:45326025|45326184 hsa-miR-6130 1 0 0
chr20:45326025|45326184 hsa-miR-6745 1 0 0
chr20:45326025|45326184 hsa-miR-105-3p 1 0 0
chr20:45326025|45326184 hsa-miR-92a-2-5p 1 0 0
chr20:45326025|45326184 hsa-miR-4731-5p 1 0 0
chr20:45326025|45326184 hsa-miR-1236-5p 1 0 0
chr20:45326025|45326184 hsa-miR-3192-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6741-5p 1 0 0
chr20:45326025|45326184 hsa-miR-4474-3p 1 0 0
chr20:45326025|45326184 hsa-miR-8069 1 0 0
chr20:45326025|45326184 hsa-miR-5589-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6776-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6742-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6748-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6796-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6821-5p 1 0 0
chr20:45326025|45326184 hsa-miR-937-5p 1 0 0
chr20:45326025|45326184 hsa-miR-574-5p 1 0 0
chr20:45326025|45326184 hsa-miR-409-3p 1 0 0
chr20:45326025|45326184 hsa-miR-3689b-3p 1 0 0
chr20:45326025|45326184 hsa-miR-6769b-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6812-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6737-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6756-5p 1 0 0
chr20:45326025|45326184 hsa-miR-3689a-3p 1 0 0
chr20:45326025|45326184 hsa-miR-4701-3p 1 0 0
chr20:45326025|45326184 hsa-miR-4758-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6736-5p 1 0 0
chr20:45326025|45326184 hsa-miR-6790-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:45326025|45326184
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence METPHYFLKKIYLSIFLEPRKNNNIL
Nucleotide Sequence CTGGAAACACCACACTATTTCCTGAAAAAAATATATTTATCTATTTTTCTAGAACCAAGGAAGAATAATAATATATTATAA
CircID chr20:45326025|45326184
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MVGYLCLCSYNILLFFLGSRKIDKYIFFRK
Nucleotide Sequence ATGGTGGGATATTTGTGTCTGTGTTCTTATAATATATTATTATTCTTCCTTGGTTCTAGAAAAATAGATAAATATATTTTTTTCAGGAAATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab