CircRNA Information

General Information
circRNA Basic Information
CircID chr20:45420332|45420578
Strand +
CircType exon
Host Gene ENSG00000124155.15;
Algorism CIRI2;
Sequence GTCCTGATATGTAGTGGTCGGGGGTGGGTGCACCTCTAATGTCTCGTTGTCCTGGGGACACAAAGGCAGGGCTAAGAAGCAAGCAGAGAGGGTAGGCTGGTCCTGGGGACCAGCGGTGTGTTTGTGTGTGTGGCTGGAGACCTTGTTACCTGGTTGTAGGTGGTGATGTCCACATAGACTCGGCTCTCTGAAGCCAGGGGGCAGGGCTCCGTGAGGGTTCGGGAGAACATCCGGAAGAGGGACCAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:45420332|45420578 hsa-miR-197-5p 0 0 1
chr20:45420332|45420578 hsa-miR-197-3p 0 0 1
chr20:45420332|45420578 hsa-miR-592 0 0 1
chr20:45420332|45420578 hsa-miR-599 0 0 1
chr20:45420332|45420578 hsa-miR-624-5p 0 0 1
chr20:45420332|45420578 hsa-miR-624-3p 0 0 1
chr20:45420332|45420578 hsa-miR-766-5p 0 0 1
chr20:45420332|45420578 hsa-miR-766-3p 0 0 1
chr20:45420332|45420578 hsa-miR-877-5p 0 0 1
chr20:45420332|45420578 hsa-miR-877-3p 0 0 1
chr20:45420332|45420578 hsa-miR-1236-5p 0 0 1
chr20:45420332|45420578 hsa-miR-1236-3p 0 0 1
chr20:45420332|45420578 hsa-miR-299-3p 0 0 1
chr20:45420332|45420578 hsa-miR-331-3p 0 0 1
chr20:45420332|45420578 hsa-miR-324-3p 0 0 1
chr20:45420332|45420578 hsa-miR-362-3p 0 0 1
chr20:45420332|45420578 hsa-miR-220b 0 0 1
chr20:45420332|45420578 hsa-miR-1233 0 0 1
chr20:45420332|45420578 hsa-miR-642 0 0 1
chr20:45420332|45420578 hsa-miR-129-3p 0 0 1
chr20:45420332|45420578 hsa-miR-329 0 0 1
chr20:45420332|45420578 hsa-miR-220a 0 0 1
chr20:45420332|45420578 hsa-miR-499-3p 0 0 1
chr20:45420332|45420578 hsa-miR-133b 0 1 0
chr20:45420332|45420578 hsa-miR-596 1 0 0
chr20:45420332|45420578 hsa-miR-1913 1 1 0
chr20:45420332|45420578 hsa-miR-4313 0 1 0
chr20:45420332|45420578 hsa-miR-3943 0 1 0
chr20:45420332|45420578 hsa-miR-4436a 0 1 0
chr20:45420332|45420578 hsa-miR-4540 0 1 0
chr20:45420332|45420578 hsa-miR-8485 0 1 0
chr20:45420332|45420578 hsa-miR-103a-2-5p 0 1 0
chr20:45420332|45420578 hsa-miR-6840-3p 0 1 0
chr20:45420332|45420578 hsa-miR-1247-3p 0 1 0
chr20:45420332|45420578 hsa-miR-6747-3p 0 1 0
chr20:45420332|45420578 hsa-miR-4726-3p 1 0 0
chr20:45420332|45420578 hsa-miR-6720-5p 1 0 0
chr20:45420332|45420578 hsa-miR-1233-3p 0 1 0
chr20:45420332|45420578 hsa-miR-6875-3p 1 0 0
chr20:45420332|45420578 hsa-miR-1915-5p 0 1 0
chr20:45420332|45420578 hsa-miR-6728-3p 0 1 0
chr20:45420332|45420578 hsa-miR-4763-5p 1 0 0
chr20:45420332|45420578 hsa-miR-6894-3p 1 0 0
chr20:45420332|45420578 hsa-miR-4691-3p 0 1 0
chr20:45420332|45420578 hsa-miR-5010-3p 0 1 0
chr20:45420332|45420578 hsa-miR-7111-3p 1 0 0
chr20:45420332|45420578 hsa-miR-339-5p 1 0 0
chr20:45420332|45420578 hsa-miR-7152-3p 0 1 0
chr20:45420332|45420578 hsa-miR-6752-3p 0 1 0
chr20:45420332|45420578 hsa-miR-6782-3p 1 1 0
chr20:45420332|45420578 hsa-miR-7848-3p 0 1 0
chr20:45420332|45420578 hsa-miR-2355-5p 0 1 0
chr20:45420332|45420578 hsa-miR-3173-5p 0 1 0
chr20:45420332|45420578 hsa-miR-1287-3p 0 1 0
chr20:45420332|45420578 hsa-miR-6779-3p 0 1 0
chr20:45420332|45420578 hsa-miR-6838-3p 0 1 0
chr20:45420332|45420578 hsa-miR-642a-5p 0 1 0
chr20:45420332|45420578 hsa-miR-133a-3p 0 1 0
chr20:45420332|45420578 hsa-miR-3127-3p 1 0 0
chr20:45420332|45420578 hsa-miR-320a-5p 0 1 0
chr20:45420332|45420578 hsa-miR-1915-3p 0 1 0
chr20:45420332|45420578 hsa-miR-10396a-3p 1 0 0
chr20:45420332|45420578 hsa-miR-10396b-3p 1 0 0
chr20:45420332|45420578 hsa-miR-6799-3p 1 1 0
chr20:45420332|45420578 hsa-miR-6810-3p 0 1 0
chr20:45420332|45420578 hsa-miR-6775-3p 1 1 0
chr20:45420332|45420578 hsa-miR-3059-5p 1 0 0
chr20:45420332|45420578 hsa-miR-4723-3p 1 1 0
chr20:45420332|45420578 hsa-miR-7114-3p 1 1 0
chr20:45420332|45420578 hsa-miR-103a-1-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr20:45420332|45420578
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MSWGHKGRAKKQAERVGWSWGPAVCLCVWLETLLPGCRW
Nucleotide Sequence TTGTCCTGGGGACACAAAGGCAGGGCTAAGAAGCAAGCAGAGAGGGTAGGCTGGTCCTGGGGACCAGCGGTGTGTTTGTGTGTGTGGCTGGAGACCTTGTTACCTGGTTGTAGGTGGTGA

CircID chr20:45420332|45420578
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MLLSPAFVSPGQRDIRGAPTPDHYISG
Nucleotide Sequence TTGCTTCTTAGCCCTGCCTTTGTGTCCCCAGGACAACGAGACATTAGAGGTGCACCCACCCCCGACCACTACATATCAGGA

CircID chr20:45420332|45420578
ORF Type ORF3
Protein Length 82
Nucleotide Length 246
Protein Sequence LVPLPDVLPNPHGALPPGFREPSLCGHHHLQPGNKVSSHTHKHTAGPQDQPTLSACFLALPLCPQDNETLEVHPPPTTTYQD
Nucleotide Sequence CTGGTCCCTCTTCCGGATGTTCTCCCGAACCCTCACGGAGCCCTGCCCCCTGGCTTCAGAGAGCCGAGTCTATGTGGACATCACCACCTACAACCAGGTAACAAGGTCTCCAGCCACACACACAAACACACCGCTGGTCCCCAGGACCAGCCTACCCTCTCTGCTTGCTTCTTAGCCCTGCCTTTGTGTCCCCAGGACAACGAGACATTAGAGGTGCACCCACCCCCGACCACTACATATCAGGAC

CircID chr20:45420332|45420578
ORF Type ORF4
Protein Length 52
Nucleotide Length 159
Protein Sequence MFSRTLTEPCPLASESRVYVDITTYNQVTRSPATHTNTPLVPRTSLPSLLAS
Nucleotide Sequence ATGTTCTCCCGAACCCTCACGGAGCCCTGCCCCCTGGCTTCAGAGAGCCGAGTCTATGTGGACATCACCACCTACAACCAGGTAACAAGGTCTCCAGCCACACACACAAACACACCGCTGGTCCCCAGGACCAGCCTACCCTCTCTGCTTGCTTCTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites