CircRNA Information

General Information
circRNA Basic Information
CircID chr20:45952359|45952516
Strand +
CircType exon
Host Gene ENSG00000198026.7;
Algorism CIRI2;
Sequence CGCAGATGGCTCCATCTCCTTCCCAAGTCCAGATGCTCTGGCCTCTGGTGCCAAATGGCCCCTGCTGCAGTGTGGGGGACTGCCCAGAGACGGCCCTGAGCCCCCATCTCCAGCCAAGACCCACTGCGTAGGGGACTCCCAGAGCTCTGCCTCCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:45952359|45952516 hsa-miR-96-5p 0 0 1
chr20:45952359|45952516 hsa-miR-96-3p 0 0 1
chr20:45952359|45952516 hsa-miR-107 0 0 1
chr20:45952359|45952516 hsa-miR-182-5p 0 0 1
chr20:45952359|45952516 hsa-miR-182-3p 0 0 1
chr20:45952359|45952516 hsa-miR-214-5p 0 0 1
chr20:45952359|45952516 hsa-miR-214-3p 0 0 1
chr20:45952359|45952516 hsa-miR-326 0 1 1
chr20:45952359|45952516 hsa-miR-422a 1 1 1
chr20:45952359|45952516 hsa-miR-593-5p 0 0 1
chr20:45952359|45952516 hsa-miR-593-3p 0 0 1
chr20:45952359|45952516 hsa-miR-612 0 1 1
chr20:45952359|45952516 hsa-miR-620 0 0 1
chr20:45952359|45952516 hsa-miR-647 0 0 1
chr20:45952359|45952516 hsa-miR-650 1 1 1
chr20:45952359|45952516 hsa-miR-1271-5p 0 0 1
chr20:45952359|45952516 hsa-miR-1271-3p 0 0 1
chr20:45952359|45952516 hsa-miR-1266-5p 0 0 1
chr20:45952359|45952516 hsa-miR-1266-3p 0 0 1
chr20:45952359|45952516 hsa-miR-1270 0 1 1
chr20:45952359|45952516 hsa-miR-1827 0 0 1
chr20:45952359|45952516 hsa-miR-193a-5p 0 1 1
chr20:45952359|45952516 hsa-miR-1184 0 0 1
chr20:45952359|45952516 hsa-miR-1289 0 0 1
chr20:45952359|45952516 hsa-miR-361-3p 0 0 1
chr20:45952359|45952516 hsa-miR-330-5p 0 1 1
chr20:45952359|45952516 hsa-miR-509-3-5p 0 1 1
chr20:45952359|45952516 hsa-miR-509-5p 0 1 1
chr20:45952359|45952516 hsa-miR-103 0 0 1
chr20:45952359|45952516 hsa-miR-378 0 0 1
chr20:45952359|45952516 hsa-miR-1285 0 0 1
chr20:45952359|45952516 hsa-miR-24 0 0 1
chr20:45952359|45952516 hsa-miR-637 1 0 0
chr20:45952359|45952516 hsa-miR-762 1 0 0
chr20:45952359|45952516 hsa-miR-761 0 1 0
chr20:45952359|45952516 hsa-miR-1182 0 1 0
chr20:45952359|45952516 hsa-miR-378b 1 1 0
chr20:45952359|45952516 hsa-miR-3154 1 0 0
chr20:45952359|45952516 hsa-miR-378c 1 1 0
chr20:45952359|45952516 hsa-miR-4265 1 0 0
chr20:45952359|45952516 hsa-miR-3652 1 1 0
chr20:45952359|45952516 hsa-miR-1268b 1 0 0
chr20:45952359|45952516 hsa-miR-378e 1 1 0
chr20:45952359|45952516 hsa-miR-378f 1 1 0
chr20:45952359|45952516 hsa-miR-4428 0 1 0
chr20:45952359|45952516 hsa-miR-4430 0 1 0
chr20:45952359|45952516 hsa-miR-4437 0 1 0
chr20:45952359|45952516 hsa-miR-378h 1 1 0
chr20:45952359|45952516 hsa-miR-4518 0 1 0
chr20:45952359|45952516 hsa-miR-4533 1 1 0
chr20:45952359|45952516 hsa-miR-378i 0 1 0
chr20:45952359|45952516 hsa-miR-4656 1 0 0
chr20:45952359|45952516 hsa-miR-4689 1 1 0
chr20:45952359|45952516 hsa-miR-4739 1 0 0
chr20:45952359|45952516 hsa-miR-4741 1 0 0
chr20:45952359|45952516 hsa-miR-5787 1 0 0
chr20:45952359|45952516 hsa-miR-6068 1 0 0
chr20:45952359|45952516 hsa-miR-378j 1 0 0
chr20:45952359|45952516 hsa-miR-8089 1 1 0
chr20:45952359|45952516 hsa-miR-12126 0 1 0
chr20:45952359|45952516 hsa-miR-6765-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6825-5p 1 1 0
chr20:45952359|45952516 hsa-miR-6857-5p 0 1 0
chr20:45952359|45952516 hsa-miR-6799-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6089 1 0 0
chr20:45952359|45952516 hsa-miR-3192-5p 0 1 0
chr20:45952359|45952516 hsa-miR-6757-5p 1 0 0
chr20:45952359|45952516 hsa-miR-4695-5p 1 1 0
chr20:45952359|45952516 hsa-miR-4709-3p 1 0 0
chr20:45952359|45952516 hsa-miR-6820-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6842-3p 1 0 0
chr20:45952359|45952516 hsa-miR-197-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6716-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6793-5p 1 1 0
chr20:45952359|45952516 hsa-miR-185-3p 1 0 0
chr20:45952359|45952516 hsa-miR-6805-5p 1 0 0
chr20:45952359|45952516 hsa-miR-5006-5p 1 0 0
chr20:45952359|45952516 hsa-miR-615-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6786-5p 1 0 0
chr20:45952359|45952516 hsa-miR-5088-5p 1 1 0
chr20:45952359|45952516 hsa-miR-4786-3p 1 0 0
chr20:45952359|45952516 hsa-miR-4640-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6753-5p 0 1 0
chr20:45952359|45952516 hsa-miR-3127-5p 1 1 0
chr20:45952359|45952516 hsa-miR-6771-5p 1 0 0
chr20:45952359|45952516 hsa-miR-3191-5p 0 1 0
chr20:45952359|45952516 hsa-miR-4743-5p 1 0 0
chr20:45952359|45952516 hsa-miR-149-3p 1 0 0
chr20:45952359|45952516 hsa-miR-6824-5p 1 0 0
chr20:45952359|45952516 hsa-miR-194-3p 0 1 0
chr20:45952359|45952516 hsa-miR-4707-5p 1 0 0
chr20:45952359|45952516 hsa-miR-4283 0 1 0
chr20:45952359|45952516 hsa-miR-10400-5p 1 0 0
chr20:45952359|45952516 hsa-miR-4763-3p 1 0 0
chr20:45952359|45952516 hsa-miR-6865-5p 1 0 0
chr20:45952359|45952516 hsa-miR-5001-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6737-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6743-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6756-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6803-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6819-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6851-5p 1 0 0
chr20:45952359|45952516 hsa-miR-1249-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6722-3p 1 1 0
chr20:45952359|45952516 hsa-miR-6751-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6763-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6774-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6780a-5p 1 0 0
chr20:45952359|45952516 hsa-miR-7111-5p 1 0 0
chr20:45952359|45952516 hsa-miR-3620-5p 1 0 0
chr20:45952359|45952516 hsa-miR-4728-5p 1 0 0
chr20:45952359|45952516 hsa-miR-5196-5p 1 1 0
chr20:45952359|45952516 hsa-miR-6836-5p 1 0 0
chr20:45952359|45952516 hsa-miR-1237-5p 1 0 0
chr20:45952359|45952516 hsa-miR-1909-3p 1 1 0
chr20:45952359|45952516 hsa-miR-4685-5p 1 1 0
chr20:45952359|45952516 hsa-miR-4726-5p 1 1 0
chr20:45952359|45952516 hsa-miR-4749-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6846-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6848-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6858-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6845-5p 1 1 0
chr20:45952359|45952516 hsa-miR-4758-5p 1 0 0
chr20:45952359|45952516 hsa-miR-3940-5p 1 0 0
chr20:45952359|45952516 hsa-miR-1914-3p 1 0 0
chr20:45952359|45952516 hsa-miR-6855-5p 1 0 0
chr20:45952359|45952516 hsa-miR-4747-5p 1 1 0
chr20:45952359|45952516 hsa-miR-378a-3p 1 1 0
chr20:45952359|45952516 hsa-miR-6762-5p 1 1 0
chr20:45952359|45952516 hsa-miR-4756-5p 1 0 0
chr20:45952359|45952516 hsa-miR-6827-3p 0 1 0
chr20:45952359|45952516 hsa-miR-378d 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr20:45952359|45952516
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MASGAKWPLLQCGGLPRDGPEPPSPAKTHCVGDSQSSASS
Nucleotide Sequence CTGGCCTCTGGTGCCAAATGGCCCCTGCTGCAGTGTGGGGGACTGCCCAGAGACGGCCCTGAGCCCCCATCTCCAGCCAAGACCCACTGCGTAGGGGACTCCCAGAGCTCTGCCTCCTCA

CircID chr20:45952359|45952516
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MAPSPSQVQMLWPLVPNGPCCSVGDCPETALSPHLQPRPTA
Nucleotide Sequence ATGGCTCCATCTCCTTCCCAAGTCCAGATGCTCTGGCCTCTGGTGCCAAATGGCCCCTGCTGCAGTGTGGGGGACTGCCCAGAGACGGCCCTGAGCCCCCATCTCCAGCCAAGACCCACTGCGTAG

CircID chr20:45952359|45952516
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MEMGAQGRLWAVPHTAAGAIWHQRPEHLDLGRRWSHL
Nucleotide Sequence CTGGAGATGGGGGCTCAGGGCCGTCTCTGGGCAGTCCCCCACACTGCAGCAGGGGCCATTTGGCACCAGAGGCCAGAGCATCTGGACTTGGGAAGGAGATGGAGCCATCTG

CircID chr20:45952359|45952516
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MGVPYAVGLGWRWGLRAVSGQSPTLQQGPFGTRGQSIWTWEGDGAIC
Nucleotide Sequence CTGGGAGTCCCCTACGCAGTGGGTCTTGGCTGGAGATGGGGGCTCAGGGCCGTCTCTGGGCAGTCCCCCACACTGCAGCAGGGGCCATTTGGCACCAGAGGCCAGAGCATCTGGACTTGGGAAGGAGATGGAGCCATCTGC

CircID chr20:45952359|45952516
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MAGDGGSGPSLGSPPHCSRGHLAPEARASGLGKEMEPSA
Nucleotide Sequence TTGGCTGGAGATGGGGGCTCAGGGCCGTCTCTGGGCAGTCCCCCACACTGCAGCAGGGGCCATTTGGCACCAGAGGCCAGAGCATCTGGACTTGGGAAGGAGATGGAGCCATCTGCG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites