CircRNA Information

General Information
circRNA Basic Information
CircID chr20:46122312|46122664
Strand -
CircType exon
Host Gene ENSG00000101017.12;
Algorism CIRI2;
Sequence CTGGAACAGAGAGACACACTGCCACCAGCACAAATACTGCGACCCCAGTGCGTGCGCTGTTGGGAAAGGGACGCTTGGGAACCGGGCTGATATTCCCGACAATGCAGCCATTCTAATTTTATGTAGCCAGGGTCTGCTCTGATTGGTTGGAGTCCGGGCTGTACTGATCATTAAATGATTTGATTGCCATCTCTACTTGGAAGAGGGTCTGAGGAAGAAAGAGCAGGCAATGTGGGGAGTGAGGCTCAGAGCATGGCCCAGCAGGGGGTTCCCATCCTTCCTGCCCTTCTCTTCTCAGACCTAGGGCTTCGGGTCCAGCAGAAGGGCACCTCAGAAACAGACACCATCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:46122312|46122664 hsa-miR-33a-5p 0 0 1
chr20:46122312|46122664 hsa-miR-33a-3p 0 0 1
chr20:46122312|46122664 hsa-miR-34a-5p 0 0 1
chr20:46122312|46122664 hsa-miR-34a-3p 0 0 1
chr20:46122312|46122664 hsa-miR-204-5p 0 0 1
chr20:46122312|46122664 hsa-miR-204-3p 0 0 1
chr20:46122312|46122664 hsa-miR-211-5p 0 0 1
chr20:46122312|46122664 hsa-miR-211-3p 0 0 1
chr20:46122312|46122664 hsa-miR-221-5p 0 0 1
chr20:46122312|46122664 hsa-miR-221-3p 0 0 1
chr20:46122312|46122664 hsa-miR-222-5p 0 0 1
chr20:46122312|46122664 hsa-miR-222-3p 0 0 1
chr20:46122312|46122664 hsa-miR-370-5p 0 0 1
chr20:46122312|46122664 hsa-miR-370-3p 0 0 1
chr20:46122312|46122664 hsa-miR-383-5p 0 0 1
chr20:46122312|46122664 hsa-miR-383-3p 0 0 1
chr20:46122312|46122664 hsa-miR-449a 1 1 1
chr20:46122312|46122664 hsa-miR-504-5p 0 0 1
chr20:46122312|46122664 hsa-miR-504-3p 0 0 1
chr20:46122312|46122664 hsa-miR-593-5p 0 0 1
chr20:46122312|46122664 hsa-miR-593-3p 0 0 1
chr20:46122312|46122664 hsa-miR-604 0 0 1
chr20:46122312|46122664 hsa-miR-33b-5p 0 0 1
chr20:46122312|46122664 hsa-miR-33b-3p 0 0 1
chr20:46122312|46122664 hsa-miR-647 0 0 1
chr20:46122312|46122664 hsa-miR-449b-5p 0 0 1
chr20:46122312|46122664 hsa-miR-449b-3p 0 0 1
chr20:46122312|46122664 hsa-miR-938 0 0 1
chr20:46122312|46122664 hsa-miR-1236-5p 0 0 1
chr20:46122312|46122664 hsa-miR-1236-3p 0 0 1
chr20:46122312|46122664 hsa-miR-1237-5p 0 0 1
chr20:46122312|46122664 hsa-miR-1237-3p 0 0 1
chr20:46122312|46122664 hsa-miR-1287-5p 0 0 1
chr20:46122312|46122664 hsa-miR-1287-3p 0 0 1
chr20:46122312|46122664 hsa-miR-1253 0 0 1
chr20:46122312|46122664 hsa-miR-1292-5p 0 0 1
chr20:46122312|46122664 hsa-miR-1292-3p 0 0 1
chr20:46122312|46122664 hsa-miR-615-5p 0 0 1
chr20:46122312|46122664 hsa-miR-671-3p 0 1 1
chr20:46122312|46122664 hsa-miR-483-3p 0 0 1
chr20:46122312|46122664 hsa-miR-34c-5p 1 1 1
chr20:46122312|46122664 hsa-miR-521 0 0 1
chr20:46122312|46122664 hsa-miR-138 0 0 1
chr20:46122312|46122664 hsa-miR-1300 0 0 1
chr20:46122312|46122664 hsa-miR-218 0 0 1
chr20:46122312|46122664 hsa-miR-612 1 0 0
chr20:46122312|46122664 hsa-miR-638 1 0 0
chr20:46122312|46122664 hsa-miR-2113 0 1 0
chr20:46122312|46122664 hsa-miR-1205 1 0 0
chr20:46122312|46122664 hsa-miR-1469 1 0 0
chr20:46122312|46122664 hsa-miR-1538 1 0 0
chr20:46122312|46122664 hsa-miR-3154 0 1 0
chr20:46122312|46122664 hsa-miR-378c 1 1 0
chr20:46122312|46122664 hsa-miR-4306 0 1 0
chr20:46122312|46122664 hsa-miR-4251 0 1 0
chr20:46122312|46122664 hsa-miR-3651 1 0 0
chr20:46122312|46122664 hsa-miR-3921 0 1 0
chr20:46122312|46122664 hsa-miR-378e 1 0 0
chr20:46122312|46122664 hsa-miR-378f 1 1 0
chr20:46122312|46122664 hsa-miR-4476 0 1 0
chr20:46122312|46122664 hsa-miR-378i 1 0 0
chr20:46122312|46122664 hsa-miR-3972 1 0 0
chr20:46122312|46122664 hsa-miR-4647 1 1 0
chr20:46122312|46122664 hsa-miR-4686 1 0 0
chr20:46122312|46122664 hsa-miR-5691 0 1 0
chr20:46122312|46122664 hsa-miR-5787 1 0 0
chr20:46122312|46122664 hsa-miR-8075 1 0 0
chr20:46122312|46122664 hsa-miR-8089 1 0 0
chr20:46122312|46122664 hsa-miR-12115 1 1 0
chr20:46122312|46122664 hsa-miR-4747-3p 1 0 0
chr20:46122312|46122664 hsa-miR-93-3p 1 0 0
chr20:46122312|46122664 hsa-miR-671-5p 1 0 0
chr20:46122312|46122664 hsa-miR-6894-5p 1 1 0
chr20:46122312|46122664 hsa-miR-16-1-3p 0 1 0
chr20:46122312|46122664 hsa-miR-3692-5p 0 1 0
chr20:46122312|46122664 hsa-miR-6757-5p 1 0 0
chr20:46122312|46122664 hsa-miR-6875-3p 0 1 0
chr20:46122312|46122664 hsa-miR-939-3p 1 0 0
chr20:46122312|46122664 hsa-miR-185-5p 0 1 0
chr20:46122312|46122664 hsa-miR-6894-3p 0 1 0
chr20:46122312|46122664 hsa-miR-6753-5p 1 0 0
chr20:46122312|46122664 hsa-miR-3074-3p 0 1 0
chr20:46122312|46122664 hsa-miR-7113-3p 1 0 0
chr20:46122312|46122664 hsa-miR-4690-5p 1 0 0
chr20:46122312|46122664 hsa-miR-6818-3p 0 1 0
chr20:46122312|46122664 hsa-miR-425-3p 1 1 0
chr20:46122312|46122664 hsa-miR-4640-3p 0 1 0
chr20:46122312|46122664 hsa-miR-6781-5p 1 0 0
chr20:46122312|46122664 hsa-miR-6499-3p 0 1 0
chr20:46122312|46122664 hsa-miR-4999-5p 0 1 0
chr20:46122312|46122664 hsa-miR-670-3p 0 1 0
chr20:46122312|46122664 hsa-miR-6832-5p 0 1 0
chr20:46122312|46122664 hsa-miR-106b-3p 1 1 0
chr20:46122312|46122664 hsa-miR-3940-3p 1 1 0
chr20:46122312|46122664 hsa-miR-6508-3p 0 1 0
chr20:46122312|46122664 hsa-miR-6886-3p 0 1 0
chr20:46122312|46122664 hsa-miR-5088-3p 0 1 0
chr20:46122312|46122664 hsa-miR-6501-3p 1 1 0
chr20:46122312|46122664 hsa-miR-10400-5p 1 0 0
chr20:46122312|46122664 hsa-miR-1207-5p 0 1 0
chr20:46122312|46122664 hsa-miR-6743-5p 0 1 0
chr20:46122312|46122664 hsa-miR-6722-3p 1 0 0
chr20:46122312|46122664 hsa-miR-6808-5p 0 1 0
chr20:46122312|46122664 hsa-miR-6879-5p 0 1 0
chr20:46122312|46122664 hsa-miR-3127-3p 1 0 0
chr20:46122312|46122664 hsa-miR-5196-5p 0 1 0
chr20:46122312|46122664 hsa-miR-6836-5p 1 0 0
chr20:46122312|46122664 hsa-miR-4632-5p 0 1 0
chr20:46122312|46122664 hsa-miR-6735-5p 0 1 0
chr20:46122312|46122664 hsa-miR-6858-5p 0 1 0
chr20:46122312|46122664 hsa-miR-4436b-3p 0 1 0
chr20:46122312|46122664 hsa-miR-3085-5p 1 1 0
chr20:46122312|46122664 hsa-miR-6758-5p 0 1 0
chr20:46122312|46122664 hsa-miR-4700-5p 1 0 0
chr20:46122312|46122664 hsa-miR-4646-5p 0 1 0
chr20:46122312|46122664 hsa-miR-378a-3p 1 0 0
chr20:46122312|46122664 hsa-miR-6724-5p 1 0 0
chr20:46122312|46122664 hsa-miR-6791-5p 1 1 0
chr20:46122312|46122664 hsa-miR-6762-5p 1 0 0
chr20:46122312|46122664 hsa-miR-6805-3p 0 1 0
chr20:46122312|46122664 hsa-miR-6810-3p 1 1 0
chr20:46122312|46122664 hsa-miR-10392-3p 1 0 0
chr20:46122312|46122664 hsa-miR-6751-3p 0 1 0
chr20:46122312|46122664 hsa-miR-6823-3p 0 1 0
chr20:46122312|46122664 hsa-miR-664a-5p 0 1 0
chr20:46122312|46122664 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr20:46122312|46122664
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence LEQRDTLPPAQILRPQCVRCWERDAWEPG
Nucleotide Sequence CTGGAACAGAGAGACACACTGCCACCAGCACAAATACTGCGACCCCAGTGCGTGCGCTGTTGGGAAAGGGACGCTTGGGAACCGGGCTGA

CircID chr20:46122312|46122664
ORF Type ORF2
Protein Length 56
Nucleotide Length 168
Protein Sequence MPSLLGRGSEEERAGNVGSEAQSMAQQGVPILPALLFSDLGLRVQQKGTSETDTIC
Nucleotide Sequence TTGCCATCTCTACTTGGAAGAGGGTCTGAGGAAGAAAGAGCAGGCAATGTGGGGAGTGAGGCTCAGAGCATGGCCCAGCAGGGGGTTCCCATCCTTCCTGCCCTTCTCTTCTCAGACCTAGGGCTTCGGGTCCAGCAGAAGGGCACCTCAGAAACAGACACCATCTGC

CircID chr20:46122312|46122664
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MEEGLRKKEQAMWGVRLRAWPSRGFPSFLPFSSQT
Nucleotide Sequence TTGGAAGAGGGTCTGAGGAAGAAAGAGCAGGCAATGTGGGGAGTGAGGCTCAGAGCATGGCCCAGCAGGGGGTTCCCATCCTTCCTGCCCTTCTCTTCTCAGACCTAG

CircID chr20:46122312|46122664
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MVSVSEVPFCWTRSPRSEKRRAGRMGTPCWAML
Nucleotide Sequence ATGGTGTCTGTTTCTGAGGTGCCCTTCTGCTGGACCCGAAGCCCTAGGTCTGAGAAGAGAAGGGCAGGAAGGATGGGAACCCCCTGCTGGGCCATGCTCTGA

CircID chr20:46122312|46122664
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MHCREYQPGSQASLSQQRTHWGRSICAGGSVSLCS
Nucleotide Sequence CTGCATTGTCGGGAATATCAGCCCGGTTCCCAAGCGTCCCTTTCCCAACAGCGCACGCACTGGGGTCGCAGTATTTGTGCTGGTGGCAGTGTGTCTCTCTGTTCC

CircID chr20:46122312|46122664
ORF Type ORF6
Protein Length 73
Nucleotide Length 222
Protein Sequence MFLRCPSAGPEALGLRREGQEGWEPPAGPCSEPHSPHCLLFLPQTLFQVEMAIKSFNDQYSPDSNQSEQTLAT
Nucleotide Sequence CTGTTTCTGAGGTGCCCTTCTGCTGGACCCGAAGCCCTAGGTCTGAGAAGAGAAGGGCAGGAAGGATGGGAACCCCCTGCTGGGCCATGCTCTGAGCCTCACTCCCCACATTGCCTGCTCTTTCTTCCTCAGACCCTCTTCCAAGTAGAGATGGCAATCAAATCATTTAATGATCAGTACAGCCCGGACTCCAACCAATCAGAGCAGACCCTGGCTACATAA

CircID chr20:46122312|46122664
ORF Type ORF7
Protein Length 57
Nucleotide Length 171
Protein Sequence MISTARTPTNQSRPWLHKIRMAALSGISARFPSVPFPTAHALGSQYLCWWQCVSLFQ
Nucleotide Sequence ATGATCAGTACAGCCCGGACTCCAACCAATCAGAGCAGACCCTGGCTACATAAAATTAGAATGGCTGCATTGTCGGGAATATCAGCCCGGTTCCCAAGCGTCCCTTTCCCAACAGCGCACGCACTGGGGTCGCAGTATTTGTGCTGGTGGCAGTGTGTCTCTCTGTTCCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites