CircRNA Information

General Information
circRNA Basic Information
CircID chr20:46350277|46350444
Strand -
CircType exon
Host Gene ENSG00000080189.13;
Algorism CIRI2;
Sequence CTGGTGACTCCCGTCCACAGCTCCCAGCTACCATGATGAGCCCTGGCGGCTTGAGCACAGTGAGTGCTGGCAGCAGGCTGGGGAGTGGCCTGCTTCTAAGCCATTTGCCCTGGCTGGTCACTGCTGCCCCTGGGCCACAAAGTACTCCTCCTCCTCATTGTCACCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:46350277|46350444 hsa-miR-184 0 0 1
chr20:46350277|46350444 hsa-miR-370-5p 0 0 1
chr20:46350277|46350444 hsa-miR-370-3p 0 0 1
chr20:46350277|46350444 hsa-miR-135b-5p 0 0 1
chr20:46350277|46350444 hsa-miR-135b-3p 0 0 1
chr20:46350277|46350444 hsa-miR-596 0 1 1
chr20:46350277|46350444 hsa-miR-765 0 1 1
chr20:46350277|46350444 hsa-miR-920 1 1 1
chr20:46350277|46350444 hsa-miR-1226-5p 0 0 1
chr20:46350277|46350444 hsa-miR-1226-3p 0 0 1
chr20:46350277|46350444 hsa-miR-1202 0 0 1
chr20:46350277|46350444 hsa-miR-663b 0 1 1
chr20:46350277|46350444 hsa-miR-1208 0 0 1
chr20:46350277|46350444 hsa-miR-486-3p 0 1 1
chr20:46350277|46350444 hsa-miR-135a 0 0 1
chr20:46350277|46350444 hsa-miR-940 1 0 0
chr20:46350277|46350444 hsa-miR-3196 1 1 0
chr20:46350277|46350444 hsa-miR-4491 0 1 0
chr20:46350277|46350444 hsa-miR-4505 1 0 0
chr20:46350277|46350444 hsa-miR-4519 0 1 0
chr20:46350277|46350444 hsa-miR-4688 1 1 0
chr20:46350277|46350444 hsa-miR-4689 1 0 0
chr20:46350277|46350444 hsa-miR-4734 1 0 0
chr20:46350277|46350444 hsa-miR-4739 1 0 0
chr20:46350277|46350444 hsa-miR-5090 0 1 0
chr20:46350277|46350444 hsa-miR-5093 1 0 0
chr20:46350277|46350444 hsa-miR-5190 0 1 0
chr20:46350277|46350444 hsa-miR-5698 1 0 0
chr20:46350277|46350444 hsa-miR-6075 1 0 0
chr20:46350277|46350444 hsa-miR-6081 1 1 0
chr20:46350277|46350444 hsa-miR-6090 1 0 0
chr20:46350277|46350444 hsa-miR-12118 1 0 0
chr20:46350277|46350444 hsa-miR-6765-5p 1 0 0
chr20:46350277|46350444 hsa-miR-7106-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6825-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6894-5p 1 0 0
chr20:46350277|46350444 hsa-miR-1236-5p 1 0 0
chr20:46350277|46350444 hsa-miR-7114-5p 0 1 0
chr20:46350277|46350444 hsa-miR-3192-5p 0 1 0
chr20:46350277|46350444 hsa-miR-6880-5p 1 0 0
chr20:46350277|46350444 hsa-miR-7847-3p 1 0 0
chr20:46350277|46350444 hsa-miR-4695-5p 1 0 0
chr20:46350277|46350444 hsa-miR-4709-3p 1 0 0
chr20:46350277|46350444 hsa-miR-770-5p 0 1 0
chr20:46350277|46350444 hsa-miR-6849-3p 0 1 0
chr20:46350277|46350444 hsa-miR-7108-5p 1 1 0
chr20:46350277|46350444 hsa-miR-3180-3p 1 0 0
chr20:46350277|46350444 hsa-miR-6798-5p 1 0 0
chr20:46350277|46350444 hsa-miR-1224-5p 1 0 0
chr20:46350277|46350444 hsa-miR-5006-5p 1 0 0
chr20:46350277|46350444 hsa-miR-3934-3p 1 0 0
chr20:46350277|46350444 hsa-miR-5088-5p 1 1 0
chr20:46350277|46350444 hsa-miR-6763-3p 0 1 0
chr20:46350277|46350444 hsa-miR-1229-5p 1 0 0
chr20:46350277|46350444 hsa-miR-542-5p 1 0 0
chr20:46350277|46350444 hsa-miR-4640-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6753-5p 1 0 0
chr20:46350277|46350444 hsa-miR-3127-5p 1 1 0
chr20:46350277|46350444 hsa-miR-6771-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6501-5p 1 0 0
chr20:46350277|46350444 hsa-miR-2681-3p 0 1 0
chr20:46350277|46350444 hsa-miR-1304-3p 0 1 0
chr20:46350277|46350444 hsa-miR-6800-5p 1 1 0
chr20:46350277|46350444 hsa-miR-6743-3p 0 1 0
chr20:46350277|46350444 hsa-miR-383-3p 0 1 0
chr20:46350277|46350444 hsa-miR-1207-5p 1 0 0
chr20:46350277|46350444 hsa-miR-1233-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6778-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6865-5p 1 1 0
chr20:46350277|46350444 hsa-miR-6775-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6726-5p 0 1 0
chr20:46350277|46350444 hsa-miR-6737-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6743-5p 1 1 0
chr20:46350277|46350444 hsa-miR-6752-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6815-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6819-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6851-5p 1 0 0
chr20:46350277|46350444 hsa-miR-11181-3p 1 1 0
chr20:46350277|46350444 hsa-miR-6722-3p 1 0 0
chr20:46350277|46350444 hsa-miR-6763-5p 1 0 0
chr20:46350277|46350444 hsa-miR-7111-5p 1 0 0
chr20:46350277|46350444 hsa-miR-10396a-5p 1 0 0
chr20:46350277|46350444 hsa-miR-10396b-5p 1 0 0
chr20:46350277|46350444 hsa-miR-328-5p 1 0 0
chr20:46350277|46350444 hsa-miR-4685-5p 1 1 0
chr20:46350277|46350444 hsa-miR-4749-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6735-5p 0 1 0
chr20:46350277|46350444 hsa-miR-6738-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6777-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6794-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6846-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6848-5p 1 1 0
chr20:46350277|46350444 hsa-miR-6858-5p 1 1 0
chr20:46350277|46350444 hsa-miR-6889-5p 1 0 0
chr20:46350277|46350444 hsa-miR-939-5p 1 0 0
chr20:46350277|46350444 hsa-miR-4758-5p 1 0 0
chr20:46350277|46350444 hsa-miR-6856-5p 1 0 0
chr20:46350277|46350444 hsa-miR-5008-3p 0 1 0
chr20:46350277|46350444 hsa-miR-4722-3p 0 1 0
chr20:46350277|46350444 hsa-miR-6893-3p 0 1 0
chr20:46350277|46350444 hsa-miR-6837-5p 0 1 0
chr20:46350277|46350444 hsa-miR-6838-5p 0 1 0
chr20:46350277|46350444 hsa-miR-6737-3p 0 1 0
chr20:46350277|46350444 hsa-miR-10523-5p 0 1 0
chr20:46350277|46350444 hsa-miR-7157-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:46350277|46350444
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MMSPGGLSTVSAGSRLGSGLLLSHLPWLVTAAPGPQSTPPPHCHL
Nucleotide Sequence ATGATGAGCCCTGGCGGCTTGAGCACAGTGAGTGCTGGCAGCAGGCTGGGGAGTGGCCTGCTTCTAAGCCATTTGCCCTGGCTGGTCACTGCTGCCCCTGGGCCACAAAGTACTCCTCCTCCTCATTGTCACCTT
CircID chr20:46350277|46350444
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MLPALTVLKPPGLIMVAGSCGRESP
Nucleotide Sequence CTGCTGCCAGCACTCACTGTGCTCAAGCCGCCAGGGCTCATCATGGTAGCTGGGAGCTGTGGACGGGAGTCACCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab