CircNet

General Information

circRNA Basic Information

CircID	chr20:47276314\|47276472
Strand	-
CircType	exon
Host Gene	ENSG00000101040.18;
Algorism	CIRI2;
Sequence	CTGTGCTCTTATCCAGGAAGTCCATGGACTCCTCGCTCGCACTGAAGTGGCTCGACGTGGCCTTCTTCTCAGCATCCTGCTCCACGTCGGAGCCCGTGTGCACAGAAGAGTTTGTGCTCATGGGGGAGCGCGGCATATCCGACAAGGAAATCCGGCGGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:47276314\|47276472	hsa-miR-148a-5p	0	0	1
chr20:47276314\|47276472	hsa-miR-148a-3p	0	0	1
chr20:47276314\|47276472	hsa-miR-152-5p	0	0	1
chr20:47276314\|47276472	hsa-miR-152-3p	0	0	1
chr20:47276314\|47276472	hsa-miR-148b-5p	0	0	1
chr20:47276314\|47276472	hsa-miR-148b-3p	0	0	1
chr20:47276314\|47276472	hsa-miR-602	0	1	1
chr20:47276314\|47276472	hsa-miR-617	0	0	1
chr20:47276314\|47276472	hsa-miR-1253	0	1	1
chr20:47276314\|47276472	hsa-miR-1261	0	0	1
chr20:47276314\|47276472	hsa-miR-1289	0	1	1
chr20:47276314\|47276472	hsa-miR-361-3p	0	0	1
chr20:47276314\|47276472	hsa-miR-502-5p	0	0	1
chr20:47276314\|47276472	hsa-miR-876-5p	0	1	1
chr20:47276314\|47276472	hsa-miR-151-5p	0	0	1
chr20:47276314\|47276472	hsa-miR-1300	0	0	1
chr20:47276314\|47276472	hsa-miR-3185	0	1	0
chr20:47276314\|47276472	hsa-miR-4251	0	1	0
chr20:47276314\|47276472	hsa-miR-4706	1	0	0
chr20:47276314\|47276472	hsa-miR-6081	1	1	0
chr20:47276314\|47276472	hsa-miR-6090	1	0	0
chr20:47276314\|47276472	hsa-miR-6165	0	1	0
chr20:47276314\|47276472	hsa-miR-6863	0	1	0
chr20:47276314\|47276472	hsa-miR-12115	1	0	0
chr20:47276314\|47276472	hsa-miR-205-3p	0	1	0
chr20:47276314\|47276472	hsa-miR-7114-5p	1	0	0
chr20:47276314\|47276472	hsa-miR-6829-5p	1	0	0
chr20:47276314\|47276472	hsa-miR-4717-5p	0	1	0
chr20:47276314\|47276472	hsa-miR-2116-3p	0	1	0
chr20:47276314\|47276472	hsa-miR-7111-5p	1	0	0
chr20:47276314\|47276472	hsa-miR-4649-5p	1	0	0
chr20:47276314\|47276472	hsa-miR-6738-5p	1	0	0
chr20:47276314\|47276472	hsa-miR-6848-5p	1	0	0
chr20:47276314\|47276472	hsa-miR-6889-5p	1	0	0
chr20:47276314\|47276472	hsa-miR-5009-5p	0	1	0
chr20:47276314\|47276472	hsa-miR-151a-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:47276314\|47276472
ORF Type	ORF1
Protein Length	27
Nucleotide Length	81
Protein Sequence	MLHVGARVHRRVCAHGGARHIRQGNPA
Nucleotide Sequence	CTGCTCCACGTCGGAGCCCGTGTGCACAGAAGAGTTTGTGCTCATGGGGGAGCGCGGCATATCCGACAAGGAAATCCGGCG

CircID	chr20:47276314\|47276472
ORF Type	ORF2
Protein Length	45
Nucleotide Length	135
Protein Sequence	MDSSLALKWLDVAFFSASCSTSEPVCTEEFVLMGERGISDKEIRR
Nucleotide Sequence	ATGGACTCCTCGCTCGCACTGAAGTGGCTCGACGTGGCCTTCTTCTCAGCATCCTGCTCCACGTCGGAGCCCGTGTGCACAGAAGAGTTTGTGCTCATGGGGGAGCGCGGCATATCCGACAAGGAAATCCGGCGG

CircID	chr20:47276314\|47276472
ORF Type	ORF3
Protein Length	35
Nucleotide Length	105
Protein Sequence	MCTRAPTWSRMLRRRPRRATSVRARSPWTSWIRAQ
Nucleotide Sequence	CTGTGCACACGGGCTCCGACGTGGAGCAGGATGCTGAGAAGAAGGCCACGTCGAGCCACTTCAGTGCGAGCGAGGAGTCCATGGACTTCCTGGATAAGAGCACAG

CircID	chr20:47276314\|47276472
ORF Type	ORF4
Protein Length	48
Nucleotide Length	144
Protein Sequence	MSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKST
Nucleotide Sequence	TTGTCGGATATGCCGCGCTCCCCCATGAGCACAAACTCTTCTGTGCACACGGGCTCCGACGTGGAGCAGGATGCTGAGAAGAAGGCCACGTCGAGCCACTTCAGTGCGAGCGAGGAGTCCATGGACTTCCTGGATAAGAGCACA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information