CircNet

General Information

circRNA Basic Information

CircID	chr20:47636348\|47636472
Strand	-
CircType	exon
Host Gene	ENSG00000124151.17;
Algorism	CIRI2;
Sequence	CAGCCCCTCTGGAGTCTCCTCCTCTACATCTGGAGGAGTATCCTCTACATCCAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:47636348\|47636472	hsa-miR-19a-5p	0	0	1
chr20:47636348\|47636472	hsa-miR-19a-3p	0	0	1
chr20:47636348\|47636472	hsa-miR-107	0	0	1
chr20:47636348\|47636472	hsa-miR-212-5p	0	0	1
chr20:47636348\|47636472	hsa-miR-212-3p	0	0	1
chr20:47636348\|47636472	hsa-miR-132-5p	0	0	1
chr20:47636348\|47636472	hsa-miR-132-3p	0	0	1
chr20:47636348\|47636472	hsa-miR-448	0	0	1
chr20:47636348\|47636472	hsa-miR-643	0	0	1
chr20:47636348\|47636472	hsa-miR-765	0	0	1
chr20:47636348\|47636472	hsa-miR-891b	0	0	1
chr20:47636348\|47636472	hsa-miR-877-5p	0	0	1
chr20:47636348\|47636472	hsa-miR-877-3p	0	0	1
chr20:47636348\|47636472	hsa-miR-942-5p	0	0	1
chr20:47636348\|47636472	hsa-miR-942-3p	0	0	1
chr20:47636348\|47636472	hsa-miR-1205	0	0	1
chr20:47636348\|47636472	hsa-miR-1250-5p	0	0	1
chr20:47636348\|47636472	hsa-miR-1250-3p	0	0	1
chr20:47636348\|47636472	hsa-miR-1279	0	0	1
chr20:47636348\|47636472	hsa-miR-1184	1	1	1
chr20:47636348\|47636472	hsa-miR-423-5p	0	0	1
chr20:47636348\|47636472	hsa-miR-525-5p	0	1	1
chr20:47636348\|47636472	hsa-miR-508-5p	0	1	1
chr20:47636348\|47636472	hsa-miR-520a-5p	0	1	1
chr20:47636348\|47636472	hsa-miR-103	0	0	1
chr20:47636348\|47636472	hsa-miR-19b	0	0	1
chr20:47636348\|47636472	hsa-miR-544	0	0	1
chr20:47636348\|47636472	hsa-miR-194	0	0	1
chr20:47636348\|47636472	hsa-miR-1185	0	0	1
chr20:47636348\|47636472	hsa-miR-3132	1	0	0
chr20:47636348\|47636472	hsa-miR-4276	1	0	0
chr20:47636348\|47636472	hsa-miR-4689	1	0	0
chr20:47636348\|47636472	hsa-miR-4739	1	0	0
chr20:47636348\|47636472	hsa-miR-4784	0	1	0
chr20:47636348\|47636472	hsa-miR-7106-5p	1	0	0
chr20:47636348\|47636472	hsa-miR-7847-3p	1	0	0
chr20:47636348\|47636472	hsa-miR-3180-3p	1	0	0
chr20:47636348\|47636472	hsa-miR-4697-3p	1	0	0
chr20:47636348\|47636472	hsa-miR-6782-5p	1	0	0
chr20:47636348\|47636472	hsa-miR-3150b-3p	0	1	0
chr20:47636348\|47636472	hsa-miR-6824-5p	1	1	0
chr20:47636348\|47636472	hsa-miR-194-5p	1	1	0
chr20:47636348\|47636472	hsa-miR-7156-3p	1	0	0
chr20:47636348\|47636472	hsa-miR-597-3p	1	0	0
chr20:47636348\|47636472	hsa-miR-4709-5p	1	0	0
chr20:47636348\|47636472	hsa-miR-1185-5p	0	1	0
chr20:47636348\|47636472	hsa-miR-6870-5p	1	0	0
chr20:47636348\|47636472	hsa-miR-202-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:47636348\|47636472
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MESPPLHLEEYPLHPICMGHCYKRSTGFCTSCCRMGIHQ
Nucleotide Sequence	CTGGAGTCTCCTCCTCTACATCTGGAGGAGTATCCTCTACATCCAATATGCATGGGTCACTGTTACAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCACCAG

CircID	chr20:47636348\|47636472
ORF Type	ORF2
Protein Length	26
Nucleotide Length	81
Protein Sequence	LVNSHSAATCAKSGASLVTVTHAYWM
Nucleotide Sequence	CTGGTGAATTCCCATTCTGCAGCAACTTGTGCAAAATCCGGTGCTTCTCTTGTAACAGTGACCCATGCATATTGGATGTAG

CircID	chr20:47636348\|47636472
ORF Type	ORF3
Protein Length	33
Nucleotide Length	99
Protein Sequence	MCKIRCFSCNSDPCILDVEDTPPDVEEETPEGL
Nucleotide Sequence	TTGTGCAAAATCCGGTGCTTCTCTTGTAACAGTGACCCATGCATATTGGATGTAGAGGATACTCCTCCAGATGTAGAGGAGGAGACTCCAGAGGGGCTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information