CircNet

General Information

circRNA Basic Information

CircID	chr20:49230324\|49233405
Strand	+
CircType	exon
Host Gene	ENSG00000124228.13;
Algorism	CIRI2;
Sequence	CTCGTCTGTCATGGTGGCCGAGAAGAGCATGGTCTGGCGGTGGTGGGAACACATTCGGATGATCTCCTTCATCTGCTCCTCAAAGTACTCATCCAGCATCCTGTCAGCCTCGTCCAGGATGAGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr20:49230324\|49233405	hsa-miR-591	0	1
chr20:49230324\|49233405	hsa-miR-942-5p	0	1
chr20:49230324\|49233405	hsa-miR-942-3p	0	1
chr20:49230324\|49233405	hsa-miR-1287-5p	0	1
chr20:49230324\|49233405	hsa-miR-1287-3p	0	1
chr20:49230324\|49233405	hsa-miR-1304-5p	0	1
chr20:49230324\|49233405	hsa-miR-1304-3p	0	1
chr20:49230324\|49233405	hsa-miR-1255a	0	1
chr20:49230324\|49233405	hsa-miR-1252-5p	0	1
chr20:49230324\|49233405	hsa-miR-1252-3p	0	1
chr20:49230324\|49233405	hsa-miR-1307-5p	0	1
chr20:49230324\|49233405	hsa-miR-1307-3p	0	1
chr20:49230324\|49233405	hsa-miR-1224-5p	0	1
chr20:49230324\|49233405	hsa-miR-485-5p	0	1
chr20:49230324\|49233405	hsa-miR-1224-3p	0	1
chr20:49230324\|49233405	hsa-miR-188-3p	0	1
chr20:49230324\|49233405	hsa-miR-220b	0	1
chr20:49230324\|49233405	hsa-miR-1260	0	1
chr20:49230324\|49233405	hsa-miR-1280	0	1
chr20:49230324\|49233405	hsa-miR-1255b	0	1
chr20:49230324\|49233405	hsa-miR-1260b	1	0
chr20:49230324\|49233405	hsa-miR-3660	1	0
chr20:49230324\|49233405	hsa-miR-3135b	1	0
chr20:49230324\|49233405	hsa-miR-4486	1	0
chr20:49230324\|49233405	hsa-miR-4533	1	0
chr20:49230324\|49233405	hsa-miR-6081	1	0
chr20:49230324\|49233405	hsa-miR-4687-3p	1	0
chr20:49230324\|49233405	hsa-miR-6741-5p	1	0
chr20:49230324\|49233405	hsa-miR-423-5p	1	0
chr20:49230324\|49233405	hsa-miR-7152-3p	1	0
chr20:49230324\|49233405	hsa-miR-1250-5p	1	0
chr20:49230324\|49233405	hsa-miR-4638-5p	1	0
chr20:49230324\|49233405	hsa-miR-1229-3p	1	0
chr20:49230324\|49233405	hsa-miR-6769b-5p	1	0
chr20:49230324\|49233405	hsa-miR-5001-5p	1	0
chr20:49230324\|49233405	hsa-miR-6846-5p	1	0
chr20:49230324\|49233405	hsa-miR-365a-5p	1	0
chr20:49230324\|49233405	hsa-miR-4667-5p	1	0
chr20:49230324\|49233405	hsa-miR-9851-5p	1	0
chr20:49230324\|49233405	hsa-miR-6884-5p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:49230324\|49233405
ORF Type	ORF1
Protein Length	31
Nucleotide Length	93
Protein Sequence	MAVVGTHSDDLLHLLLKVLIQHPVSLVQDEH
Nucleotide Sequence	CTGGCGGTGGTGGGAACACATTCGGATGATCTCCTTCATCTGCTCCTCAAAGTACTCATCCAGCATCCTGTCAGCCTCGTCCAGGATGAGCAC

CircID	chr20:49230324\|49233405
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MVAEKSMVWRWWEHIRMISFICSSKYSSSILSASSRMS
Nucleotide Sequence	ATGGTGGCCGAGAAGAGCATGGTCTGGCGGTGGTGGGAACACATTCGGATGATCTCCTTCATCTGCTCCTCAAAGTACTCATCCAGCATCCTGTCAGCCTCGTCCAGGATGAGC

CircID	chr20:49230324\|49233405
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	MDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDE
Nucleotide Sequence	CTGGACGAGGCTGACAGGATGCTGGATGAGTACTTTGAGGAGCAGATGAAGGAGATCATCCGAATGTGTTCCCACCACCGCCAGACCATGCTCTTCTCGGCCACCATGACAGACGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information