CircRNA Information

General Information
circRNA Basic Information
CircID chr20:49633748|49633960
Strand +
CircType exon
Host Gene ENSG00000158470.5;
Algorism CIRI2;
Sequence CCCCCTCCACCCTGCAACCCCCATCCCCCACCGGGCCTTTGTCCCTGCCTTGGCTTTTCTCCCCTTCTCATTCTCCTCTCCCCTTTCCTCACTGAAGGCTGTGAGTTGCTTTCAATGTGACAACACTATGATGTCATTTGGAAGGATTTGCCAGGACAGACTGATTCTGAGTCCTGGGTGCCGTATGTGTATGCGGCAGTGTTGTCAGGCGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:49633748|49633960 hsa-miR-23a-5p 0 0 1
chr20:49633748|49633960 hsa-miR-23a-3p 0 0 1
chr20:49633748|49633960 hsa-miR-23b-5p 0 0 1
chr20:49633748|49633960 hsa-miR-23b-3p 0 0 1
chr20:49633748|49633960 hsa-miR-141-5p 0 0 1
chr20:49633748|49633960 hsa-miR-141-3p 0 0 1
chr20:49633748|49633960 hsa-miR-200a-5p 0 0 1
chr20:49633748|49633960 hsa-miR-200a-3p 0 0 1
chr20:49633748|49633960 hsa-miR-488-5p 0 0 1
chr20:49633748|49633960 hsa-miR-488-3p 0 0 1
chr20:49633748|49633960 hsa-miR-489-5p 0 0 1
chr20:49633748|49633960 hsa-miR-489-3p 0 0 1
chr20:49633748|49633960 hsa-miR-622 0 0 1
chr20:49633748|49633960 hsa-miR-625-5p 0 0 1
chr20:49633748|49633960 hsa-miR-625-3p 0 0 1
chr20:49633748|49633960 hsa-miR-940 0 1 1
chr20:49633748|49633960 hsa-miR-1253 1 0 1
chr20:49633748|49633960 hsa-miR-1275 1 0 1
chr20:49633748|49633960 hsa-miR-1207-5p 1 1 1
chr20:49633748|49633960 hsa-miR-500 0 0 1
chr20:49633748|49633960 hsa-miR-1300 0 0 1
chr20:49633748|49633960 hsa-miR-549 0 0 1
chr20:49633748|49633960 hsa-miR-608 1 0 0
chr20:49633748|49633960 hsa-miR-663a 1 0 0
chr20:49633748|49633960 hsa-miR-658 1 0 0
chr20:49633748|49633960 hsa-miR-762 1 0 0
chr20:49633748|49633960 hsa-miR-765 1 1 0
chr20:49633748|49633960 hsa-miR-1268a 1 0 0
chr20:49633748|49633960 hsa-miR-3132 1 0 0
chr20:49633748|49633960 hsa-miR-3153 1 1 0
chr20:49633748|49633960 hsa-miR-3154 1 1 0
chr20:49633748|49633960 hsa-miR-3175 1 1 0
chr20:49633748|49633960 hsa-miR-548w 0 1 0
chr20:49633748|49633960 hsa-miR-4306 1 0 0
chr20:49633748|49633960 hsa-miR-4270 1 0 0
chr20:49633748|49633960 hsa-miR-4271 1 0 0
chr20:49633748|49633960 hsa-miR-4281 1 0 0
chr20:49633748|49633960 hsa-miR-3916 1 0 0
chr20:49633748|49633960 hsa-miR-1268b 1 0 0
chr20:49633748|49633960 hsa-miR-4447 1 0 0
chr20:49633748|49633960 hsa-miR-4450 1 0 0
chr20:49633748|49633960 hsa-miR-4466 1 0 0
chr20:49633748|49633960 hsa-miR-548ak 0 1 0
chr20:49633748|49633960 hsa-miR-4488 1 0 0
chr20:49633748|49633960 hsa-miR-4496 1 0 0
chr20:49633748|49633960 hsa-miR-4499 1 0 0
chr20:49633748|49633960 hsa-miR-2392 1 0 0
chr20:49633748|49633960 hsa-miR-4516 1 0 0
chr20:49633748|49633960 hsa-miR-4525 1 1 0
chr20:49633748|49633960 hsa-miR-4533 1 0 0
chr20:49633748|49633960 hsa-miR-4534 1 0 0
chr20:49633748|49633960 hsa-miR-4644 1 0 0
chr20:49633748|49633960 hsa-miR-4651 1 0 0
chr20:49633748|49633960 hsa-miR-4688 1 0 0
chr20:49633748|49633960 hsa-miR-4689 1 0 0
chr20:49633748|49633960 hsa-miR-4706 1 0 0
chr20:49633748|49633960 hsa-miR-4710 1 0 0
chr20:49633748|49633960 hsa-miR-4739 1 0 0
chr20:49633748|49633960 hsa-miR-4784 1 0 0
chr20:49633748|49633960 hsa-miR-5191 1 0 0
chr20:49633748|49633960 hsa-miR-5192 1 0 0
chr20:49633748|49633960 hsa-miR-5689 0 1 0
chr20:49633748|49633960 hsa-miR-5698 1 0 0
chr20:49633748|49633960 hsa-miR-5703 1 0 0
chr20:49633748|49633960 hsa-miR-5739 0 1 0
chr20:49633748|49633960 hsa-miR-5787 1 0 0
chr20:49633748|49633960 hsa-miR-6090 1 0 0
chr20:49633748|49633960 hsa-miR-6124 1 0 0
chr20:49633748|49633960 hsa-miR-6132 1 0 0
chr20:49633748|49633960 hsa-miR-6133 1 0 0
chr20:49633748|49633960 hsa-miR-6745 1 0 0
chr20:49633748|49633960 hsa-miR-7150 1 0 0
chr20:49633748|49633960 hsa-miR-8085 1 1 0
chr20:49633748|49633960 hsa-miR-12118 1 0 0
chr20:49633748|49633960 hsa-miR-211-3p 1 0 0
chr20:49633748|49633960 hsa-miR-4433b-3p 1 0 0
chr20:49633748|49633960 hsa-miR-92a-2-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6734-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6840-3p 0 1 0
chr20:49633748|49633960 hsa-miR-500b-3p 0 1 0
chr20:49633748|49633960 hsa-miR-6747-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6765-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3150a-3p 1 0 0
chr20:49633748|49633960 hsa-miR-7106-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6825-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6894-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6857-5p 1 0 0
chr20:49633748|49633960 hsa-miR-1972 1 0 0
chr20:49633748|49633960 hsa-miR-6799-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6510-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6728-5p 1 0 0
chr20:49633748|49633960 hsa-miR-1236-5p 1 0 0
chr20:49633748|49633960 hsa-miR-5187-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6089 1 0 0
chr20:49633748|49633960 hsa-miR-6757-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6873-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6880-5p 1 0 0
chr20:49633748|49633960 hsa-miR-7847-3p 1 0 0
chr20:49633748|49633960 hsa-miR-6746-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6730-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6890-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3622b-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6721-5p 1 0 0
chr20:49633748|49633960 hsa-miR-197-5p 1 0 0
chr20:49633748|49633960 hsa-miR-7845-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6783-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6742-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3605-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6716-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6871-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3151-5p 1 0 0
chr20:49633748|49633960 hsa-miR-1292-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3180-3p 1 0 0
chr20:49633748|49633960 hsa-miR-6748-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6732-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6798-5p 1 0 0
chr20:49633748|49633960 hsa-miR-1224-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6760-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6881-5p 1 0 0
chr20:49633748|49633960 hsa-miR-2467-3p 1 0 0
chr20:49633748|49633960 hsa-miR-6782-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3150b-3p 1 0 0
chr20:49633748|49633960 hsa-miR-6888-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6810-5p 1 0 0
chr20:49633748|49633960 hsa-miR-5008-5p 1 0 0
chr20:49633748|49633960 hsa-miR-5006-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6786-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6835-5p 1 0 0
chr20:49633748|49633960 hsa-miR-7109-5p 1 0 0
chr20:49633748|49633960 hsa-miR-1226-5p 1 0 0
chr20:49633748|49633960 hsa-miR-185-5p 1 0 0
chr20:49633748|49633960 hsa-miR-204-3p 1 0 0
chr20:49633748|49633960 hsa-miR-1229-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4783-3p 1 1 0
chr20:49633748|49633960 hsa-miR-4640-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6753-5p 1 0 0
chr20:49633748|49633960 hsa-miR-1908-5p 1 0 0
chr20:49633748|49633960 hsa-miR-92b-5p 1 0 0
chr20:49633748|49633960 hsa-miR-877-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3202 1 1 0
chr20:49633748|49633960 hsa-miR-4787-5p 1 0 0
chr20:49633748|49633960 hsa-miR-149-3p 1 0 0
chr20:49633748|49633960 hsa-miR-6824-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6878-5p 1 1 0
chr20:49633748|49633960 hsa-miR-5010-5p 1 1 0
chr20:49633748|49633960 hsa-miR-5584-5p 1 0 0
chr20:49633748|49633960 hsa-miR-423-5p 1 0 0
chr20:49633748|49633960 hsa-miR-330-3p 0 1 0
chr20:49633748|49633960 hsa-miR-6801-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3614-3p 0 1 0
chr20:49633748|49633960 hsa-miR-483-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3179 0 1 0
chr20:49633748|49633960 hsa-miR-6890-3p 0 1 0
chr20:49633748|49633960 hsa-miR-3688-5p 0 1 0
chr20:49633748|49633960 hsa-miR-1233-5p 1 0 0
chr20:49633748|49633960 hsa-miR-1273h-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4763-3p 1 1 0
chr20:49633748|49633960 hsa-miR-6769b-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6778-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6787-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6816-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6870-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6893-5p 1 1 0
chr20:49633748|49633960 hsa-miR-1343-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6737-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6743-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6752-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6754-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6756-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6769a-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6803-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6819-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6842-5p 1 0 0
chr20:49633748|49633960 hsa-miR-7107-5p 1 0 0
chr20:49633748|49633960 hsa-miR-7110-5p 1 0 0
chr20:49633748|49633960 hsa-miR-10401-5p 1 0 0
chr20:49633748|49633960 hsa-miR-11181-3p 1 0 0
chr20:49633748|49633960 hsa-miR-1249-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6722-3p 1 0 0
chr20:49633748|49633960 hsa-miR-6751-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6763-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6779-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6780a-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6788-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6797-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6808-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6879-5p 1 0 0
chr20:49633748|49633960 hsa-miR-7111-5p 1 1 0
chr20:49633748|49633960 hsa-miR-4728-5p 1 1 0
chr20:49633748|49633960 hsa-miR-5196-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6780b-5p 1 0 0
chr20:49633748|49633960 hsa-miR-10396b-5p 1 0 0
chr20:49633748|49633960 hsa-miR-10526-3p 1 1 0
chr20:49633748|49633960 hsa-miR-1237-5p 1 0 0
chr20:49633748|49633960 hsa-miR-1909-3p 1 0 0
chr20:49633748|49633960 hsa-miR-328-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4632-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4649-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4685-5p 1 1 0
chr20:49633748|49633960 hsa-miR-4701-3p 1 0 0
chr20:49633748|49633960 hsa-miR-4725-3p 1 0 0
chr20:49633748|49633960 hsa-miR-4726-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4745-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4749-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6729-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6735-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6738-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6794-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6795-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6846-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6848-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6858-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6883-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6887-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4723-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6885-5p 1 0 0
chr20:49633748|49633960 hsa-miR-939-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4758-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4769-5p 1 0 0
chr20:49633748|49633960 hsa-miR-30c-1-3p 1 0 0
chr20:49633748|49633960 hsa-miR-6731-5p 1 1 0
chr20:49633748|49633960 hsa-miR-6758-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6856-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4665-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6855-5p 1 0 0
chr20:49633748|49633960 hsa-miR-3173-3p 1 0 0
chr20:49633748|49633960 hsa-miR-4646-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4747-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6891-5p 1 0 0
chr20:49633748|49633960 hsa-miR-4472 1 1 0
chr20:49633748|49633960 hsa-miR-4716-3p 1 1 0
chr20:49633748|49633960 hsa-miR-6766-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6785-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6724-5p 1 0 0
chr20:49633748|49633960 hsa-miR-5581-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6859-5p 1 0 0
chr20:49633748|49633960 hsa-miR-6884-5p 1 0 0
chr20:49633748|49633960 hsa-miR-135a-2-3p 1 0 0
chr20:49633748|49633960 hsa-miR-548e-5p 0 1 0
chr20:49633748|49633960 hsa-miR-548j-5p 0 1 0
chr20:49633748|49633960 hsa-miR-548h-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:49633748|49633960
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MAFLPFSFSSPLSSLKAVSCFQCDNTMMSFGRICQDRLILSPGCRMCMRQCCQA
Nucleotide Sequence TTGGCTTTTCTCCCCTTCTCATTCTCCTCTCCCCTTTCCTCACTGAAGGCTGTGAGTTGCTTTCAATGTGACAACACTATGATGTCATTTGGAAGGATTTGCCAGGACAGACTGATTCTGAGTCCTGGGTGCCGTATGTGTATGCGGCAGTGTTGTCAGGCG
CircID chr20:49633748|49633960
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MQPPSPTGPLSLPWLFSPSHSPLPFPH
Nucleotide Sequence CTGCAACCCCCATCCCCCACCGGGCCTTTGTCCCTGCCTTGGCTTTTCTCCCCTTCTCATTCTCCTCTCCCCTTTCCTCACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab