CircNet

General Information

circRNA Basic Information

CircID	chr20:49635952\|49636132
Strand	-
CircType	exon
Host Gene	ENSG00000158470.5;
Algorism	CIRI2;
Sequence	GGCAGGACCACGGCAGGACCACGGCAGATCACAGTTCATCATGGGTTCTGGAGACTGCGGCTAAGACAGGATGTGGGGTAGGAGATGGGGAGAGAGCAGCGGGACAGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAGTTCCAGCGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:49635952\|49636132	hsa-miR-617	0	0	1
chr20:49635952\|49636132	hsa-miR-766-5p	0	0	1
chr20:49635952\|49636132	hsa-miR-766-3p	0	0	1
chr20:49635952\|49636132	hsa-miR-892b	0	0	1
chr20:49635952\|49636132	hsa-miR-1272	0	0	1
chr20:49635952\|49636132	hsa-miR-513b-5p	0	0	1
chr20:49635952\|49636132	hsa-miR-513b-3p	0	0	1
chr20:49635952\|49636132	hsa-miR-346	1	0	0
chr20:49635952\|49636132	hsa-miR-1913	1	0	0
chr20:49635952\|49636132	hsa-miR-1976	1	0	0
chr20:49635952\|49636132	hsa-miR-3685	1	0	0
chr20:49635952\|49636132	hsa-miR-4440	1	0	0
chr20:49635952\|49636132	hsa-miR-4510	0	1	0
chr20:49635952\|49636132	hsa-miR-6127	0	1	0
chr20:49635952\|49636132	hsa-miR-6129	0	1	0
chr20:49635952\|49636132	hsa-miR-6130	0	1	0
chr20:49635952\|49636132	hsa-miR-6133	0	1	0
chr20:49635952\|49636132	hsa-miR-6749-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-6892-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-7160-5p	1	0	0
chr20:49635952\|49636132	hsa-miR-3189-5p	1	0	0
chr20:49635952\|49636132	hsa-miR-7110-3p	0	1	0
chr20:49635952\|49636132	hsa-miR-6810-5p	1	0	0
chr20:49635952\|49636132	hsa-miR-4763-5p	1	0	0
chr20:49635952\|49636132	hsa-miR-6763-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-3186-5p	0	1	0
chr20:49635952\|49636132	hsa-miR-5001-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-3677-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-6834-5p	0	1	0
chr20:49635952\|49636132	hsa-miR-3648	1	0	0
chr20:49635952\|49636132	hsa-miR-450a-2-3p	0	1	0
chr20:49635952\|49636132	hsa-miR-3191-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-1236-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-383-3p	0	1	0
chr20:49635952\|49636132	hsa-miR-6752-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-6883-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-3162-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-4755-5p	1	0	0
chr20:49635952\|49636132	hsa-miR-365a-5p	1	1	0
chr20:49635952\|49636132	hsa-miR-365b-5p	0	1	0
chr20:49635952\|49636132	hsa-miR-6727-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-769-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-6784-3p	1	0	0
chr20:49635952\|49636132	hsa-miR-6833-3p	0	1	0
chr20:49635952\|49636132	hsa-miR-7162-5p	0	1	0
chr20:49635952\|49636132	hsa-miR-200c-5p	1	0	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:49635952\|49636132
ORF Type	ORF1
Protein Length	32
Nucleotide Length	96
Protein Sequence	MGREQRDRRLSCENRKPVLTKEVPKLTPSVPA
Nucleotide Sequence	ATGGGGAGAGAGCAGCGGGACAGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAGTTCCAGCG

CircID	chr20:49635952\|49636132
ORF Type	ORF2
Protein Length	35
Nucleotide Length	108
Protein Sequence	MAFCFHKTDVCPAALSPSPTPHPVLAAVSRTHDEL
Nucleotide Sequence	CTGGCTTTCTGTTTTCACAAGACAGACGTCTGTCCCGCTGCTCTCTCCCCATCTCCTACCCCACATCCTGTCTTAGCCGCAGTCTCCAGAACCCATGATGAACTGTGA

CircID	chr20:49635952\|49636132
ORF Type	ORF3
Protein Length	39
Nucleotide Length	120
Protein Sequence	MGTSFVSTGFLFSQDRRLSRCSLPISYPTSCLSRSLQNP
Nucleotide Sequence	TTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCTGTCCCGCTGCTCTCTCCCCATCTCCTACCCCACATCCTGTCTTAGCCGCAGTCTCCAGAACCCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information