CircNet

General Information

circRNA Basic Information

CircID	chr20:50750202\|50750530
Strand	-
CircType	exon
Host Gene	ENSG00000124171.7;
Algorism	CIRI2;
Sequence	AGCAGATTGAACCAAGCTTTGAGCCAGAGGATGAAGACAGCGAAGAAGATGACATTATCATTGAAGACAATGGAGTGCCACAGCAGATTCCAAAAGCTGTTCCTAATACTGAGAGCCTGGAGTCATTAACACAGATAGAGCTAAGCTTTGAGTCTGGACAGAATGGCTTTATTCCCTCTAATGAAGTGAGCTTAGCAGCCATAGCAAGCAGCTCAAACACGGAATTTGAAACACATGCTCCAGATCAAAAACTCTTAGAAGAAGATGGAACAATCATAACATTATGAAACCGTGGTTTGAATGTTTTCAGAGTGAGGATGCCATGAGGA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:50750202\|50750530	hsa-miR-198	0	0	1
chr20:50750202\|50750530	hsa-miR-181c-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-181c-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-136-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-136-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-149-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-149-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-135b-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-135b-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-484	0	0	1
chr20:50750202\|50750530	hsa-miR-511-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-511-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-181d-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-181d-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-558	0	0	1
chr20:50750202\|50750530	hsa-miR-569	0	1	1
chr20:50750202\|50750530	hsa-miR-570-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-570-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-604	0	0	1
chr20:50750202\|50750530	hsa-miR-607	0	0	1
chr20:50750202\|50750530	hsa-miR-626	0	0	1
chr20:50750202\|50750530	hsa-miR-639	0	0	1
chr20:50750202\|50750530	hsa-miR-647	0	1	1
chr20:50750202\|50750530	hsa-miR-659-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-659-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-888-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-888-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-877-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-877-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-543	0	0	1
chr20:50750202\|50750530	hsa-miR-330-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-508-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-409-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-508-3p	0	0	1
chr20:50750202\|50750530	hsa-miR-181a	0	0	1
chr20:50750202\|50750530	hsa-miR-181b	0	0	1
chr20:50750202\|50750530	hsa-miR-135a	0	0	1
chr20:50750202\|50750530	hsa-miR-516b	0	0	1
chr20:50750202\|50750530	hsa-miR-24	0	0	1
chr20:50750202\|50750530	hsa-miR-1826	0	0	1
chr20:50750202\|50750530	hsa-miR-219-5p	0	0	1
chr20:50750202\|50750530	hsa-miR-3155a	1	1	0
chr20:50750202\|50750530	hsa-miR-4262	0	1	0
chr20:50750202\|50750530	hsa-miR-3155b	0	1	0
chr20:50750202\|50750530	hsa-miR-4642	0	1	0
chr20:50750202\|50750530	hsa-miR-4686	0	1	0
chr20:50750202\|50750530	hsa-miR-6079	1	0	0
chr20:50750202\|50750530	hsa-miR-93-3p	0	1	0
chr20:50750202\|50750530	hsa-miR-6873-5p	0	1	0
chr20:50750202\|50750530	hsa-miR-27b-5p	0	1	0
chr20:50750202\|50750530	hsa-miR-423-3p	1	0	0
chr20:50750202\|50750530	hsa-miR-4697-3p	1	0	0
chr20:50750202\|50750530	hsa-miR-3670	1	0	0
chr20:50750202\|50750530	hsa-miR-4797-3p	1	0	0
chr20:50750202\|50750530	hsa-miR-497-3p	0	1	0
chr20:50750202\|50750530	hsa-miR-99a-3p	0	1	0
chr20:50750202\|50750530	hsa-miR-3620-5p	1	0	0
chr20:50750202\|50750530	hsa-miR-6876-3p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:50750202\|50750530
ORF Type	ORF1
Protein Length	40
Nucleotide Length	123
Protein Sequence	MNQALSQRMKTAKKMTLSLKTMECHSRFQKLFLILRAWSH
Nucleotide Sequence	TTGAACCAAGCTTTGAGCCAGAGGATGAAGACAGCGAAGAAGATGACATTATCATTGAAGACAATGGAGTGCCACAGCAGATTCCAAAAGCTGTTCCTAATACTGAGAGCCTGGAGTCATTAA

CircID	chr20:50750202\|50750530
ORF Type	ORF2
Protein Length	56
Nucleotide Length	171
Protein Sequence	MESLTQIELSFESGQNGFIPSNEVSLAAIASSSNTEFETHAPDQKLLEEDGTIITL
Nucleotide Sequence	CTGGAGTCATTAACACAGATAGAGCTAAGCTTTGAGTCTGGACAGAATGGCTTTATTCCCTCTAATGAAGTGAGCTTAGCAGCCATAGCAAGCAGCTCAAACACGGAATTTGAAACACATGCTCCAGATCAAAAACTCTTAGAAGAAGATGGAACAATCATAACATTATGA

CircID	chr20:50750202\|50750530
ORF Type	ORF3
Protein Length	28
Nucleotide Length	84
Protein Sequence	MLWHSIVFNDNVIFFAVFILWLKAWFNL
Nucleotide Sequence	CTGCTGTGGCACTCCATTGTCTTCAATGATAATGTCATCTTCTTCGCTGTCTTCATCCTCTGGCTCAAAGCTTGGTTCAATCTG

CircID	chr20:50750202\|50750530
ORF Type	ORF4
Protein Length	70
Nucleotide Length	210
Protein Sequence	MLAMAAKLTSLEGIKPFCPDSKLSSICVNDSRLSVLGTAFGICCGTPLSSMIMSSSSLSSSSGSKLGSIC
Nucleotide Sequence	CTGCTTGCTATGGCTGCTAAGCTCACTTCATTAGAGGGAATAAAGCCATTCTGTCCAGACTCAAAGCTTAGCTCTATCTGTGTTAATGACTCCAGGCTCTCAGTATTAGGAACAGCTTTTGGAATCTGCTGTGGCACTCCATTGTCTTCAATGATAATGTCATCTTCTTCGCTGTCTTCATCCTCTGGCTCAAAGCTTGGTTCAATCTGC

CircID	chr20:50750202\|50750530
ORF Type	ORF5
Protein Length	31
Nucleotide Length	96
Protein Sequence	MFHLLLRVFDLEHVFQIPCLSCLLWLLSSLH
Nucleotide Sequence	TTGTTCCATCTTCTTCTAAGAGTTTTTGATCTGGAGCATGTGTTTCAAATTCCGTGTTTGAGCTGCTTGCTATGGCTGCTAAGCTCACTTCATTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information