CircNet

General Information

circRNA Basic Information

CircID	chr20:51617490\|51625362
Strand	-
CircType	exon
Host Gene	ENSG00000054793.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCCCGCTACGTCCAGGCCAAGCTGAGTGTGCACGACCGCTCCCTCAAAGTGGCCACGGTGATCGAGAGCCTGGAGATGGAGATGGAACTGCTGTGCCTGACGGGCGTGGAGGACCAGCTGCAGGCAGATGTGCGGCCCACGCTGGAGACCCTGAGGAATGCTGGCATCAAGGGGACGGAGGCAATGACGTCAGCATGATTCAGGAATCTGACTGCGGCGTGGGAGTGGAAGGAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr20:51617490\|51625362	hsa-miR-661	1	1
chr20:51617490\|51625362	hsa-miR-663b	1	1
chr20:51617490\|51625362	hsa-miR-1270	1	1
chr20:51617490\|51625362	hsa-miR-4683	1	1
chr20:51617490\|51625362	hsa-miR-4734	1	1
chr20:51617490\|51625362	hsa-miR-1972	1	1
chr20:51617490\|51625362	hsa-miR-3692-5p	1	1
chr20:51617490\|51625362	hsa-miR-7847-3p	1	1
chr20:51617490\|51625362	hsa-miR-3677-5p	1	1
chr20:51617490\|51625362	hsa-miR-7154-3p	1	1
chr20:51617490\|51625362	hsa-miR-1273f	1	1
chr20:51617490\|51625362	hsa-miR-6514-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:51617490\|51625362
ORF Type	ORF1
Protein Length	54
Nucleotide Length	162
Protein Sequence	MPAFLRVSSVGRTSACSWSSTPVRHSSSISISRLSITVATLRERSCTLSLAWT*
Nucleotide Sequence	ATGCCAGCATTCCTCAGGGTCTCCAGCGTGGGCCGCACATCTGCCTGCAGCTGGTCCTCCACGCCCGTCAGGCACAGCAGTTCCATCTCCATCTCCAGGCTCTCGATCACCGTGGCCACTTTGAGGGAGCGGTCGTGCACACTCAGCTTGGCCTGGACGTAG

CircID	chr20:51617490\|51625362
ORF Type	ORF2
Protein Length	41
Nucleotide Length	123
Protein Sequence	MEMELLCLTGVEDQLQADVRPTLETLRNAGIKGTEAMTSA*
Nucleotide Sequence	ATGGAGATGGAACTGCTGTGCCTGACGGGCGTGGAGGACCAGCTGCAGGCAGATGTGCGGCCCACGCTGGAGACCCTGAGGAATGCTGGCATCAAGGGGACGGAGGCAATGACGTCAGCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr20:51617490\|51625362	NOP56	1	0	0
chr20:51617490\|51625362	ELAVL1	0	0	2
chr20:51617490\|51625362	SF3B4	2	0	1
chr20:51617490\|51625362	PRPF8	0	2	1
chr20:51617490\|51625362	YTHDF1	0	0	1
chr20:51617490\|51625362	TAF15	0	1	0
chr20:51617490\|51625362	FMR1	0	0	4
chr20:51617490\|51625362	FUS	1	1	0
chr20:51617490\|51625362	SRSF1	0	2	4
chr20:51617490\|51625362	U2AF2	0	5	0
chr20:51617490\|51625362	DDX54	0	0	2
chr20:51617490\|51625362	RBM10	1	0	0
chr20:51617490\|51625362	HNRNPC	0	1	0
chr20:51617490\|51625362	LARP7	0	0	1
chr20:51617490\|51625362	SMNDC1	1	0	0
chr20:51617490\|51625362	LIN28B	0	0	1
chr20:51617490\|51625362	IGF2BP3	0	0	2
chr20:51617490\|51625362	IGF2BP2	0	0	3
chr20:51617490\|51625362	BUD13	0	1	0
chr20:51617490\|51625362	FBL	2	0	1
chr20:51617490\|51625362	EIF4A3	2	2	3
chr20:51617490\|51625362	AGO2	0	2	0

CircRNA Information