CircNet

General Information

circRNA Basic Information

CircID	chr20:53576357\|53576528
Strand	+
CircType	exon
Host Gene	ENSG00000171940.12;
Algorism	CIRI2;
Sequence	AAGTCCTTGCTTAGAAGTCGACGTACCGGATGCCCGCCAGCGTTGCTGGGAAAAGATGTGCCTCCCCTCTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAGCCCTCCTGGGCCAGGCAAGGCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:53576357\|53576528	hsa-miR-629-5p	0	0	1
chr20:53576357\|53576528	hsa-miR-629-3p	0	0	1
chr20:53576357\|53576528	hsa-miR-635	0	0	1
chr20:53576357\|53576528	hsa-miR-650	0	0	1
chr20:53576357\|53576528	hsa-miR-661	0	0	1
chr20:53576357\|53576528	hsa-miR-665	0	0	1
chr20:53576357\|53576528	hsa-miR-760	0	0	1
chr20:53576357\|53576528	hsa-miR-1288-5p	0	0	1
chr20:53576357\|53576528	hsa-miR-1288-3p	0	0	1
chr20:53576357\|53576528	hsa-miR-299-5p	0	0	1
chr20:53576357\|53576528	hsa-miR-1207-5p	1	0	1
chr20:53576357\|53576528	hsa-miR-516a-3p	0	0	1
chr20:53576357\|53576528	hsa-miR-1269	0	0	1
chr20:53576357\|53576528	hsa-miR-1254	0	0	1
chr20:53576357\|53576528	hsa-miR-663	0	0	1
chr20:53576357\|53576528	hsa-miR-762	1	0	0
chr20:53576357\|53576528	hsa-miR-1268a	1	0	0
chr20:53576357\|53576528	hsa-miR-1269a	0	1	0
chr20:53576357\|53576528	hsa-miR-2861	1	0	0
chr20:53576357\|53576528	hsa-miR-3153	0	1	0
chr20:53576357\|53576528	hsa-miR-1268b	1	0	0
chr20:53576357\|53576528	hsa-miR-378g	1	0	0
chr20:53576357\|53576528	hsa-miR-4498	1	0	0
chr20:53576357\|53576528	hsa-miR-1269b	0	1	0
chr20:53576357\|53576528	hsa-miR-1587	1	0	0
chr20:53576357\|53576528	hsa-miR-4674	1	0	0
chr20:53576357\|53576528	hsa-miR-4706	1	0	0
chr20:53576357\|53576528	hsa-miR-4739	1	0	0
chr20:53576357\|53576528	hsa-miR-5787	1	0	0
chr20:53576357\|53576528	hsa-miR-6133	1	0	0
chr20:53576357\|53576528	hsa-miR-7977	0	1	0
chr20:53576357\|53576528	hsa-miR-8072	1	0	0
chr20:53576357\|53576528	hsa-miR-3194-3p	0	1	0
chr20:53576357\|53576528	hsa-miR-6799-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-6757-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-4722-5p	0	1	0
chr20:53576357\|53576528	hsa-miR-1915-5p	0	1	0
chr20:53576357\|53576528	hsa-miR-6728-3p	0	1	0
chr20:53576357\|53576528	hsa-miR-7109-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-6740-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-4738-3p	1	0	0
chr20:53576357\|53576528	hsa-miR-6824-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-4529-3p	0	1	0
chr20:53576357\|53576528	hsa-miR-6792-5p	0	1	0
chr20:53576357\|53576528	hsa-miR-4771	0	1	0
chr20:53576357\|53576528	hsa-miR-4763-3p	1	1	0
chr20:53576357\|53576528	hsa-miR-6865-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-6756-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-6774-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-6779-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-3127-3p	0	1	0
chr20:53576357\|53576528	hsa-miR-3620-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-4728-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-5196-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-328-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-4745-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-6758-5p	1	1	0
chr20:53576357\|53576528	hsa-miR-6856-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-1914-3p	1	0	0
chr20:53576357\|53576528	hsa-miR-6855-5p	1	0	0
chr20:53576357\|53576528	hsa-miR-4747-5p	0	1	0
chr20:53576357\|53576528	hsa-miR-6733-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:53576357\|53576528
ORF Type	ORF1
Protein Length	55
Nucleotide Length	165
Protein Sequence	MLRSRRTGCPPALLGKDVPPLSSFCKPKPKSAFPAQSKSLPSAKGKQSPPGPGKA
Nucleotide Sequence	TTGCTTAGAAGTCGACGTACCGGATGCCCGCCAGCGTTGCTGGGAAAAGATGTGCCTCCCCTCTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAGCCCTCCTGGGCCAGGCAAGGCC

CircID	chr20:53576357\|53576528
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MCLPSLVSVNPSPSLLSRRSPNPCHLRRGSRALLGQARP
Nucleotide Sequence	ATGTGCCTCCCCTCTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAGCCCTCCTGGGCCAGGCAAGGCCC

CircID	chr20:53576357\|53576528
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	MAQEGSASPSQMAGIWTAPGKQTWAWVYRN
Nucleotide Sequence	CTGGCCCAGGAGGGCTCTGCTTCCCCTTCGCAGATGGCAGGGATTTGGACTGCGCCGGGAAAGCAGACTTGGGCTTGGGTTTACAGAAACTAG

CircID	chr20:53576357\|53576528
ORF Type	ORF4
Protein Length	49
Nucleotide Length	147
Protein Sequence	MLPLRRWQGFGLRRESRLGLGFTETREGRHIFSQQRWRASGTSTSKQGL
Nucleotide Sequence	CTGCTTCCCCTTCGCAGATGGCAGGGATTTGGACTGCGCCGGGAAAGCAGACTTGGGCTTGGGTTTACAGAAACTAGAGAGGGGAGGCACATCTTTTCCCAGCAACGCTGGCGGGCATCCGGTACGTCGACTTCTAAGCAAGGACTT

CircID	chr20:53576357\|53576528
ORF Type	ORF5
Protein Length	55
Nucleotide Length	165
Protein Sequence	MPGPGGLCFPFADGRDLDCAGKADLGLGLQKLERGGTSFPSNAGGHPVRRLLSKD
Nucleotide Sequence	TTGCCTGGCCCAGGAGGGCTCTGCTTCCCCTTCGCAGATGGCAGGGATTTGGACTGCGCCGGGAAAGCAGACTTGGGCTTGGGTTTACAGAAACTAGAGAGGGGAGGCACATCTTTTCCCAGCAACGCTGGCGGGCATCCGGTACGTCGACTTCTAAGCAAGGAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information